RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 FAM78BQ5VT40 261 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 ACSM6Q6P461 480 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 OR10D4PQ8NGN7 298 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 OR1L4Q8NGR5 311 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 OR2T6Q8NHC8 308 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 GPR146Q96CH1 333 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 NDFIP1Q9BT67 221 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 LYRM2Q9NU23 88 aaPredicted RBP13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 AP4M1O00189 453 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 NAT2P11245 290 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 ZNF273Q14593 569 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 OR5P3Q8WZ94 311 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 IL22RA2Q969J5 263 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 TUBD1Q9UJT1 453 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 MRPS18CQ9Y3D5 142 aaKnown RBP13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 RAB29O14966 203 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 CLPSP04118 112 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 CLEC3BP05452 202 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 FABP4P15090 132 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 CEBPDP49716 269 aaPredicted RBP13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 B2MP61769 119 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 AARDQ4LEZ3 155 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 CALHM1Q8IU99 346 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 FGFRL1Q8N441 504 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 ZNF645Q8N7E2 425 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 ITLN1Q8WWA0 313 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 RSG1Q9BU20 258 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 TECRQ9NZ01 308 aaKnown RBP13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 DOK5Q9P104 306 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 EP400Q96L91 3159 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 A0A1W2PPE3 182 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 ZNF818PQ6ZRF7 136 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 Q6ZT83 130 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 OR10S1Q8NGN2 331 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 ABHD14AQ9BUJ0 271 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 SIRT7Q9NRC8 400 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 ROS1P08922 2347 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 CACNA1HO95180 2353 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 PHOX2AO14813 284 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 SIGLEC5O15389 551 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 EFNA2O43921 213 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 PAGE4O60829 102 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 RD3LP0DJH9 198 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 FDCSPQ8NFU4 85 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 OR2T10Q8NGZ9 312 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 FLYWCH2Q96CP2 140 aaKnown RBP13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 SNX22Q96L94 193 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 C1QTNF5Q9BXJ0 243 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 XKRY2A2RUG3 117 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 UBE2L3P68036 154 aaKnown RBP13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 TNXAQ16473 311 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 RNF2Q99496 336 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 PPIAL4EA0A075B759 164 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 PPIAL4DF5H284 164 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 PPIAL4FP0DN26 164 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 CCL1P22362 96 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 FAM162BQ5T6X4 162 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 ASCL5Q7RTU5 278 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 MRPL30Q8TCC3 161 aaKnown RBP13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 GALNT14Q96FL9 552 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 REPIN1Q9BWE0 567 aaKnown RBP13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 RNF24Q9Y225 148 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 PPIAL4AQ9Y536 164 aa13.12□□□□□ -0.31
PCDHA3-202ENST00000532566 IGKV1-9A0A0C4DH69 117 aa13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 ODAMA1E959 279 aa13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 CTSSP25774 331 aa13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 FAM74A3Q4VXF1 159 aa13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 ABLIM2Q6H8Q1 611 aa13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 VOPP1Q96AW1 172 aa13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 ZNF319Q9P2F9 582 aa13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 ZNF318Q5VUA4 2279 aa13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 J3QR06 171 aa13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 NTN3O00634 580 aaPredicted RBP13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 SLC25A5P05141 298 aaKnown RBP13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 BCL2P10415 239 aa13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 TEPPQ6URK8 271 aa13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 OR4P4Q8NGL7 312 aa13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 RHOVQ96L33 236 aa13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 SLC25A10Q9UBX3 287 aaPredicted RBP13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 DBX1A6NMT0 343 aa13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 H0Y8G0 127 aa13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 ARL16Q0P5N6 197 aa13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 CCL13Q99616 98 aa13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 TLNRD1Q9H1K6 362 aa13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 ESPL1Q14674 2120 aa13.11□□□□□ -0.31
PCDHA3-202ENST00000532566 FAM90A26D6RGX4 464 aa13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 PAX5Q02548 391 aa13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 GCSAMQ8N6F7 178 aa13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 OR1L8Q8NGR8 309 aa13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 TP53RKQ96S44 253 aa13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 FAM103A1Q9BTL3 118 aaKnown RBP13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 RSRP1Q9BUV0 290 aa13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 NAT8BQ9UHF3 227 aa13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 CD1BP29016 333 aa13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 CYB561D1Q8N8Q1 229 aa13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 MSGN1A6NI15 193 aa13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 HSBP1O75506 76 aa13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 ORM2P19652 201 aa13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 PTGDSP41222 190 aa13.1□□□□□ -0.31
PCDHA3-202ENST00000532566 ERVS71-1P61550 626 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms