RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 ZNF79Q15937 498 aa6.47□□□□□ -1.37
SSBP3-211ENST00000528787 ABCA11PQ4W5N1 156 aa6.47□□□□□ -1.37
SSBP3-211ENST00000528787 C16orf87Q6PH81 154 aa6.47□□□□□ -1.37
SSBP3-211ENST00000528787 C16orf82Q7Z2V1 217 aa6.47□□□□□ -1.37
SSBP3-211ENST00000528787 TGIF2LXQ8IUE1 241 aa6.47□□□□□ -1.37
SSBP3-211ENST00000528787 LYG1Q8N1E2 194 aa6.47□□□□□ -1.37
SSBP3-211ENST00000528787 FGFRL1Q8N441 504 aa6.47□□□□□ -1.37
SSBP3-211ENST00000528787 ZNF645Q8N7E2 425 aa6.47□□□□□ -1.37
SSBP3-211ENST00000528787 GVQW1Q8N7I0 195 aa6.47□□□□□ -1.37
SSBP3-211ENST00000528787 TERB2Q8NHR7 220 aa6.47□□□□□ -1.37
SSBP3-211ENST00000528787 ZNF2Q9BSG1 426 aaPredicted RBP6.47□□□□□ -1.37
SSBP3-211ENST00000528787 FAM212BQ9NTI7 297 aaPredicted RBP6.47□□□□□ -1.37
SSBP3-211ENST00000528787 MCUBQ9NWR8 336 aa6.47□□□□□ -1.37
SSBP3-211ENST00000528787 SLC2A8Q9NY64 477 aa6.47□□□□□ -1.37
SSBP3-211ENST00000528787 ZNF581Q9P0T4 197 aa6.47□□□□□ -1.37
SSBP3-211ENST00000528787 KLK11Q9UBX7 282 aa6.47□□□□□ -1.37
SSBP3-211ENST00000528787 C14orf166Q9Y224 244 aaKnown RBP6.47□□□□□ -1.37
SSBP3-211ENST00000528787 OTOGQ6ZRI0 2925 aa6.46□□□□□ -1.37
SSBP3-211ENST00000528787 TRAV39A0A0B4J263 110 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 MEIS3P1A6NDR6 274 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 OR5H14A6NHG9 310 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 VGLL3A8MV65 326 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 RNASEK-C17orf49H0YIS7 233 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 M0QZK8 103 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 HSD17B6O14756 317 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 CREBL2O60519 120 aaPredicted RBP6.46□□□□□ -1.38
SSBP3-211ENST00000528787 FSHBP01225 129 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 PMP2P02689 132 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 CD3DP04234 171 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 ANXA3P12429 323 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 IL7P13232 177 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 SAA4P35542 130 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 PPP1CCP36873 323 aaKnown RBP6.46□□□□□ -1.38
SSBP3-211ENST00000528787 THBS3P49746 956 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 RBMS2Q15434 407 aaKnown RBP6.46□□□□□ -1.38
SSBP3-211ENST00000528787 RTL8BQ17RB0 113 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 IGSF11Q5DX21 431 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 TPTE2P1Q5T6R2 138 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 DHRS7BQ6IAN0 325 aaPredicted RBP6.46□□□□□ -1.38
SSBP3-211ENST00000528787 ZNF66Q6ZN08 573 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 THNSL2Q86YJ6 484 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 LYSMD2Q8IV50 215 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 OR8H1Q8NGG4 311 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 OR52L2PQ8NGH6 319 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 SSMEM1Q8WWF3 244 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 MOB3AQ96BX8 217 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 RNF5Q99942 180 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 SLC5A7Q9GZV3 580 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 C11orf54Q9H0W9 315 aaPredicted RBP6.46□□□□□ -1.38
SSBP3-211ENST00000528787 MEGF9Q9H1U4 602 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 OR2D2Q9H210 308 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 LIN7CQ9NUP9 197 aaKnown RBP6.46□□□□□ -1.38
SSBP3-211ENST00000528787 C1RLQ9NZP8 487 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 CACFD1Q9UGQ2 172 aa6.46□□□□□ -1.38
SSBP3-211ENST00000528787 CSPG4Q6UVK1 2322 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 IGHV3-43A0A0B4J1X8 118 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 GPR31O00270 319 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 CRLF1O75462 422 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 UPK1BO75841 260 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 TUSC2O75896 110 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 OR8U9P0C7N5 309 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 IGHV3-43DP0DP04 118 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 PTHLHP12272 177 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 PGAM2P15259 253 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 CD1BP29016 333 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 RBMXP38159 391 aaKnown RBP6.45□□□□□ -1.38
SSBP3-211ENST00000528787 UBE2MP61081 183 aaKnown RBP6.45□□□□□ -1.38
SSBP3-211ENST00000528787 HERPUD1Q15011 391 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 LRRC75BQ2VPJ9 315 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 SCGB2B2Q4G0G5 96 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 CT45A1Q5HYN5 189 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 IDO2Q6ZQW0 420 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 ZNF833PQ6ZTB9 187 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 LDLRAD3Q86YD5 345 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 PDPNQ86YL7 162 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 ZDHHC22Q8N966 263 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 ZNF439Q8NDP4 499 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 OR4P4Q8NGL7 312 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 OR8U1Q8NH10 309 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 CT45A3Q8NHU0 189 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 MAFIPQ8WZ33 124 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 TRIM63Q969Q1 353 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 ELF5Q9UKW6 265 aaPredicted RBP6.45□□□□□ -1.38
SSBP3-211ENST00000528787 KCNIP3Q9Y2W7 256 aa6.45□□□□□ -1.38
SSBP3-211ENST00000528787 VPS13CQ709C8 3753 aa6.44□□□□□ -1.38
SSBP3-211ENST00000528787 SAA2-SAA4A0A096LPE2 208 aa6.44□□□□□ -1.38
SSBP3-211ENST00000528787 CLDN34H7C241 214 aa6.44□□□□□ -1.38
SSBP3-211ENST00000528787 LYRM1O43325 122 aa6.44□□□□□ -1.38
SSBP3-211ENST00000528787 TCF21O43680 179 aa6.44□□□□□ -1.38
SSBP3-211ENST00000528787 SAA2P0DJI9 122 aaPredicted RBP6.44□□□□□ -1.38
SSBP3-211ENST00000528787 IGHV4-38-2P0DP08 117 aa6.44□□□□□ -1.38
SSBP3-211ENST00000528787 RPA2P15927 270 aa6.44□□□□□ -1.38
SSBP3-211ENST00000528787 NFYAP23511 347 aaPredicted RBP6.44□□□□□ -1.38
SSBP3-211ENST00000528787 SRPXP78539 464 aa6.44□□□□□ -1.38
SSBP3-211ENST00000528787 KRTAP1-1Q07627 177 aa6.44□□□□□ -1.38
SSBP3-211ENST00000528787 ASAH1Q13510 395 aa6.44□□□□□ -1.38
SSBP3-211ENST00000528787 KLF9Q13886 244 aaPredicted RBP6.44□□□□□ -1.38
SSBP3-211ENST00000528787 RNASE12Q5GAN4 147 aaKnown RBP6.44□□□□□ -1.38
SSBP3-211ENST00000528787 Q6YL49 198 aa6.44□□□□□ -1.38
SSBP3-211ENST00000528787 KCTD9Q7L273 389 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms