RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 DPAGT1Q9H3H5 408 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 GHITMQ9H3K2 345 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 NECAP2Q9NVZ3 263 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 RDH8Q9NYR8 311 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 ZNRD1Q9P1U0 126 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 COPZ2Q9P299 210 aa9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 FN1P02751 2386 aaKnown RBP9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 NSD1Q96L73 2696 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC4-211ENST00000533012 BTBD17A6NE02 478 aa9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 GABARAPH6UMI1 98 aa9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 SLC31A2O15432 143 aa9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 HOXA3O43365 443 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 GAPDHP04406 335 aaKnown RBP9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 NAT1P18440 290 aa9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 OR3A3P47888 321 aa9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 HILS1P60008 231 aa9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 AANATQ16613 207 aa9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 ZNF57Q68EA5 555 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 CCDC144NLQ6NUI1 221 aa9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 AKAP14Q86UN6 197 aa9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 LDLRAD3Q86YD5 345 aa9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 LYG1Q8N1E2 194 aa9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 DYNAPQ8N1N2 210 aa9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 OR5AP2Q8NGF4 316 aa9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 OR52I2Q8NH67 350 aa9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 SSMEM1Q8WWF3 244 aa9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 SSX3Q99909 188 aa9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 C11orf54Q9H0W9 315 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 PIPOXQ9P0Z9 390 aa9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 RBM7Q9Y580 266 aaKnown RBP9.09□□□□□ -0.95
TRAPPC4-211ENST00000533012 MXRA5Q9NR99 2828 aa9.09□□□□□ -0.96
TRAPPC4-211ENST00000533012 FAM240BA0A1B0GVZ2 78 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 RAB29O14966 203 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 ST8SIA5O15466 376 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 LYRM1O43325 122 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 GSTZ1O43708 216 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 PAX6P26367 422 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 BRS3P32247 399 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 RCVRNP35243 200 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 IER3P46695 156 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 TAS2R46P59540 309 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 BAK1Q16611 211 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 LRRC75BQ2VPJ9 315 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 PLA1AQ53H76 456 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 RNASE12Q5GAN4 147 aaKnown RBP9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 H1FOOQ8IZA3 346 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 TMEM86BQ8N661 226 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 OR5H2Q8NGV7 314 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 SNAPC3Q92966 411 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 TOMM40LQ969M1 308 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 KLK11Q9UBX7 282 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 MTFP1Q9UDX5 166 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 ZNF221Q9UK13 617 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 RNF150Q9ULK6 438 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 TBC1D24Q9ULP9 559 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 ANAPC10Q9UM13 185 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 POMT1Q9Y6A1 747 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 KIAA2026Q5HYC2 2103 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 DSCAML1Q8TD84 2053 aa9.08□□□□□ -0.96
TRAPPC4-211ENST00000533012 NAP1L6A6NFF2 107 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 CLDN34H7C241 214 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 TRIM77I1YAP6 450 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 HSD17B6O14756 317 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 IGHV4-59P01825 116 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 PMP2P02689 132 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 OR8U9P0C7N5 309 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 OR5H8P0DN80 308 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 NFYAP23511 347 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 HLA-DMAP28067 261 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 FCGR2CP31995 323 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 DYNLT3P51808 116 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 ZNF137PP52743 207 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 RAB25P57735 213 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 ACTBP60709 375 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 ACTG1P63261 375 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 DGCR2P98153 550 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 SSBP1Q04837 148 aaKnown RBP9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 ZNF816Q0VGE8 651 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 CDK10Q15131 360 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 SLC9A3R2Q15599 337 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 TGIF2LXQ8IUE1 241 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 CADM3Q8N126 398 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 OR8H3Q8N146 312 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 TOMM5Q8N4H5 51 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 ZDHHC22Q8N966 263 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 OR8U1Q8NH10 309 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 OR5R1Q8NH85 324 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 FAM216AQ8WUB2 273 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 ST6GALNAC6Q969X2 333 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 ABHD14BQ96IU4 210 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 S1PR3Q99500 378 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 AGMATQ9BSE5 352 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 THAP7Q9BT49 309 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 PARP12Q9H0J9 701 aaKnown RBP9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 IFI27L2Q9H2X8 130 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 TNFRSF19Q9NS68 423 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 OR2W1Q9Y3N9 320 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 NAV3Q8IVL0 2385 aa9.07□□□□□ -0.96
TRAPPC4-211ENST00000533012 DNAJC9-AS1A6NH13 148 aa9.06□□□□□ -0.96
TRAPPC4-211ENST00000533012 ZNF736B4DX44 427 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms