RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 GP1BBP13224 206 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 ZNF90Q03938 601 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 PIGYQ3MUY2 71 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 DOK3Q7L591 496 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 COL4A2P08572 1712 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 SLC17A3O00476 420 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 RAB29O14966 203 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 ZNF83P51522 516 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 NHLH1Q02575 133 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 FUT7Q11130 342 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 MRPL43Q8N983 215 aaKnown RBP12.06□□□□□ -0.48
PCF11-204ENST00000530660 NEUROG1Q92886 237 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 GNB1P62873 340 aa12.05□□□□□ -0.48
PCF11-204ENST00000530660 RAET1LQ5VY80 246 aa12.05□□□□□ -0.48
PCF11-204ENST00000530660 BATF2Q8N1L9 274 aa12.05□□□□□ -0.48
PCF11-204ENST00000530660 MUC15Q8N387 334 aa12.05□□□□□ -0.48
PCF11-204ENST00000530660 TMEM234Q8WY98 164 aa12.05□□□□□ -0.48
PCF11-204ENST00000530660 WDR61Q9GZS3 305 aaKnown RBP12.05□□□□□ -0.48
PCF11-204ENST00000530660 TMEM131Q92545 1883 aa12.05□□□□□ -0.48
PCF11-204ENST00000530660 A0A1W2PS18 150 aa12.05□□□□□ -0.48
PCF11-204ENST00000530660 SNURFLB1AK76 121 aa12.05□□□□□ -0.48
PCF11-204ENST00000530660 SPINK4O60575 86 aa12.05□□□□□ -0.48
PCF11-204ENST00000530660 NTF3P20783 257 aa12.05□□□□□ -0.48
PCF11-204ENST00000530660 KITLGP21583 273 aa12.05□□□□□ -0.48
PCF11-204ENST00000530660 HNRNPA2B1P22626 353 aaKnown RBP12.05□□□□□ -0.48
PCF11-204ENST00000530660 ARG2P78540 354 aa12.05□□□□□ -0.48
PCF11-204ENST00000530660 LRRC10Q5BKY1 277 aa12.05□□□□□ -0.48
PCF11-204ENST00000530660 ZDHHC23Q8IYP9 409 aa12.05□□□□□ -0.48
PCF11-204ENST00000530660 ABHD14BQ96IU4 210 aa12.05□□□□□ -0.48
PCF11-204ENST00000530660 UNC13CQ8NB66 2214 aa12.05□□□□□ -0.48
PCF11-204ENST00000530660 LINC00271P0C7V0 271 aa12.04□□□□□ -0.48
PCF11-204ENST00000530660 PRRX1P54821 245 aa12.04□□□□□ -0.48
PCF11-204ENST00000530660 MRPL27Q9P0M9 148 aaKnown RBP12.04□□□□□ -0.48
PCF11-204ENST00000530660 CDC42EP3Q9UKI2 254 aa12.04□□□□□ -0.48
PCF11-204ENST00000530660 WASHC3Q9Y3C0 194 aa12.04□□□□□ -0.48
PCF11-204ENST00000530660 TRBV20OR9-2A0A075B6H5 130 aa12.04□□□□□ -0.48
PCF11-204ENST00000530660 A0A0J9YY10 115 aa12.04□□□□□ -0.48
PCF11-204ENST00000530660 Q0VG73 95 aa12.04□□□□□ -0.48
PCF11-204ENST00000530660 Q6ZRM9 215 aa12.04□□□□□ -0.48
PCF11-204ENST00000530660 TAF15Q92804 592 aaKnown RBP eCLIP12.04□□□□□ -0.48
PCF11-204ENST00000530660 CLEC1BQ9P126 229 aa12.04□□□□□ -0.48
PCF11-204ENST00000530660 IGKV1D-13A0A0B4J2D9 117 aa12.04□□□□□ -0.48
PCF11-204ENST00000530660 GNG7O60262 68 aa12.04□□□□□ -0.48
PCF11-204ENST00000530660 IGKV1-13P0DP09 117 aa12.04□□□□□ -0.48
PCF11-204ENST00000530660 IGLL1P15814 213 aa12.04□□□□□ -0.48
PCF11-204ENST00000530660 ATP5G3P48201 142 aa12.04□□□□□ -0.48
PCF11-204ENST00000530660 HLA-DRB5Q30154 266 aa12.04□□□□□ -0.48
PCF11-204ENST00000530660 MDFIC2A0A1B0GVS7 189 aa12.03□□□□□ -0.48
PCF11-204ENST00000530660 TRAF3IP2O43734 574 aaPredicted RBP12.03□□□□□ -0.48
PCF11-204ENST00000530660 RPS20P60866 119 aaKnown RBP12.03□□□□□ -0.48
PCF11-204ENST00000530660 PSG9Q00887 426 aa12.03□□□□□ -0.48
PCF11-204ENST00000530660 ACSF3Q4G176 576 aaPredicted RBP12.03□□□□□ -0.48
PCF11-204ENST00000530660 GMPPAQ96IJ6 420 aaPredicted RBP12.03□□□□□ -0.48
PCF11-204ENST00000530660 TMEM204Q9BSN7 226 aa12.03□□□□□ -0.48
PCF11-204ENST00000530660 PSENENQ9NZ42 101 aa12.03□□□□□ -0.48
PCF11-204ENST00000530660 PIGLQ9Y2B2 252 aa12.03□□□□□ -0.48
PCF11-204ENST00000530660 NDUFS8O00217 210 aa12.03□□□□□ -0.48
PCF11-204ENST00000530660 ADH1BP00325 375 aa12.03□□□□□ -0.48
PCF11-204ENST00000530660 FUT6P51993 359 aa12.03□□□□□ -0.48
PCF11-204ENST00000530660 VWA1Q6PCB0 445 aa12.03□□□□□ -0.48
PCF11-204ENST00000530660 CLEC7AQ9BXN2 247 aa12.03□□□□□ -0.48
PCF11-204ENST00000530660 MOB1AQ9H8S9 216 aa12.03□□□□□ -0.48
PCF11-204ENST00000530660 F5H5K5 113 aa12.03□□□□□ -0.48
PCF11-204ENST00000530660 ARF1P84077 181 aaKnown RBP12.03□□□□□ -0.48
PCF11-204ENST00000530660 SPANXN5Q5MJ07 72 aa12.03□□□□□ -0.48
PCF11-204ENST00000530660 CARD17Q5XLA6 110 aa12.03□□□□□ -0.48
PCF11-204ENST00000530660 STUMQ69YW2 141 aa12.03□□□□□ -0.48
PCF11-204ENST00000530660 PNKDQ8N490 385 aa12.03□□□□□ -0.48
PCF11-204ENST00000530660 RLN3Q8WXF3 142 aa12.03□□□□□ -0.48
PCF11-204ENST00000530660 PNO1Q9NRX1 252 aaKnown RBP12.03□□□□□ -0.48
PCF11-204ENST00000530660 MUC21A0A0G2JKD1 596 aa12.02□□□□□ -0.49
PCF11-204ENST00000530660 MUC21A0A140T8X8 626 aa12.02□□□□□ -0.49
PCF11-204ENST00000530660 NUDT3O95989 172 aa12.02□□□□□ -0.49
PCF11-204ENST00000530660 CA2P00918 260 aa12.02□□□□□ -0.49
PCF11-204ENST00000530660 CELA3BP08861 270 aa12.02□□□□□ -0.49
PCF11-204ENST00000530660 CCL1P22362 96 aa12.02□□□□□ -0.49
PCF11-204ENST00000530660 LGALS7P47929 136 aa12.02□□□□□ -0.49
PCF11-204ENST00000530660 CCR5P51681 352 aa12.02□□□□□ -0.49
PCF11-204ENST00000530660 IGLV3-21P80748 117 aaPredicted RBP12.02□□□□□ -0.49
PCF11-204ENST00000530660 MUC21Q5SSG8 566 aa12.02□□□□□ -0.49
PCF11-204ENST00000530660 OR10G9Q8NGN4 311 aa12.02□□□□□ -0.49
PCF11-204ENST00000530660 OR10G7Q8NGN6 311 aa12.02□□□□□ -0.49
PCF11-204ENST00000530660 OR5B3Q8NH48 314 aa12.02□□□□□ -0.49
PCF11-204ENST00000530660 ZNF721Q8TF20 911 aa12.02□□□□□ -0.49
PCF11-204ENST00000530660 FGF14Q92915 247 aa12.02□□□□□ -0.49
PCF11-204ENST00000530660 SOHLH2Q9NX45 425 aa12.02□□□□□ -0.49
PCF11-204ENST00000530660 WNT16Q9UBV4 365 aa12.02□□□□□ -0.49
PCF11-204ENST00000530660 TRAV8-6A0A0B4J262 113 aa12.02□□□□□ -0.49
PCF11-204ENST00000530660 TOX4O94842 621 aa12.02□□□□□ -0.49
PCF11-204ENST00000530660 CCL28Q9NRJ3 127 aa12.02□□□□□ -0.49
PCF11-204ENST00000530660 PTRH2Q9Y3E5 179 aaKnown RBP12.02□□□□□ -0.49
PCF11-204ENST00000530660 CTXND1A0A1B0GTU2 59 aa12.01□□□□□ -0.49
PCF11-204ENST00000530660 LOC102725191A0A1B0GVB3 256 aa12.01□□□□□ -0.49
PCF11-204ENST00000530660 UCP1P25874 307 aa12.01□□□□□ -0.49
PCF11-204ENST00000530660 OTX2P32243 289 aa12.01□□□□□ -0.49
PCF11-204ENST00000530660 DAP3P51398 398 aaKnown RBP12.01□□□□□ -0.49
PCF11-204ENST00000530660 Q56UQ5 140 aa12.01□□□□□ -0.49
PCF11-204ENST00000530660 OR1N2Q8NGR9 330 aa12.01□□□□□ -0.49
PCF11-204ENST00000530660 KCNS1Q96KK3 526 aa12.01□□□□□ -0.49
PCF11-204ENST00000530660 C2orf72A6NCS6 295 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms