RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 PNKDQ8N490 385 aa9.91□□□□□ -0.82
TRAF3IP2-211ENST00000528599 ZNF439Q8NDP4 499 aa9.91□□□□□ -0.82
TRAF3IP2-211ENST00000528599 LHX4Q969G2 390 aa9.91□□□□□ -0.82
TRAF3IP2-211ENST00000528599 ZNF486Q96H40 463 aaPredicted RBP9.91□□□□□ -0.82
TRAF3IP2-211ENST00000528599 YPEL2Q96QA6 119 aa9.91□□□□□ -0.82
TRAF3IP2-211ENST00000528599 SLC6A7Q99884 636 aa9.91□□□□□ -0.82
TRAF3IP2-211ENST00000528599 GINS4Q9BRT9 223 aa9.91□□□□□ -0.82
TRAF3IP2-211ENST00000528599 HEXA-AS1Q9H8Q6 139 aa9.91□□□□□ -0.82
TRAF3IP2-211ENST00000528599 RANGRFQ9HD47 186 aaPredicted RBP9.91□□□□□ -0.82
TRAF3IP2-211ENST00000528599 RDH8Q9NYR8 311 aa9.91□□□□□ -0.82
TRAF3IP2-211ENST00000528599 ZNRD1Q9P1U0 126 aa9.91□□□□□ -0.82
TRAF3IP2-211ENST00000528599 HIVEP2P31629 2446 aa9.91□□□□□ -0.82
TRAF3IP2-211ENST00000528599 TRAV6A0A075B6T7 132 aa9.9□□□□□ -0.82
TRAF3IP2-211ENST00000528599 IGHV2-26A0A0B4J1V2 119 aa9.9□□□□□ -0.82
TRAF3IP2-211ENST00000528599 SLC31A2O15432 143 aa9.9□□□□□ -0.82
TRAF3IP2-211ENST00000528599 TUSC2O75896 110 aa9.9□□□□□ -0.82
TRAF3IP2-211ENST00000528599 FCGR2CP31995 323 aa9.9□□□□□ -0.82
TRAF3IP2-211ENST00000528599 GNG10P50151 68 aa9.9□□□□□ -0.82
TRAF3IP2-211ENST00000528599 CT45A1Q5HYN5 189 aa9.9□□□□□ -0.82
TRAF3IP2-211ENST00000528599 DHRS11Q6UWP2 260 aa9.9□□□□□ -0.82
TRAF3IP2-211ENST00000528599 NOXA1Q86UR1 476 aa9.9□□□□□ -0.82
TRAF3IP2-211ENST00000528599 LDLRAD3Q86YD5 345 aa9.9□□□□□ -0.82
TRAF3IP2-211ENST00000528599 CT45A3Q8NHU0 189 aa9.9□□□□□ -0.82
TRAF3IP2-211ENST00000528599 C20orf85Q9H1P6 137 aa9.9□□□□□ -0.82
TRAF3IP2-211ENST00000528599 MED28Q9H204 178 aa9.9□□□□□ -0.82
TRAF3IP2-211ENST00000528599 OR51J1Q9H342 316 aa9.9□□□□□ -0.82
TRAF3IP2-211ENST00000528599 MCUBQ9NWR8 336 aa9.9□□□□□ -0.82
TRAF3IP2-211ENST00000528599 ZNF69Q9UC07 566 aa9.9□□□□□ -0.82
TRAF3IP2-211ENST00000528599 PAIP2BQ9ULR5 123 aaKnown RBP9.9□□□□□ -0.82
TRAF3IP2-211ENST00000528599 CENPVL3A0A0U1RRI6 287 aa9.9□□□□□ -0.83
TRAF3IP2-211ENST00000528599 A0A1W2PRD5 423 aa9.9□□□□□ -0.83
TRAF3IP2-211ENST00000528599 A0A1W2PRF3 423 aa9.9□□□□□ -0.83
TRAF3IP2-211ENST00000528599 A0A1W2PRM7 423 aa9.9□□□□□ -0.83
TRAF3IP2-211ENST00000528599 C1QBP02746 253 aa9.9□□□□□ -0.83
TRAF3IP2-211ENST00000528599 AMY2AP04746 511 aa9.9□□□□□ -0.83
TRAF3IP2-211ENST00000528599 AADACP22760 399 aa9.9□□□□□ -0.83
TRAF3IP2-211ENST00000528599 KLF17Q5JT82 389 aaPredicted RBP9.9□□□□□ -0.83
TRAF3IP2-211ENST00000528599 LY6G6FQ5SQ64 297 aa9.9□□□□□ -0.83
TRAF3IP2-211ENST00000528599 NCR3LG1Q68D85 454 aa9.9□□□□□ -0.83
TRAF3IP2-211ENST00000528599 OR11H6Q8NGC7 330 aa9.9□□□□□ -0.83
TRAF3IP2-211ENST00000528599 OR13D1Q8NGV5 346 aa9.9□□□□□ -0.83
TRAF3IP2-211ENST00000528599 OR9G1Q8NH87 305 aa9.9□□□□□ -0.83
TRAF3IP2-211ENST00000528599 GIMAP1Q8WWP7 306 aa9.9□□□□□ -0.83
TRAF3IP2-211ENST00000528599 CLEC7AQ9BXN2 247 aa9.9□□□□□ -0.83
TRAF3IP2-211ENST00000528599 ALX4Q9H161 411 aaPredicted RBP9.9□□□□□ -0.83
TRAF3IP2-211ENST00000528599 YAE1D1Q9NRH1 226 aa9.9□□□□□ -0.83
TRAF3IP2-211ENST00000528599 KCNS2Q9ULS6 477 aa9.9□□□□□ -0.83
TRAF3IP2-211ENST00000528599 IGHV3OR16-10A0A075B7F0 116 aa9.89□□□□□ -0.83
TRAF3IP2-211ENST00000528599 SNRPGP15A8MWD9 76 aa9.89□□□□□ -0.83
TRAF3IP2-211ENST00000528599 J3QR06 171 aa9.89□□□□□ -0.83
TRAF3IP2-211ENST00000528599 RGS11O94810 467 aa9.89□□□□□ -0.83
TRAF3IP2-211ENST00000528599 IGLV1-47P01700 117 aa9.89□□□□□ -0.83
TRAF3IP2-211ENST00000528599 IFNA6P05013 189 aa9.89□□□□□ -0.83
TRAF3IP2-211ENST00000528599 IGHV4-38-2P0DP08 117 aa9.89□□□□□ -0.83
TRAF3IP2-211ENST00000528599 TSPAN5P62079 268 aa9.89□□□□□ -0.83
TRAF3IP2-211ENST00000528599 CD83Q01151 205 aa9.89□□□□□ -0.83
TRAF3IP2-211ENST00000528599 MEF2DQ14814 521 aa9.89□□□□□ -0.83
TRAF3IP2-211ENST00000528599 RBMS2Q15434 407 aaKnown RBP9.89□□□□□ -0.83
TRAF3IP2-211ENST00000528599 Q3ZCU0 254 aa9.89□□□□□ -0.83
TRAF3IP2-211ENST00000528599 SLC25A48Q6ZT89 311 aaKnown RBP9.89□□□□□ -0.83
TRAF3IP2-211ENST00000528599 C8orf31Q8N9H6 132 aa9.89□□□□□ -0.83
TRAF3IP2-211ENST00000528599 ZNF596Q8TC21 504 aa9.89□□□□□ -0.83
TRAF3IP2-211ENST00000528599 FYTTD1Q96QD9 318 aaKnown RBP9.89□□□□□ -0.83
TRAF3IP2-211ENST00000528599 SLC25A21Q9BQT8 299 aaPredicted RBP9.89□□□□□ -0.83
TRAF3IP2-211ENST00000528599 ZNF2Q9BSG1 426 aaPredicted RBP9.89□□□□□ -0.83
TRAF3IP2-211ENST00000528599 OR2W1Q9Y3N9 320 aa9.89□□□□□ -0.83
TRAF3IP2-211ENST00000528599 NAV3Q8IVL0 2385 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 TRAV40A0A0B4J280 105 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 IGKV1D-13A0A0B4J2D9 117 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 ODF3BA8MYP8 253 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 ITGB1BP1O14713 200 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 ST8SIA5O15466 376 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 PPYP01298 95 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 OR8U9P0C7N5 309 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 IGKV1-13P0DP09 117 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 UBE2E1P51965 193 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 LDLRAD2Q5SZI1 272 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 ZNF626Q68DY1 528 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 GLDNQ6ZMI3 551 aaPredicted RBP9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 ARRDC1Q8N5I2 433 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 LINC00311Q8N616 119 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 OR2AK2Q8NG84 335 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 OR51S1Q8NGJ8 323 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 OR8U1Q8NH10 309 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 MRGPRFQ96AM1 343 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 AGMATQ9BSE5 352 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 ABHD14AQ9BUJ0 271 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 IFI27L2Q9H2X8 130 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 RNF150Q9ULK6 438 aa9.88□□□□□ -0.83
TRAF3IP2-211ENST00000528599 IGHV1-69DA0A0B4J2H0 117 aa9.87□□□□□ -0.83
TRAF3IP2-211ENST00000528599 OR5H14A6NHG9 310 aa9.87□□□□□ -0.83
TRAF3IP2-211ENST00000528599 A8MV72 311 aaPredicted RBP9.87□□□□□ -0.83
TRAF3IP2-211ENST00000528599 DISC1C4P0D8 188 aa9.87□□□□□ -0.83
TRAF3IP2-211ENST00000528599 INAFM1C9JVW0 142 aa9.87□□□□□ -0.83
TRAF3IP2-211ENST00000528599 TOR1AO14656 332 aa9.87□□□□□ -0.83
TRAF3IP2-211ENST00000528599 FSHBP01225 129 aa9.87□□□□□ -0.83
TRAF3IP2-211ENST00000528599 IGHV1-69P01742 117 aa9.87□□□□□ -0.83
TRAF3IP2-211ENST00000528599 ARG1P05089 322 aa9.87□□□□□ -0.83
TRAF3IP2-211ENST00000528599 SULT1A3P0DMM9 295 aa9.87□□□□□ -0.83
TRAF3IP2-211ENST00000528599 SULT1A4P0DMN0 295 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms