RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 CD36P16671 472 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 ZNF32P17041 273 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 DDTP30046 118 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 CCR7P32248 378 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 TCL1AP56279 114 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 NAA20P61599 178 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 HLA-DRB3P79483 266 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 FABP5Q01469 135 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 DR1Q01658 176 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 APOFQ13790 326 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 TMED2Q15363 201 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 RSU1Q15404 277 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 ZFAND6Q6FIF0 208 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 OR10K2Q6IF99 312 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 SPOPLQ6IQ16 392 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 ADM2Q7Z4H4 148 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 HMGN2P46Q86SG4 172 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 GID4Q8IVV7 300 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 ZNF615Q8N8J6 731 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 OR11G2Q8NGC1 345 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 MFSD8Q8NHS3 518 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 JOSD2Q8TAC2 188 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 Q8WTZ3 238 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 ASB17Q8WXJ9 295 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 OR51I1Q9H343 314 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 HES4Q9HCC6 221 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 RPUSD1Q9UJJ7 312 aaKnown RBP2.52□□□□□ -2.01
USP47-211ENST00000531513 DNAJC12Q9UKB3 198 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 PCM1Q15154 2024 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 CEP170Q5SW79 1584 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
USP47-211ENST00000531513 A6NED7 52 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 VGLL3A8MV65 326 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 C4orf51C9J302 202 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 H3BMM0 161 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 MRASO14807 208 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 DEDDO75618 318 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 IGLV3-27P01718 113 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 REG1AP05451 166 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 CDK2P24941 298 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 PMELP40967 661 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 OR1E2P47887 323 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 LINC00313P59037 77 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 LSM6P62312 80 aaKnown RBP2.51□□□□□ -2.01
USP47-211ENST00000531513 ARF6P62330 175 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 HERVK_113P63121 156 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 OR2F1Q13607 317 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 PDGFRLQ15198 375 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 HIST3H3Q16695 136 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 LRRC75BQ2VPJ9 315 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 SPINT4Q6UDR6 99 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 NIT1Q86X76 327 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 TRAPPC5Q8IUR0 188 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 H1FOOQ8IZA3 346 aaPredicted RBP2.51□□□□□ -2.01
USP47-211ENST00000531513 ZNF567Q8N184 647 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 UBE2WQ96B02 151 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 ABHD14BQ96IU4 210 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 MRPS16Q9Y3D3 137 aaKnown RBP2.51□□□□□ -2.01
USP47-211ENST00000531513 ZNF337Q9Y3M9 751 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 LINC00588Q9Y4M8 146 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 OR51B4Q9Y5P0 310 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 PLCH2O75038 1416 aa2.51□□□□□ -2.01
USP47-211ENST00000531513 EVPLLA8MZ36 301 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 DENRO43583 198 aaKnown RBP2.5□□□□□ -2.01
USP47-211ENST00000531513 STK16O75716 305 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 TCRBP04435 133 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 CTLA4P16410 223 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 CRABP2P29373 138 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 REG1BP48304 166 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 SNAP25P60880 206 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 B2MP61769 119 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 CCL7P80098 99 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 DEFA6Q01524 100 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 BSPH1Q075Z2 132 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 AESQ08117 197 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 BIKQ13323 160 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 DNLZQ5SXM8 178 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 Q6ZQT7 251 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 RNF182Q8N6D2 247 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 BPIFB6Q8NFQ5 453 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 TMA16Q96EY4 203 aaKnown RBP2.5□□□□□ -2.01
USP47-211ENST00000531513 ANKRD36BP1Q96IX9 119 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 OR51I2Q9H344 312 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 PRELID1Q9Y255 219 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 FIS1Q9Y3D6 152 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 PCYT1BQ9Y5K3 369 aaPredicted RBP2.5□□□□□ -2.01
USP47-211ENST00000531513 TRIP11Q15643 1979 aa2.5□□□□□ -2.01
USP47-211ENST00000531513 KIF15Q9NS87 1388 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 YLPM1P49750 1951 aaKnown RBP2.49□□□□□ -2.01
USP47-211ENST00000531513 TRBV24-1A0A075B6N3 115 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 A0A0B4J2C4 111 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 LINC00862A6NCI5 91 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 SH2D1AO60880 128 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 TNNC2P02585 160 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 UCHL3P15374 230 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 HSD11B1P28845 292 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 OPRM1P35372 400 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 OMPP47874 163 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 RAB5BP61020 215 aa2.49□□□□□ -2.01
USP47-211ENST00000531513 EMX1Q04741 257 aaPredicted RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms