RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 PSMB11A5LHX3 300 aa14.95□□□□□ -0.02
SSH3-209ENST00000532600 METTL21EPA6NDL7 271 aa14.95□□□□□ -0.02
SSH3-209ENST00000532600 IGHG2P01859 326 aa14.95□□□□□ -0.02
SSH3-209ENST00000532600 HBZP02008 142 aa14.95□□□□□ -0.02
SSH3-209ENST00000532600 GAPDHP04406 335 aaKnown RBP14.95□□□□□ -0.02
SSH3-209ENST00000532600 ZNF880Q6PDB4 577 aa14.95□□□□□ -0.02
SSH3-209ENST00000532600 ETV3LQ6ZN32 361 aa14.95□□□□□ -0.02
SSH3-209ENST00000532600 SLC25A48Q6ZT89 311 aaKnown RBP14.95□□□□□ -0.02
SSH3-209ENST00000532600 OR10V1Q8NGI7 309 aa14.95□□□□□ -0.02
SSH3-209ENST00000532600 KCTD12Q96CX2 325 aaKnown RBP14.95□□□□□ -0.02
SSH3-209ENST00000532600 PLSCR3Q9NRY6 295 aa14.95□□□□□ -0.02
SSH3-209ENST00000532600 AURKAIP1Q9NWT8 199 aaPredicted RBP14.95□□□□□ -0.02
SSH3-209ENST00000532600 TRAPPC2LQ9UL33 140 aa14.95□□□□□ -0.02
SSH3-209ENST00000532600 A0A075B6Q4 140 aa14.94□□□□□ -0.02
SSH3-209ENST00000532600 EIF4EP06730 217 aaKnown RBP14.94□□□□□ -0.02
SSH3-209ENST00000532600 PF4V1P10720 104 aa14.94□□□□□ -0.02
SSH3-209ENST00000532600 ZNF182P17025 639 aaPredicted RBP14.94□□□□□ -0.02
SSH3-209ENST00000532600 ZNF137PP52743 207 aa14.94□□□□□ -0.02
SSH3-209ENST00000532600 GNMTQ14749 295 aa14.94□□□□□ -0.02
SSH3-209ENST00000532600 Q3ZCU0 254 aa14.94□□□□□ -0.02
SSH3-209ENST00000532600 FOXB2Q5VYV0 432 aa14.94□□□□□ -0.02
SSH3-209ENST00000532600 SAMD12Q8N8I0 201 aa14.94□□□□□ -0.02
SSH3-209ENST00000532600 Q8N9W7 124 aa14.94□□□□□ -0.02
SSH3-209ENST00000532600 ABCG5Q9H222 651 aa14.94□□□□□ -0.02
SSH3-209ENST00000532600 NECAP2Q9NVZ3 263 aa14.94□□□□□ -0.02
SSH3-209ENST00000532600 COMMD3Q9UBI1 195 aa14.94□□□□□ -0.02
SSH3-209ENST00000532600 TRBV6-6A0A0A6YYG2 114 aa14.93□□□□□ -0.02
SSH3-209ENST00000532600 DPPA5A6NC42 116 aa14.93□□□□□ -0.02
SSH3-209ENST00000532600 CD33P20138 364 aa14.93□□□□□ -0.02
SSH3-209ENST00000532600 ZNF260Q3ZCT1 412 aa14.93□□□□□ -0.02
SSH3-209ENST00000532600 CDNFQ49AH0 187 aa14.93□□□□□ -0.02
SSH3-209ENST00000532600 UBE2NLQ5JXB2 153 aa14.93□□□□□ -0.02
SSH3-209ENST00000532600 C6orf183Q5T699 404 aa14.93□□□□□ -0.02
SSH3-209ENST00000532600 PRR18Q8N4B5 295 aa14.93□□□□□ -0.02
SSH3-209ENST00000532600 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.93□□□□□ -0.02
SSH3-209ENST00000532600 SERPINE3A8MV23 424 aa14.92□□□□□ -0.02
SSH3-209ENST00000532600 SPINT2O43291 252 aa14.92□□□□□ -0.02
SSH3-209ENST00000532600 NOL3O60936 208 aaKnown RBP14.92□□□□□ -0.02
SSH3-209ENST00000532600 CD1BP29016 333 aa14.92□□□□□ -0.02
SSH3-209ENST00000532600 HMGN3Q15651 99 aa14.92□□□□□ -0.02
SSH3-209ENST00000532600 KHDC1LQ5JSQ8 128 aa14.92□□□□□ -0.02
SSH3-209ENST00000532600 REC114Q7Z4M0 266 aa14.92□□□□□ -0.02
SSH3-209ENST00000532600 SLC35E3Q7Z769 313 aa14.92□□□□□ -0.02
SSH3-209ENST00000532600 TGIF2LXQ8IUE1 241 aa14.92□□□□□ -0.02
SSH3-209ENST00000532600 ODF3L1Q8IXM7 274 aa14.92□□□□□ -0.02
SSH3-209ENST00000532600 OR52L2PQ8NGH6 319 aa14.92□□□□□ -0.02
SSH3-209ENST00000532600 CMSS1Q9BQ75 279 aaKnown RBP14.92□□□□□ -0.02
SSH3-209ENST00000532600 TAF9BQ9HBM6 251 aa14.92□□□□□ -0.02
SSH3-209ENST00000532600 C12orf4Q9NQ89 552 aa14.92□□□□□ -0.02
SSH3-209ENST00000532600 CCDC59Q9P031 241 aaKnown RBP14.92□□□□□ -0.02
SSH3-209ENST00000532600 GNG12Q9UBI6 72 aa14.92□□□□□ -0.02
SSH3-209ENST00000532600 RSL24D1Q9UHA3 163 aaKnown RBP14.92□□□□□ -0.02
SSH3-209ENST00000532600 TRAV18A0A075B6X5 111 aa14.91□□□□□ -0.02
SSH3-209ENST00000532600 TMEM235A6NFC5 223 aa14.91□□□□□ -0.02
SSH3-209ENST00000532600 CCDC160A6NGH7 325 aa14.91□□□□□ -0.02
SSH3-209ENST00000532600 SSX5O60225 188 aa14.91□□□□□ -0.02
SSH3-209ENST00000532600 HPGDSO60760 199 aa14.91□□□□□ -0.02
SSH3-209ENST00000532600 PTHLHP12272 177 aa14.91□□□□□ -0.02
SSH3-209ENST00000532600 GPR12P47775 334 aa14.91□□□□□ -0.02
SSH3-209ENST00000532600 RPL23AP62750 156 aaKnown RBP14.91□□□□□ -0.02
SSH3-209ENST00000532600 MORN2Q502X0 79 aa14.91□□□□□ -0.02
SSH3-209ENST00000532600 STPG2Q8N412 459 aa14.91□□□□□ -0.02
SSH3-209ENST00000532600 LINC00482Q8N8I6 264 aa14.91□□□□□ -0.02
SSH3-209ENST00000532600 OR2T10Q8NGZ9 312 aa14.91□□□□□ -0.02
SSH3-209ENST00000532600 CHPT1Q8WUD6 406 aa14.91□□□□□ -0.02
SSH3-209ENST00000532600 ACOT12Q8WYK0 555 aa14.91□□□□□ -0.02
SSH3-209ENST00000532600 SLIRPQ9GZT3 109 aaKnown RBP14.91□□□□□ -0.02
SSH3-209ENST00000532600 MIXL1Q9H2W2 232 aa14.91□□□□□ -0.02
SSH3-209ENST00000532600 CHMP1AQ9HD42 196 aaPredicted RBP14.91□□□□□ -0.02
SSH3-209ENST00000532600 Q9N2K0 584 aa14.91□□□□□ -0.02
SSH3-209ENST00000532600 MOSP00540 346 aa14.9□□□□□ -0.02
SSH3-209ENST00000532600 PF4P02776 101 aa14.9□□□□□ -0.02
SSH3-209ENST00000532600 ELK1P19419 428 aa14.9□□□□□ -0.02
SSH3-209ENST00000532600 IL3RAP26951 378 aa14.9□□□□□ -0.02
SSH3-209ENST00000532600 F2RL1P55085 397 aa14.9□□□□□ -0.02
SSH3-209ENST00000532600 KRTAP10-11P60412 298 aa14.9□□□□□ -0.02
SSH3-209ENST00000532600 TMEM30BQ3MIR4 351 aa14.9□□□□□ -0.02
SSH3-209ENST00000532600 HACD4Q5VWC8 232 aa14.9□□□□□ -0.02
SSH3-209ENST00000532600 SETD6Q8TBK2 473 aa14.9□□□□□ -0.02
SSH3-209ENST00000532600 NUDCD2Q8WVJ2 157 aa14.9□□□□□ -0.02
SSH3-209ENST00000532600 MAFIPQ8WZ33 124 aa14.9□□□□□ -0.02
SSH3-209ENST00000532600 S1PR3Q99500 378 aa14.9□□□□□ -0.02
SSH3-209ENST00000532600 RIMS4Q9H426 269 aaPredicted RBP14.9□□□□□ -0.02
SSH3-209ENST00000532600 LIN7CQ9NUP9 197 aaKnown RBP14.9□□□□□ -0.02
SSH3-209ENST00000532600 ZNF230Q9UIE0 474 aaPredicted RBP14.9□□□□□ -0.02
SSH3-209ENST00000532600 IGKV1D-8A0A087WSZ0 117 aa14.89□□□□□ -0.03
SSH3-209ENST00000532600 A0A0A6YYH2 397 aa14.89□□□□□ -0.03
SSH3-209ENST00000532600 A6NJ64 397 aa14.89□□□□□ -0.03
SSH3-209ENST00000532600 NCBP2LA6PVI3 153 aaKnown RBP14.89□□□□□ -0.03
SSH3-209ENST00000532600 ZNF701M0R085 212 aaPredicted RBP14.89□□□□□ -0.03
SSH3-209ENST00000532600 CTDSP2O14595 271 aa14.89□□□□□ -0.03
SSH3-209ENST00000532600 XRCC3O43542 346 aa14.89□□□□□ -0.03
SSH3-209ENST00000532600 SCGNO76038 276 aa14.89□□□□□ -0.03
SSH3-209ENST00000532600 FCGR3AP08637 254 aa14.89□□□□□ -0.03
SSH3-209ENST00000532600 GSTP1P09211 210 aaKnown RBP14.89□□□□□ -0.03
SSH3-209ENST00000532600 CD3GP09693 182 aa14.89□□□□□ -0.03
SSH3-209ENST00000532600 PPP1CCP36873 323 aaKnown RBP14.89□□□□□ -0.03
SSH3-209ENST00000532600 TRAT1Q6PIZ9 186 aa14.89□□□□□ -0.03
SSH3-209ENST00000532600 MRPL41Q8IXM3 137 aaKnown RBP14.89□□□□□ -0.03
SSH3-209ENST00000532600 FAM71E2Q8N5Q1 922 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms