RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 AHSA2Q719I0 299 aa16.03■□□□□ 0.16
TSPAN4-219ENST00000530404 DHRSXQ8N5I4 330 aa16.03■□□□□ 0.16
TSPAN4-219ENST00000530404 SETD6Q8TBK2 473 aa16.03■□□□□ 0.16
TSPAN4-219ENST00000530404 ABHD5Q8WTS1 349 aa16.03■□□□□ 0.16
TSPAN4-219ENST00000530404 NEDD4LQ96PU5 975 aa16.03■□□□□ 0.16
TSPAN4-219ENST00000530404 NICN1Q9BSH3 213 aa16.03■□□□□ 0.16
TSPAN4-219ENST00000530404 FAM103A1Q9BTL3 118 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-219ENST00000530404 TOLLIPQ9H0E2 274 aa16.03■□□□□ 0.16
TSPAN4-219ENST00000530404 CST11Q9H112 138 aa16.03■□□□□ 0.16
TSPAN4-219ENST00000530404 GAB2Q9UQC2 676 aa16.03■□□□□ 0.16
TSPAN4-219ENST00000530404 IGHV3-11P01762 117 aa16.02■□□□□ 0.16
TSPAN4-219ENST00000530404 GNAO1P09471 354 aa16.02■□□□□ 0.16
TSPAN4-219ENST00000530404 WNT4P56705 351 aa16.02■□□□□ 0.16
TSPAN4-219ENST00000530404 PLGLAQ15195 96 aa16.02■□□□□ 0.16
TSPAN4-219ENST00000530404 LY6G6FQ5SQ64 297 aa16.02■□□□□ 0.16
TSPAN4-219ENST00000530404 ARPC1AQ92747 370 aa16.02■□□□□ 0.16
TSPAN4-219ENST00000530404 ABHD14BQ96IU4 210 aa16.02■□□□□ 0.16
TSPAN4-219ENST00000530404 CLCC1Q96S66 551 aa16.02■□□□□ 0.16
TSPAN4-219ENST00000530404 FOXA2Q9Y261 457 aaPredicted RBP16.02■□□□□ 0.16
TSPAN4-219ENST00000530404 TRIM64CA6NLI5 447 aa16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 RRHO14718 337 aa16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 LGALS1P09382 135 aaKnown RBP16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 FRMD6-AS1P0C7T7 363 aa16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 CT45A6P0DMU7 189 aa16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 CT45A5P0DMU8 189 aa16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 CT45A7P0DMV0 189 aa16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 EGR2P11161 476 aaPredicted RBP16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 GP9P14770 177 aa16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 HTR2CP28335 458 aa16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 CX3CL1P78423 397 aa16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 HAPLN4Q86UW8 402 aa16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 SVOPQ8N4V2 548 aa16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 MUC7Q8TAX7 377 aa16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 MS4A10Q96PG2 267 aa16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 CHMP1AQ9HD42 196 aaPredicted RBP16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 TPSG1Q9NRR2 321 aa16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 ABRACLQ9P1F3 81 aa16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 GHRLQ9UBU3 117 aa16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 STEAP1Q9UHE8 339 aa16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 PSORS1C1Q9UIG5 152 aa16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 ERGIC3Q9Y282 383 aa16.01■□□□□ 0.15
TSPAN4-219ENST00000530404 CD1AP06126 327 aa16■□□□□ 0.15
TSPAN4-219ENST00000530404 MAPK3P27361 379 aaPredicted RBP16■□□□□ 0.15
TSPAN4-219ENST00000530404 CRIP2P52943 208 aaPredicted RBP16■□□□□ 0.15
TSPAN4-219ENST00000530404 RPS27AP62979 156 aaKnown RBP16■□□□□ 0.15
TSPAN4-219ENST00000530404 UNC119Q13432 240 aa16■□□□□ 0.15
TSPAN4-219ENST00000530404 RBM48Q5RL73 367 aaKnown RBP16■□□□□ 0.15
TSPAN4-219ENST00000530404 CASC10Q5T4H9 136 aa16■□□□□ 0.15
TSPAN4-219ENST00000530404 ZNF660Q6AZW8 331 aaPredicted RBP16■□□□□ 0.15
TSPAN4-219ENST00000530404 LRRTM1Q86UE6 522 aa16■□□□□ 0.15
TSPAN4-219ENST00000530404 TMEM59Q9BXS4 323 aa16■□□□□ 0.15
TSPAN4-219ENST00000530404 GAR1Q9NY12 217 aaKnown RBP16■□□□□ 0.15
TSPAN4-219ENST00000530404 CNOT2Q9NZN8 540 aaKnown RBP16■□□□□ 0.15
TSPAN4-219ENST00000530404 PIPOXQ9P0Z9 390 aa16■□□□□ 0.15
TSPAN4-219ENST00000530404 NUBP2Q9Y5Y2 271 aa16■□□□□ 0.15
TSPAN4-219ENST00000530404 A0A0A6YYD4 124 aa15.99■□□□□ 0.15
TSPAN4-219ENST00000530404 H0YJW9 148 aa15.99■□□□□ 0.15
TSPAN4-219ENST00000530404 H7C2Y5 167 aa15.99■□□□□ 0.15
TSPAN4-219ENST00000530404 RAB29O14966 203 aa15.99■□□□□ 0.15
TSPAN4-219ENST00000530404 GSTP1P09211 210 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-219ENST00000530404 SRSF7Q16629 238 aaKnown RBP eCLIP15.99■□□□□ 0.15
TSPAN4-219ENST00000530404 ACSM3Q53FZ2 586 aa15.99■□□□□ 0.15
TSPAN4-219ENST00000530404 FAM71F2Q6NXP2 309 aa15.99■□□□□ 0.15
TSPAN4-219ENST00000530404 ACSM6Q6P461 480 aa15.99■□□□□ 0.15
TSPAN4-219ENST00000530404 UNQ5815/PRO19632Q6UWF5 114 aa15.99■□□□□ 0.15
TSPAN4-219ENST00000530404 NANOGP1Q8N7R0 232 aa15.99■□□□□ 0.15
TSPAN4-219ENST00000530404 BPIFB6Q8NFQ5 453 aa15.99■□□□□ 0.15
TSPAN4-219ENST00000530404 HDHD3Q9BSH5 251 aaPredicted RBP15.99■□□□□ 0.15
TSPAN4-219ENST00000530404 SLC23A1Q9UHI7 598 aa15.99■□□□□ 0.15
TSPAN4-219ENST00000530404 LRRC42Q9Y546 428 aa15.99■□□□□ 0.15
TSPAN4-219ENST00000530404 TNCP24821 2201 aa15.99■□□□□ 0.15
TSPAN4-219ENST00000530404 NAPSAO96009 420 aa15.98■□□□□ 0.15
TSPAN4-219ENST00000530404 UBBP0CG47 229 aa15.98■□□□□ 0.15
TSPAN4-219ENST00000530404 ZNF880Q6PDB4 577 aa15.98■□□□□ 0.15
TSPAN4-219ENST00000530404 PPP1R27Q86WC6 154 aa15.98■□□□□ 0.15
TSPAN4-219ENST00000530404 C8orf59Q8N0T1 100 aaPredicted RBP15.98■□□□□ 0.15
TSPAN4-219ENST00000530404 TMED9Q9BVK6 235 aa15.98■□□□□ 0.15
TSPAN4-219ENST00000530404 OR1A1Q9P1Q5 309 aa15.98■□□□□ 0.15
TSPAN4-219ENST00000530404 OR5H14A6NHG9 310 aa15.97■□□□□ 0.15
TSPAN4-219ENST00000530404 LINC00205P59089 165 aa15.97■□□□□ 0.15
TSPAN4-219ENST00000530404 TPPP2P59282 170 aa15.97■□□□□ 0.15
TSPAN4-219ENST00000530404 PITPNAQ00169 270 aa15.97■□□□□ 0.15
TSPAN4-219ENST00000530404 ACTBL2Q562R1 376 aa15.97■□□□□ 0.15
TSPAN4-219ENST00000530404 GLT8D1Q68CQ7 371 aa15.97■□□□□ 0.15
TSPAN4-219ENST00000530404 DRAXINQ8NBI3 349 aaPredicted RBP15.97■□□□□ 0.15
TSPAN4-219ENST00000530404 LFNGQ8NES3 379 aa15.97■□□□□ 0.15
TSPAN4-219ENST00000530404 OR6Q1Q8NGQ2 317 aa15.97■□□□□ 0.15
TSPAN4-219ENST00000530404 THRSPQ92748 146 aa15.97■□□□□ 0.15
TSPAN4-219ENST00000530404 TM2D1Q9BX74 207 aa15.97■□□□□ 0.15
TSPAN4-219ENST00000530404 GHITMQ9H3K2 345 aa15.97■□□□□ 0.15
TSPAN4-219ENST00000530404 METTL1Q9UBP6 276 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-219ENST00000530404 WASHC3Q9Y3C0 194 aa15.97■□□□□ 0.15
TSPAN4-219ENST00000530404 DNAH1Q9P2D7 4330 aa15.97■□□□□ 0.15
TSPAN4-219ENST00000530404 CA2P00918 260 aa15.96■□□□□ 0.15
TSPAN4-219ENST00000530404 C1orf100Q5SVJ3 147 aa15.96■□□□□ 0.15
TSPAN4-219ENST00000530404 TCTEX1D1Q8N7M0 179 aa15.96■□□□□ 0.15
TSPAN4-219ENST00000530404 PLEKHJ1Q9NW61 149 aa15.96■□□□□ 0.15
TSPAN4-219ENST00000530404 AK3Q9UIJ7 227 aa15.96■□□□□ 0.15
TSPAN4-219ENST00000530404 RNF150Q9ULK6 438 aa15.96■□□□□ 0.15
TSPAN4-219ENST00000530404 TMEM14DPA8MWL7 114 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms