RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 SLC35E1Q96K37 410 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 PRDM13Q9H4Q3 707 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 RYDENQ9NUL5 291 aaKnown RBP10.58□□□□□ -0.72
BDNF-218ENST00000533246 NAGKQ9UJ70 344 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 GPR132Q9UNW8 380 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 FBLL1A6NHQ2 334 aaKnown RBP10.58□□□□□ -0.72
BDNF-218ENST00000533246 TRDCB7Z8K6 153 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 FSTP19883 344 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 NTF3P20783 257 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 MST1P26927 711 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 MPGP29372 298 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.58□□□□□ -0.72
BDNF-218ENST00000533246 MPC1Q9Y5U8 109 aa10.58□□□□□ -0.72
BDNF-218ENST00000533246 SYNGR2O43760 224 aa10.57□□□□□ -0.72
BDNF-218ENST00000533246 CYC1P08574 325 aa10.57□□□□□ -0.72
BDNF-218ENST00000533246 FOLR2P14207 255 aa10.57□□□□□ -0.72
BDNF-218ENST00000533246 CXorf66Q5JRM2 361 aaPredicted RBP10.57□□□□□ -0.72
BDNF-218ENST00000533246 FFAR4Q5NUL3 377 aa10.57□□□□□ -0.72
BDNF-218ENST00000533246 ACSM6Q6P461 480 aa10.57□□□□□ -0.72
BDNF-218ENST00000533246 FAM181AQ8N9Y4 354 aa10.57□□□□□ -0.72
BDNF-218ENST00000533246 NMES1Q9C002 83 aa10.57□□□□□ -0.72
BDNF-218ENST00000533246 LPAR2Q9HBW0 351 aa10.57□□□□□ -0.72
BDNF-218ENST00000533246 MAP1LC3B2A6NCE7 125 aa10.57□□□□□ -0.72
BDNF-218ENST00000533246 ZNF207O43670 478 aaKnown RBP10.57□□□□□ -0.72
BDNF-218ENST00000533246 CHRNA7P36544 502 aa10.57□□□□□ -0.72
BDNF-218ENST00000533246 UNC119Q13432 240 aa10.57□□□□□ -0.72
BDNF-218ENST00000533246 FBXW9Q5XUX1 488 aa10.57□□□□□ -0.72
BDNF-218ENST00000533246 MAP1LC3BQ9GZQ8 125 aa10.57□□□□□ -0.72
BDNF-218ENST00000533246 NPDC1Q9NQX5 325 aaPredicted RBP10.57□□□□□ -0.72
BDNF-218ENST00000533246 ZNF891A8MT65 544 aaPredicted RBP10.57□□□□□ -0.72
BDNF-218ENST00000533246 PSG2P11465 335 aa10.57□□□□□ -0.72
BDNF-218ENST00000533246 FGF5P12034 268 aa10.57□□□□□ -0.72
BDNF-218ENST00000533246 CEBPDP49716 269 aaPredicted RBP10.57□□□□□ -0.72
BDNF-218ENST00000533246 JOSD1Q15040 202 aaPredicted RBP10.57□□□□□ -0.72
BDNF-218ENST00000533246 ACOT6Q3I5F7 207 aaPredicted RBP10.57□□□□□ -0.72
BDNF-218ENST00000533246 C5orf66Q9H5L9 145 aa10.57□□□□□ -0.72
BDNF-218ENST00000533246 ZFP30Q9Y2G7 519 aa10.57□□□□□ -0.72
BDNF-218ENST00000533246 COL4A6Q14031 1691 aa10.57□□□□□ -0.72
BDNF-218ENST00000533246 IGHV3OR15-7A0A075B7D8 119 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 TGIF2-C20orf24A0A0A6YYL0 155 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 M0QZ24 198 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 LYPD3O95274 346 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 COX6A1P12074 109 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 PPP1CCP36873 323 aaKnown RBP10.56□□□□□ -0.72
BDNF-218ENST00000533246 Q8IYB0 196 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 SIGLECL1Q8N7X8 197 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 OR10W1Q8NGF6 305 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 CMTM2Q8TAZ6 248 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 BORCS7Q96B45 105 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 CLUHP3Q96NS8 147 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 WDR90Q96KV7 1748 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 TMPRSS2O15393 492 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 ISG15P05161 165 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 PMELP40967 661 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 SMAGPQ0VAQ4 97 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 IL13RA2Q14627 380 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 VWA1Q6PCB0 445 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 MOGAT3Q86VF5 341 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 RAB40CQ96S21 281 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 PTPRDP23468 1912 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 A0A0G2JMM0 328 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 A0A1W2PPB8 328 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 A0A1W2PRS3 328 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 KIR3DP1A8MWS1 328 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 APELAP0DMC3 54 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 G6PCP35575 357 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 RBM11P57052 281 aaKnown RBP10.56□□□□□ -0.72
BDNF-218ENST00000533246 EWSR1Q01844 656 aaKnown RBP eCLIP10.56□□□□□ -0.72
BDNF-218ENST00000533246 LINC00114Q6XXX2 140 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 MOB1BQ7L9L4 216 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 SLC35D1Q9NTN3 355 aa10.56□□□□□ -0.72
BDNF-218ENST00000533246 A0A0U1RQV5 110 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 RTL8BQ17RB0 113 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 OR5R1Q8NH85 324 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 SSMEM1Q8WWF3 244 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 RALYQ9UKM9 306 aaKnown RBP10.55□□□□□ -0.72
BDNF-218ENST00000533246 FAM90A27PA6NNH2 459 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 ZNF17P17021 662 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 HOXA6P31267 233 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 CDKN1BP46527 198 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 DLK1P80370 383 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 TNFAIP6P98066 277 aaPredicted RBP10.55□□□□□ -0.72
BDNF-218ENST00000533246 EFNB1P98172 346 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 TPTE2P1Q5T6R2 138 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 OR5A2Q8NGI9 324 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 PTX4Q96A99 478 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 STARD4Q96DR4 205 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 MYO18BQ8IUG5 2567 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 CSPG4Q6UVK1 2322 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 SERTM2A0A1B0GWG4 89 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 J3QT63 122 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 HAND1O96004 215 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 ATP6V0CP27449 155 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 ERHP84090 104 aaKnown RBP10.55□□□□□ -0.72
BDNF-218ENST00000533246 TIGITQ495A1 244 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 MOB3BQ86TA1 216 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 AQP3Q92482 292 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 PIPOXQ9P0Z9 390 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 HIST1H2BKO60814 126 aa10.55□□□□□ -0.72
BDNF-218ENST00000533246 GOSR1O95249 250 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms