RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	ZNF833P	Q6ZTB9	187 aa		13.82	□□□□□ -0.2
CTSB-223	ENST00000532370	ABHD14B	Q96IU4	210 aa		13.82	□□□□□ -0.2
CTSB-223	ENST00000532370	RITA1	Q96K30	269 aa		13.82	□□□□□ -0.2
CTSB-223	ENST00000532370	ZNF251	Q9BRH9	671 aa		13.82	□□□□□ -0.2
CTSB-223	ENST00000532370	AGMAT	Q9BSE5	352 aa		13.82	□□□□□ -0.2
CTSB-223	ENST00000532370	RNF150	Q9ULK6	438 aa		13.82	□□□□□ -0.2
CTSB-223	ENST00000532370	IGKV1D-8	A0A087WSZ0	117 aa		13.81	□□□□□ -0.2
CTSB-223	ENST00000532370	LINC01548	A6NM66	108 aa		13.81	□□□□□ -0.2
CTSB-223	ENST00000532370	FBXO24	O75426	580 aa		13.81	□□□□□ -0.2
CTSB-223	ENST00000532370	RPS19	P39019	145 aa	Known RBP	13.81	□□□□□ -0.2
CTSB-223	ENST00000532370	ARFRP1	Q13795	201 aa		13.81	□□□□□ -0.2
CTSB-223	ENST00000532370	FAM110D	Q8TAY7	271 aa	Predicted RBP	13.81	□□□□□ -0.2
CTSB-223	ENST00000532370	SLC25A38	Q96DW6	304 aa		13.81	□□□□□ -0.2
CTSB-223	ENST00000532370	CITED2	Q99967	270 aa	Predicted RBP	13.81	□□□□□ -0.2
CTSB-223	ENST00000532370	NABP2	Q9BQ15	211 aa		13.81	□□□□□ -0.2
CTSB-223	ENST00000532370	RHBDL2	Q9NX52	303 aa		13.81	□□□□□ -0.2
CTSB-223	ENST00000532370	TMEM235	A6NFC5	223 aa		13.8	□□□□□ -0.2
CTSB-223	ENST00000532370	BET1	O15155	118 aa		13.8	□□□□□ -0.2
CTSB-223	ENST00000532370	FGF16	O43320	207 aa		13.8	□□□□□ -0.2
CTSB-223	ENST00000532370	TALDO1	P37837	337 aa		13.8	□□□□□ -0.2
CTSB-223	ENST00000532370	ALDH3B2	P48448	385 aa		13.8	□□□□□ -0.2
CTSB-223	ENST00000532370	CENPV	Q7Z7K6	275 aa	Predicted RBP	13.8	□□□□□ -0.2
CTSB-223	ENST00000532370		Q8N9W7	124 aa		13.8	□□□□□ -0.2
CTSB-223	ENST00000532370	OR5AU1	Q8NGC0	362 aa		13.8	□□□□□ -0.2
CTSB-223	ENST00000532370	OR4A4P	Q8NGN8	299 aa		13.8	□□□□□ -0.2
CTSB-223	ENST00000532370	OR13F1	Q8NGS4	319 aa		13.8	□□□□□ -0.2
CTSB-223	ENST00000532370	NOL4L	Q96MY1	436 aa	Predicted RBP	13.8	□□□□□ -0.2
CTSB-223	ENST00000532370	FUNDC2	Q9BWH2	189 aa		13.8	□□□□□ -0.2
CTSB-223	ENST00000532370	RDH8	Q9NYR8	311 aa		13.8	□□□□□ -0.2
CTSB-223	ENST00000532370	LINC00527	Q9UJ94	153 aa		13.8	□□□□□ -0.2
CTSB-223	ENST00000532370	ITGB1BP1	O14713	200 aa		13.79	□□□□□ -0.2
CTSB-223	ENST00000532370	RAB29	O14966	203 aa		13.79	□□□□□ -0.2
CTSB-223	ENST00000532370	PROP1	O75360	226 aa		13.79	□□□□□ -0.2
CTSB-223	ENST00000532370	TFAP2A	P05549	437 aa		13.79	□□□□□ -0.2
CTSB-223	ENST00000532370	CSF1	P09603	554 aa		13.79	□□□□□ -0.2
CTSB-223	ENST00000532370	CT45A6	P0DMU7	189 aa		13.79	□□□□□ -0.2
CTSB-223	ENST00000532370	CT45A5	P0DMU8	189 aa		13.79	□□□□□ -0.2
CTSB-223	ENST00000532370	CT45A7	P0DMV0	189 aa		13.79	□□□□□ -0.2
CTSB-223	ENST00000532370	NCS1	P62166	190 aa		13.79	□□□□□ -0.2
CTSB-223	ENST00000532370	C2orf68	Q2NKX9	166 aa		13.79	□□□□□ -0.2
CTSB-223	ENST00000532370	NSUN5P1	Q3KNT7	163 aa		13.79	□□□□□ -0.2
CTSB-223	ENST00000532370	ZNF260	Q3ZCT1	412 aa		13.79	□□□□□ -0.2
CTSB-223	ENST00000532370	TCTEX1D4	Q5JR98	221 aa		13.79	□□□□□ -0.2
CTSB-223	ENST00000532370	HACD4	Q5VWC8	232 aa		13.79	□□□□□ -0.2
CTSB-223	ENST00000532370	GLDN	Q6ZMI3	551 aa	Predicted RBP	13.79	□□□□□ -0.2
CTSB-223	ENST00000532370	NUDCD2	Q8WVJ2	157 aa		13.79	□□□□□ -0.2
CTSB-223	ENST00000532370	S1PR3	Q99500	378 aa		13.79	□□□□□ -0.2
CTSB-223	ENST00000532370	ST6GALNAC5	Q9BVH7	336 aa		13.79	□□□□□ -0.2
CTSB-223	ENST00000532370	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
CTSB-223	ENST00000532370	PIPOX	Q9P0Z9	390 aa		13.79	□□□□□ -0.2
CTSB-223	ENST00000532370	ADARB2-AS1	A8MUL3	147 aa		13.78	□□□□□ -0.2
CTSB-223	ENST00000532370	CNTFR	P26992	372 aa		13.78	□□□□□ -0.2
CTSB-223	ENST00000532370	LINC00205	P59089	165 aa		13.78	□□□□□ -0.2
CTSB-223	ENST00000532370	KIR2DS1	Q14954	304 aa		13.78	□□□□□ -0.2
CTSB-223	ENST00000532370	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.78	□□□□□ -0.2
CTSB-223	ENST00000532370	CABLES2	Q9BTV7	478 aa		13.78	□□□□□ -0.2
CTSB-223	ENST00000532370	MMP27	Q9H306	513 aa		13.78	□□□□□ -0.2
CTSB-223	ENST00000532370	ETV7	Q9Y603	341 aa		13.78	□□□□□ -0.2
CTSB-223	ENST00000532370	TRAV18	A0A075B6X5	111 aa		13.77	□□□□□ -0.21
CTSB-223	ENST00000532370	TRBV6-7	A0A0A0MS04	114 aa		13.77	□□□□□ -0.21
CTSB-223	ENST00000532370	SSX5	O60225	188 aa		13.77	□□□□□ -0.21
CTSB-223	ENST00000532370	GSTP1	P09211	210 aa	Known RBP	13.77	□□□□□ -0.21
CTSB-223	ENST00000532370	SCAND1	P57086	179 aa		13.77	□□□□□ -0.21
CTSB-223	ENST00000532370	VBP1	P61758	197 aa		13.77	□□□□□ -0.21
CTSB-223	ENST00000532370	ARL6IP1	Q15041	203 aa		13.77	□□□□□ -0.21
CTSB-223	ENST00000532370	MEGF8	Q7Z7M0	2845 aa		13.77	□□□□□ -0.21
CTSB-223	ENST00000532370	ZNF329	Q86UD4	541 aa		13.77	□□□□□ -0.21
CTSB-223	ENST00000532370	FAM71E2	Q8N5Q1	922 aa		13.77	□□□□□ -0.21
CTSB-223	ENST00000532370	OR10J5	Q8NHC4	309 aa		13.77	□□□□□ -0.21
CTSB-223	ENST00000532370	EDARADD	Q8WWZ3	215 aa		13.77	□□□□□ -0.21
CTSB-223	ENST00000532370	NAA50	Q9GZZ1	169 aa	Known RBP	13.77	□□□□□ -0.21
CTSB-223	ENST00000532370	ABCG5	Q9H222	651 aa		13.77	□□□□□ -0.21
CTSB-223	ENST00000532370	SPATA2	Q9UM82	520 aa		13.77	□□□□□ -0.21
CTSB-223	ENST00000532370		A0A1W2PRX2	142 aa		13.76	□□□□□ -0.21
CTSB-223	ENST00000532370	SCGN	O76038	276 aa		13.76	□□□□□ -0.21
CTSB-223	ENST00000532370	IGHG2	P01859	326 aa		13.76	□□□□□ -0.21
CTSB-223	ENST00000532370	OR8U9	P0C7N5	309 aa		13.76	□□□□□ -0.21
CTSB-223	ENST00000532370	DTYMK	P23919	212 aa		13.76	□□□□□ -0.21
CTSB-223	ENST00000532370	GPR12	P47775	334 aa		13.76	□□□□□ -0.21
CTSB-223	ENST00000532370	SERPINB10	P48595	397 aa		13.76	□□□□□ -0.21
CTSB-223	ENST00000532370	ACTB	P60709	375 aa		13.76	□□□□□ -0.21
CTSB-223	ENST00000532370	CD83	Q01151	205 aa		13.76	□□□□□ -0.21
CTSB-223	ENST00000532370	MMD	Q15546	238 aa		13.76	□□□□□ -0.21
CTSB-223	ENST00000532370	SRSF7	Q16629	238 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
CTSB-223	ENST00000532370	FAM71F2	Q6NXP2	309 aa		13.76	□□□□□ -0.21
CTSB-223	ENST00000532370	FAM131A	Q6UXB0	335 aa		13.76	□□□□□ -0.21
CTSB-223	ENST00000532370		Q6ZS49	121 aa		13.76	□□□□□ -0.21
CTSB-223	ENST00000532370	SLC35E3	Q7Z769	313 aa		13.76	□□□□□ -0.21
CTSB-223	ENST00000532370	OR8H1	Q8NGG4	311 aa		13.76	□□□□□ -0.21
CTSB-223	ENST00000532370	OR8U1	Q8NH10	309 aa		13.76	□□□□□ -0.21
CTSB-223	ENST00000532370	RASL11B	Q9BPW5	248 aa		13.76	□□□□□ -0.21
CTSB-223	ENST00000532370	HSPB9	Q9BQS6	159 aa		13.76	□□□□□ -0.21
CTSB-223	ENST00000532370	TOLLIP	Q9H0E2	274 aa		13.76	□□□□□ -0.21
CTSB-223	ENST00000532370	LIN7C	Q9NUP9	197 aa	Known RBP	13.76	□□□□□ -0.21
CTSB-223	ENST00000532370		H0YJW9	148 aa		13.75	□□□□□ -0.21
CTSB-223	ENST00000532370	PTHLH	P12272	177 aa		13.75	□□□□□ -0.21
CTSB-223	ENST00000532370	RPL5	P46777	297 aa	Known RBP	13.75	□□□□□ -0.21
CTSB-223	ENST00000532370	GNG2	P59768	71 aa		13.75	□□□□□ -0.21
CTSB-223	ENST00000532370	NDUFA11	Q86Y39	141 aa		13.75	□□□□□ -0.21
CTSB-223	ENST00000532370	SLC25A46	Q96AG3	418 aa		13.75	□□□□□ -0.21

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