RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 ZNF581Q9P0T4 197 aa5.1□□□□□ -1.59
CSDE1-213ENST00000530784 ENPP5Q9UJA9 477 aa5.1□□□□□ -1.59
CSDE1-213ENST00000530784 PITPNC1Q9UKF7 332 aa5.1□□□□□ -1.59
CSDE1-213ENST00000530784 PIGLQ9Y2B2 252 aa5.1□□□□□ -1.59
CSDE1-213ENST00000530784 POLDIP2Q9Y2S7 368 aa5.1□□□□□ -1.59
CSDE1-213ENST00000530784 TBL2Q9Y4P3 447 aaKnown RBP5.1□□□□□ -1.59
CSDE1-213ENST00000530784 ETV7Q9Y603 341 aa5.1□□□□□ -1.59
CSDE1-213ENST00000530784 A6NDX4 124 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 C17orf98A8MV24 154 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 ODF3BA8MYP8 253 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 KLLNB2CW77 178 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 GNGT2O14610 69 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 SYT7O43581 403 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 SYNGR1O43759 233 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 NOS1APO75052 506 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-213ENST00000530784 ZNF254O75437 659 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 DHRS3O75911 302 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 DCTN3O75935 186 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 CST1P01037 141 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 NRASP01111 189 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 IGLV3-1P01715 115 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 ARG1P05089 322 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 MRPL3P09001 348 aaKnown RBP5.09□□□□□ -1.59
CSDE1-213ENST00000530784 PIPP12273 146 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-213ENST00000530784 ALOX5APP20292 161 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 HAAOP46952 286 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 RAB13P51153 203 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 KRTAP12-2P59991 146 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 DYNC1I2Q13409 638 aaKnown RBP5.09□□□□□ -1.59
CSDE1-213ENST00000530784 SSX2Q16385 188 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 DEGS2Q6QHC5 323 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 CCBE1Q6UXH8 406 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-213ENST00000530784 SIGLEC15Q6ZMC9 328 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 TMUB2Q71RG4 321 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 CALHM1Q8IU99 346 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 DYNAPQ8N1N2 210 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 ASCC1Q8N9N2 400 aaKnown RBP5.09□□□□□ -1.59
CSDE1-213ENST00000530784 BBS1Q8NFJ9 593 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 OR13D1Q8NGV5 346 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 OR51E1Q8TCB6 317 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 MALSU1Q96EH3 234 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 OR5M11Q96RB7 305 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 TEAD3Q99594 435 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 NRIP2Q9BQI9 281 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 TTTY10Q9BZA0 68 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 YIPF3Q9GZM5 350 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 NUFIP1Q9UHK0 495 aaKnown RBP5.09□□□□□ -1.59
CSDE1-213ENST00000530784 IKZF2Q9UKS7 526 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 ARL2BPQ9Y2Y0 163 aa5.09□□□□□ -1.59
CSDE1-213ENST00000530784 PQLC2LA1A4F0 135 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 LOC110117498-PIK3R3F6TDL0 507 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 DLGAP1O14490 977 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 E2F6O75461 281 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 RBP4P02753 201 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 TTRP02766 147 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 ZNF728P0DKX0 622 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 SLC2A5P22732 501 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 VDAC2P45880 294 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-213ENST00000530784 HCCSP53701 268 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 EDDM3BP56851 147 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 OR12D2P58182 307 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 ESRRGP62508 458 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 MFGE8Q08431 387 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-213ENST00000530784 APOFQ13790 326 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 CLVS2Q5SYC1 327 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 BCL2L15Q5TBC7 163 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 ASRGL1Q7L266 308 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 GDPD3Q7L5L3 318 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 ZNF679Q8IYX0 411 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 BATF2Q8N1L9 274 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 OR11H6Q8NGC7 330 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 PCNPQ8WW12 178 aaKnown RBP5.08□□□□□ -1.6
CSDE1-213ENST00000530784 ASB17Q8WXJ9 295 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 GGHQ92820 318 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 CCDC124Q96CT7 223 aaKnown RBP5.08□□□□□ -1.6
CSDE1-213ENST00000530784 ASB9Q96DX5 294 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 OR8B4Q96RC9 309 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 CNN2Q99439 309 aaKnown RBP5.08□□□□□ -1.6
CSDE1-213ENST00000530784 CHID1Q9BWS9 393 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 PLEKHA3Q9HB20 300 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 HES4Q9HCC6 221 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 SLC22A13Q9Y226 551 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 TMEM14AQ9Y6G1 99 aa5.08□□□□□ -1.6
CSDE1-213ENST00000530784 hADV38S2A0JD32 116 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 K7N7A8 449 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 ZNF737O75373 536 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 IGHV1-8P0DP01 117 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 IGLL1P15814 213 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 DYNLT3P51808 116 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 DLX6P56179 175 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 ACTA2P62736 377 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 BLCAPP62952 87 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 ACTG2P63267 376 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 ACTC1P68032 377 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 ACTA1P68133 377 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 SLC35A2P78381 396 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 CDK5Q00535 292 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 IL24Q13007 206 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 IL18R1Q13478 541 aa5.07□□□□□ -1.6
CSDE1-213ENST00000530784 EDDM3AQ14507 147 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms