RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 TCL1AP56279 114 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 RND3P61587 244 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 NAAAQ02083 359 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 UHRF2Q96PU4 802 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 TOLLIPQ9H0E2 274 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 PNRC2Q9NPJ4 139 aaKnown RBP10.56□□□□□ -0.72
SCN3B-206ENST00000530277 GSN-AS1Q9NRJ2 163 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 GAR1Q9NY12 217 aaKnown RBP10.56□□□□□ -0.72
SCN3B-206ENST00000530277 PRRG2O14669 202 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 HSPB1P04792 205 aaKnown RBP10.56□□□□□ -0.72
SCN3B-206ENST00000530277 LINC00205P59089 165 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 SLC35B1P78383 322 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 VWA1Q6PCB0 445 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 KCNIP4Q6PIL6 250 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 NABP1Q96AH0 204 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 ZNF703Q9H7S9 590 aaPredicted RBP10.56□□□□□ -0.72
SCN3B-206ENST00000530277 RNF122Q9H9V4 155 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 PTPN13Q12923 2485 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 CXorf65A6NEN9 183 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 LRRC3CA6NJW4 275 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 A8MXE2 369 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 HBZP02008 142 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 CCL20P78556 96 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 COL10A1Q03692 680 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 ZNF90Q03938 601 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 STUMQ69YW2 141 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 SELENOHQ8IZQ5 122 aaKnown RBP10.56□□□□□ -0.72
SCN3B-206ENST00000530277 FGFRL1Q8N441 504 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 ZNF383Q8NA42 475 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 ZNRF1Q8ND25 227 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 OR4C12Q96R67 309 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 ZNF251Q9BRH9 671 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 TCEAL7Q9BRU2 100 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 OTOGLQ3ZCN5 2332 aa10.56□□□□□ -0.72
SCN3B-206ENST00000530277 OBSL1O75147 1896 aa10.55□□□□□ -0.72
SCN3B-206ENST00000530277 ZNF716A6NP11 495 aa10.55□□□□□ -0.72
SCN3B-206ENST00000530277 NTF4P34130 210 aa10.55□□□□□ -0.72
SCN3B-206ENST00000530277 BTNL8Q6UX41 500 aa10.55□□□□□ -0.72
SCN3B-206ENST00000530277 ZCCHC24Q8N2G6 241 aaKnown RBP10.55□□□□□ -0.72
SCN3B-206ENST00000530277 REG4Q9BYZ8 158 aa10.55□□□□□ -0.72
SCN3B-206ENST00000530277 COMMD5Q9GZQ3 224 aa10.55□□□□□ -0.72
SCN3B-206ENST00000530277 Q9N2K0 584 aa10.55□□□□□ -0.72
SCN3B-206ENST00000530277 YLPM1P49750 1951 aaKnown RBP10.55□□□□□ -0.72
SCN3B-206ENST00000530277 CASP6P55212 293 aa10.55□□□□□ -0.72
SCN3B-206ENST00000530277 CISD2Q8N5K1 135 aaKnown RBP10.55□□□□□ -0.72
SCN3B-206ENST00000530277 EDARADDQ8WWZ3 215 aa10.55□□□□□ -0.72
SCN3B-206ENST00000530277 R3HDM4Q96D70 268 aa10.55□□□□□ -0.72
SCN3B-206ENST00000530277 TECTAO75443 2155 aa10.55□□□□□ -0.72
SCN3B-206ENST00000530277 KIAA1324LA8MWY0 1029 aaPredicted RBP10.55□□□□□ -0.72
SCN3B-206ENST00000530277 TRGC2P03986 189 aa10.55□□□□□ -0.72
SCN3B-206ENST00000530277 H3F3AP84243 136 aa10.55□□□□□ -0.72
SCN3B-206ENST00000530277 MZT1Q08AG7 82 aa10.55□□□□□ -0.72
SCN3B-206ENST00000530277 IL24Q13007 206 aa10.55□□□□□ -0.72
SCN3B-206ENST00000530277 RIPPLY2Q5TAB7 128 aa10.55□□□□□ -0.72
SCN3B-206ENST00000530277 DNPH1O43598 174 aa10.54□□□□□ -0.72
SCN3B-206ENST00000530277 S100A8P05109 93 aa10.54□□□□□ -0.72
SCN3B-206ENST00000530277 KLF14Q8TD94 323 aaPredicted RBP10.54□□□□□ -0.72
SCN3B-206ENST00000530277 RPRMQ9NS64 109 aa10.54□□□□□ -0.72
SCN3B-206ENST00000530277 IGHV3-72A0A0B4J1Y9 119 aa10.54□□□□□ -0.72
SCN3B-206ENST00000530277 CLDN34H7C241 214 aa10.54□□□□□ -0.72
SCN3B-206ENST00000530277 ZG16O60844 167 aa10.54□□□□□ -0.72
SCN3B-206ENST00000530277 PRB4P10163 310 aaPredicted RBP10.54□□□□□ -0.72
SCN3B-206ENST00000530277 ZDHHC16Q969W1 377 aa10.54□□□□□ -0.72
SCN3B-206ENST00000530277 TGIF2-C20orf24A0A0A6YYL0 155 aa10.54□□□□□ -0.72
SCN3B-206ENST00000530277 TRAV38-1A0A0B4J264 116 aa10.54□□□□□ -0.72
SCN3B-206ENST00000530277 CLDN14O95500 239 aa10.54□□□□□ -0.72
SCN3B-206ENST00000530277 MMP7P09237 267 aaPredicted RBP10.54□□□□□ -0.72
SCN3B-206ENST00000530277 FAM78BQ5VT40 261 aa10.54□□□□□ -0.72
SCN3B-206ENST00000530277 COMMD1Q8N668 190 aa10.54□□□□□ -0.72
SCN3B-206ENST00000530277 TRGV10A0A0A0MS01 117 aa10.53□□□□□ -0.72
SCN3B-206ENST00000530277 C21orf140B9A014 251 aa10.53□□□□□ -0.72
SCN3B-206ENST00000530277 NEURL1O76050 574 aa10.53□□□□□ -0.72
SCN3B-206ENST00000530277 S1PR2O95136 353 aa10.53□□□□□ -0.72
SCN3B-206ENST00000530277 CNIH1O95406 144 aa10.53□□□□□ -0.72
SCN3B-206ENST00000530277 CD55P08174 381 aa10.53□□□□□ -0.72
SCN3B-206ENST00000530277 ACAA1P09110 424 aaPredicted RBP10.53□□□□□ -0.72
SCN3B-206ENST00000530277 TNFAIP6P98066 277 aaPredicted RBP10.53□□□□□ -0.72
SCN3B-206ENST00000530277 ACOT6Q3I5F7 207 aaPredicted RBP10.53□□□□□ -0.72
SCN3B-206ENST00000530277 ZNF705AQ6ZN79 300 aaPredicted RBP10.53□□□□□ -0.72
SCN3B-206ENST00000530277 FAM214BQ7L5A3 538 aa10.53□□□□□ -0.72
SCN3B-206ENST00000530277 GGNQ86UU5 652 aa10.53□□□□□ -0.72
SCN3B-206ENST00000530277 Q8IYB0 196 aa10.53□□□□□ -0.72
SCN3B-206ENST00000530277 MALRD1Q5VYJ5 2156 aa10.53□□□□□ -0.72
SCN3B-206ENST00000530277 CDC34P49427 236 aaPredicted RBP10.53□□□□□ -0.72
SCN3B-206ENST00000530277 KLF3P57682 345 aaPredicted RBP10.53□□□□□ -0.72
SCN3B-206ENST00000530277 TMEM241Q24JQ0 296 aa10.53□□□□□ -0.72
SCN3B-206ENST00000530277 FAM53AQ6NSI3 398 aaPredicted RBP10.53□□□□□ -0.72
SCN3B-206ENST00000530277 OR5D13Q8NGL4 314 aa10.53□□□□□ -0.72
SCN3B-206ENST00000530277 WBP1Q96G27 269 aa10.53□□□□□ -0.72
SCN3B-206ENST00000530277 CCL13Q99616 98 aa10.53□□□□□ -0.72
SCN3B-206ENST00000530277 WFDC1Q9HC57 220 aa10.53□□□□□ -0.72
SCN3B-206ENST00000530277 COX7A1P24310 79 aa10.53□□□□□ -0.72
SCN3B-206ENST00000530277 QRFPP83859 136 aa10.53□□□□□ -0.72
SCN3B-206ENST00000530277 GFRALQ6UXV0 394 aa10.53□□□□□ -0.72
SCN3B-206ENST00000530277 ZNF355PQ9NSJ1 428 aa10.53□□□□□ -0.72
SCN3B-206ENST00000530277 CHD8Q9HCK8 2581 aa10.53□□□□□ -0.72
SCN3B-206ENST00000530277 ANKHD1Q8IWZ3 2542 aaKnown RBP10.53□□□□□ -0.72
SCN3B-206ENST00000530277 SP9P0CG40 484 aa10.52□□□□□ -0.72
SCN3B-206ENST00000530277 MDH2P40926 338 aaKnown RBP10.52□□□□□ -0.72
SCN3B-206ENST00000530277 THBS3P49746 956 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms