RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 PINX1Q96BK5 328 aaKnown RBP15.37■□□□□ 0.05
LTBP3-210ENST00000528516 TP53RKQ96S44 253 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 GLRX2Q9NS18 164 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 NAT8Q9UHE5 227 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 PCNX2A6NKB5 2137 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 FREM1Q5H8C1 2179 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 SPRY3O43610 288 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 CEACAM1P13688 526 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 MPLP40238 635 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 CNN1P51911 297 aaKnown RBP15.37■□□□□ 0.05
LTBP3-210ENST00000528516 FAM3BP58499 235 aaPredicted RBP15.37■□□□□ 0.05
LTBP3-210ENST00000528516 HTD2P86397 168 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 DEFB109BQ30KR1 87 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 HES3Q5TGS1 186 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 CT55Q8WUE5 264 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 APOBEC3DQ96AK3 386 aaPredicted RBP15.37■□□□□ 0.05
LTBP3-210ENST00000528516 CLDN23Q96B33 292 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 ACY3Q96HD9 319 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 VAMP8Q9BV40 100 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 Q9N2K0 584 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 TRAPPC1Q9Y5R8 145 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 PSMB3P49720 205 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 IL11RAQ14626 422 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 ATP1A1-AS1Q5TC04 95 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 C1orf147Q96MC9 270 aaPredicted RBP15.37■□□□□ 0.05
LTBP3-210ENST00000528516 RPRMQ9NS64 109 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 PSG11Q9UQ72 335 aa15.37■□□□□ 0.05
LTBP3-210ENST00000528516 C20orf202A1L168 122 aa15.36■□□□□ 0.05
LTBP3-210ENST00000528516 SH2D1BO14796 132 aa15.36■□□□□ 0.05
LTBP3-210ENST00000528516 FAM90A2PQ658T7 463 aa15.36■□□□□ 0.05
LTBP3-210ENST00000528516 FOXJ2Q9P0K8 574 aa15.36■□□□□ 0.05
LTBP3-210ENST00000528516 IGKV1-9A0A0C4DH69 117 aa15.36■□□□□ 0.05
LTBP3-210ENST00000528516 MPPED1O15442 326 aa15.36■□□□□ 0.05
LTBP3-210ENST00000528516 RAB31Q13636 194 aa15.36■□□□□ 0.05
LTBP3-210ENST00000528516 MAP1LC3B2A6NCE7 125 aa15.36■□□□□ 0.05
LTBP3-210ENST00000528516 ZNF737O75373 536 aa15.36■□□□□ 0.05
LTBP3-210ENST00000528516 GNG3P63215 75 aa15.36■□□□□ 0.05
LTBP3-210ENST00000528516 RPL19P84098 196 aaKnown RBP15.36■□□□□ 0.05
LTBP3-210ENST00000528516 DPPA3Q6W0C5 159 aa15.36■□□□□ 0.05
LTBP3-210ENST00000528516 ATP5SQ99766 215 aa15.36■□□□□ 0.05
LTBP3-210ENST00000528516 MAP1LC3BQ9GZQ8 125 aa15.36■□□□□ 0.05
LTBP3-210ENST00000528516 TRAV34A0A0B4J273 112 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 HOXA6P31267 233 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 RND2P52198 227 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 GNB2P62879 340 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 FAM78BQ5VT40 261 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 FNDC7Q5VTL7 733 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 OR2Z1Q8NG97 314 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 OR10P1Q8NGE3 313 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 OR10S1Q8NGN2 331 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 VN1R17PQ8TDU5 208 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 TMEM204Q9BSN7 226 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 RBKSQ9H477 322 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 POLR3KQ9Y2Y1 108 aaPredicted RBP15.35■□□□□ 0.05
LTBP3-210ENST00000528516 H0Y8G0 127 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 SPINT2O43291 252 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 C1orf194Q5T5A4 169 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 OR8G5Q8NG78 346 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 A0A1B0GUS0 222 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 SRD5A2P31213 254 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 H1FOOQ8IZA3 346 aaPredicted RBP15.35■□□□□ 0.05
LTBP3-210ENST00000528516 TMEM178AQ8NBL3 297 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 TXN2Q99757 166 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 LIME1Q9H400 295 aa15.35■□□□□ 0.05
LTBP3-210ENST00000528516 LYRM2Q9NU23 88 aaPredicted RBP15.35■□□□□ 0.05
LTBP3-210ENST00000528516 TRGV5A0A0B4J1U4 118 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 CBY3A6NI87 242 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 CEBPDP49716 269 aaPredicted RBP15.34■□□□□ 0.05
LTBP3-210ENST00000528516 RCC1LQ96I51 464 aaKnown RBP15.34■□□□□ 0.05
LTBP3-210ENST00000528516 OR2H1Q9GZK4 316 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 ASCL3Q9NQ33 180 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 ANAPC10Q9UM13 185 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 LRRC3CA6NJW4 275 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 PROB1E7EW31 1015 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 CA11O75493 328 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 TOX4O94842 621 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 IGLV3-21P80748 117 aaPredicted RBP15.34■□□□□ 0.05
LTBP3-210ENST00000528516 KCNE4Q8WWG9 221 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 LPAR2Q9HBW0 351 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 ZNF391Q9UJN7 358 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 PTPRQQ9UMZ3 2332 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 NUP210LQ5VU65 1888 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 M0R1B8 84 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 SYNGR1O43759 233 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 LINC00614P0C842 121 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 TMEM11P17152 192 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 MEOX1P50221 254 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 ZNF83P51522 516 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 FAM103A1Q9BTL3 118 aaKnown RBP15.34■□□□□ 0.05
LTBP3-210ENST00000528516 GPR35Q9HC97 309 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 TMEM38BQ9NVV0 291 aa15.34■□□□□ 0.05
LTBP3-210ENST00000528516 CDS2O95674 445 aa15.33■□□□□ 0.05
LTBP3-210ENST00000528516 IGHEP01854 428 aa15.33■□□□□ 0.05
LTBP3-210ENST00000528516 ZNF826PQ6ZT77 177 aa15.33■□□□□ 0.05
LTBP3-210ENST00000528516 SRXN1Q9BYN0 137 aa15.33■□□□□ 0.05
LTBP3-210ENST00000528516 CISD1Q9NZ45 108 aaKnown RBP15.33■□□□□ 0.05
LTBP3-210ENST00000528516 SPTBN5Q9NRC6 3674 aaKnown RBP15.33■□□□□ 0.04
LTBP3-210ENST00000528516 A0A0G2JMM0 328 aa15.33■□□□□ 0.04
LTBP3-210ENST00000528516 A0A1W2PPB8 328 aa15.33■□□□□ 0.04
LTBP3-210ENST00000528516 A0A1W2PRS3 328 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms