RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 ZFP57Q9NU63 452 aa26.04■■□□□ 1.76
SSSCA1-205ENST00000527920 KCNK7Q9Y2U2 307 aa26.04■■□□□ 1.76
SSSCA1-205ENST00000527920 LINC01548A6NM66 108 aa26.03■■□□□ 1.76
SSSCA1-205ENST00000527920 RPL23AP62750 156 aaKnown RBP26.03■■□□□ 1.76
SSSCA1-205ENST00000527920 MMDQ15546 238 aa26.03■■□□□ 1.76
SSSCA1-205ENST00000527920 LINC00527Q9UJ94 153 aa26.03■■□□□ 1.76
SSSCA1-205ENST00000527920 STUB1Q9UNE7 303 aa26.03■■□□□ 1.76
SSSCA1-205ENST00000527920 RRP9O43818 475 aaKnown RBP26.02■■□□□ 1.76
SSSCA1-205ENST00000527920 PF4P02776 101 aa26.02■■□□□ 1.76
SSSCA1-205ENST00000527920 SCTP09683 121 aa26.02■■□□□ 1.76
SSSCA1-205ENST00000527920 GADD45AP24522 165 aa26.02■■□□□ 1.76
SSSCA1-205ENST00000527920 NR2C2APQ86WQ0 139 aa26.02■■□□□ 1.76
SSSCA1-205ENST00000527920 OR10R2Q8NGX6 335 aa26.02■■□□□ 1.76
SSSCA1-205ENST00000527920 PARP12Q9H0J9 701 aaKnown RBP26.02■■□□□ 1.76
SSSCA1-205ENST00000527920 TXNL4BQ9NX01 149 aaKnown RBP26.02■■□□□ 1.76
SSSCA1-205ENST00000527920 RAB27BO00194 218 aa26.01■■□□□ 1.75
SSSCA1-205ENST00000527920 HSPA12AO43301 675 aa26.01■■□□□ 1.75
SSSCA1-205ENST00000527920 CEACAM6P40199 344 aa26.01■■□□□ 1.75
SSSCA1-205ENST00000527920 ACTBP60709 375 aa26.01■■□□□ 1.75
SSSCA1-205ENST00000527920 MRPS15P82914 257 aaKnown RBP26.01■■□□□ 1.75
SSSCA1-205ENST00000527920 TEX38Q6PEX7 206 aa26.01■■□□□ 1.75
SSSCA1-205ENST00000527920 TPRA1Q86W33 373 aa26.01■■□□□ 1.75
SSSCA1-205ENST00000527920 PHF21AQ96BD5 680 aa26.01■■□□□ 1.75
SSSCA1-205ENST00000527920 OR1A1Q9P1Q5 309 aa26.01■■□□□ 1.75
SSSCA1-205ENST00000527920 METTL21EPA6NDL7 271 aa26■■□□□ 1.75
SSSCA1-205ENST00000527920 TRDCB7Z8K6 153 aa26■■□□□ 1.75
SSSCA1-205ENST00000527920 DIRAS3O95661 229 aa26■■□□□ 1.75
SSSCA1-205ENST00000527920 IGF1P05019 195 aa26■■□□□ 1.75
SSSCA1-205ENST00000527920 CD3GP09693 182 aa26■■□□□ 1.75
SSSCA1-205ENST00000527920 CD33P20138 364 aa26■■□□□ 1.75
SSSCA1-205ENST00000527920 PNLIPRP3Q17RR3 467 aa26■■□□□ 1.75
SSSCA1-205ENST00000527920 MOGAT2Q3SYC2 334 aa26■■□□□ 1.75
SSSCA1-205ENST00000527920 HSPB9Q9BQS6 159 aa26■■□□□ 1.75
SSSCA1-205ENST00000527920 C11orf54Q9H0W9 315 aaPredicted RBP26■■□□□ 1.75
SSSCA1-205ENST00000527920 OR5H14A6NHG9 310 aa25.99■■□□□ 1.75
SSSCA1-205ENST00000527920 NOTOA8MTQ0 251 aa25.99■■□□□ 1.75
SSSCA1-205ENST00000527920 MFNGO00587 321 aa25.99■■□□□ 1.75
SSSCA1-205ENST00000527920 HIST1H1DP16402 221 aaKnown RBP25.99■■□□□ 1.75
SSSCA1-205ENST00000527920 SERPINB10P48595 397 aa25.99■■□□□ 1.75
SSSCA1-205ENST00000527920 KCTD21Q4G0X4 260 aa25.99■■□□□ 1.75
SSSCA1-205ENST00000527920 OXLD1Q5BKU9 147 aa25.99■■□□□ 1.75
SSSCA1-205ENST00000527920 RNF152Q8N8N0 203 aa25.99■■□□□ 1.75
SSSCA1-205ENST00000527920 OR4A4PQ8NGN8 299 aa25.99■■□□□ 1.75
SSSCA1-205ENST00000527920 TOLLIPQ9H0E2 274 aa25.99■■□□□ 1.75
SSSCA1-205ENST00000527920 SSR3Q9UNL2 185 aa25.99■■□□□ 1.75
SSSCA1-205ENST00000527920 PRKDCP78527 4128 aaKnown RBP25.99■■□□□ 1.75
SSSCA1-205ENST00000527920 IGKV1-6A0A0C4DH72 117 aa25.98■■□□□ 1.75
SSSCA1-205ENST00000527920 KIR2DS1Q14954 304 aa25.98■■□□□ 1.75
SSSCA1-205ENST00000527920 NPBQ8NG41 125 aa25.98■■□□□ 1.75
SSSCA1-205ENST00000527920 RBMXL1Q96E39 390 aaKnown RBP25.98■■□□□ 1.75
SSSCA1-205ENST00000527920 CHCHD6Q9BRQ6 235 aa25.98■■□□□ 1.75
SSSCA1-205ENST00000527920 ZNF107Q9UII5 783 aaPredicted RBP25.98■■□□□ 1.75
SSSCA1-205ENST00000527920 NBR2O15453 112 aa25.97■■□□□ 1.75
SSSCA1-205ENST00000527920 HLA-DRB1P01911 266 aa25.97■■□□□ 1.75
SSSCA1-205ENST00000527920 FCGR3AP08637 254 aa25.97■■□□□ 1.75
SSSCA1-205ENST00000527920 CT45A6P0DMU7 189 aa25.97■■□□□ 1.75
SSSCA1-205ENST00000527920 CT45A5P0DMU8 189 aa25.97■■□□□ 1.75
SSSCA1-205ENST00000527920 CT45A7P0DMV0 189 aa25.97■■□□□ 1.75
SSSCA1-205ENST00000527920 MC5RP33032 325 aa25.97■■□□□ 1.75
SSSCA1-205ENST00000527920 CFHR3Q02985 330 aa25.97■■□□□ 1.75
SSSCA1-205ENST00000527920 FOXE3Q13461 319 aa25.97■■□□□ 1.75
SSSCA1-205ENST00000527920 ARL6IP1Q15041 203 aa25.97■■□□□ 1.75
SSSCA1-205ENST00000527920 RPL39P5Q59GN2 51 aa25.97■■□□□ 1.75
SSSCA1-205ENST00000527920 REC114Q7Z4M0 266 aa25.97■■□□□ 1.75
SSSCA1-205ENST00000527920 ABHD14BQ96IU4 210 aa25.97■■□□□ 1.75
SSSCA1-205ENST00000527920 A0A0B4J203 849 aa25.96■■□□□ 1.75
SSSCA1-205ENST00000527920 NDUFA3O95167 84 aa25.96■■□□□ 1.75
SSSCA1-205ENST00000527920 ELANEP08246 267 aa25.96■■□□□ 1.75
SSSCA1-205ENST00000527920 OR5H8P0DN80 308 aa25.96■■□□□ 1.75
SSSCA1-205ENST00000527920 FAM131AQ6UXB0 335 aa25.96■■□□□ 1.75
SSSCA1-205ENST00000527920 OR5AN1Q8NGI8 311 aa25.96■■□□□ 1.75
SSSCA1-205ENST00000527920 RITA1Q96K30 269 aa25.96■■□□□ 1.75
SSSCA1-205ENST00000527920 CABLES2Q9BTV7 478 aa25.96■■□□□ 1.75
SSSCA1-205ENST00000527920 RRP15Q9Y3B9 282 aaKnown RBP25.96■■□□□ 1.75
SSSCA1-205ENST00000527920 FABP7O15540 132 aa25.95■■□□□ 1.74
SSSCA1-205ENST00000527920 IGHG4P01861 327 aa25.95■■□□□ 1.74
SSSCA1-205ENST00000527920 SLC2A2P11168 524 aaPredicted RBP25.95■■□□□ 1.74
SSSCA1-205ENST00000527920 GNB3P16520 340 aa25.95■■□□□ 1.74
SSSCA1-205ENST00000527920 SRSF7Q16629 238 aaKnown RBP eCLIP25.95■■□□□ 1.74
SSSCA1-205ENST00000527920 C5orf64Q2M2E5 130 aa25.95■■□□□ 1.74
SSSCA1-205ENST00000527920 ETV3LQ6ZN32 361 aa25.95■■□□□ 1.74
SSSCA1-205ENST00000527920 RCC1LQ96I51 464 aaKnown RBP25.95■■□□□ 1.74
SSSCA1-205ENST00000527920 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP25.95■■□□□ 1.74
SSSCA1-205ENST00000527920 H0YJW9 148 aa25.94■■□□□ 1.74
SSSCA1-205ENST00000527920 RBBP9O75884 186 aa25.94■■□□□ 1.74
SSSCA1-205ENST00000527920 DUS4LO95620 317 aaKnown RBP25.94■■□□□ 1.74
SSSCA1-205ENST00000527920 VDAC1P21796 283 aa25.94■■□□□ 1.74
SSSCA1-205ENST00000527920 CENPOQ9BU64 300 aa25.94■■□□□ 1.74
SSSCA1-205ENST00000527920 KIAA1456Q9P272 454 aa25.94■■□□□ 1.74
SSSCA1-205ENST00000527920 TGP01266 2768 aa25.94■■□□□ 1.74
SSSCA1-205ENST00000527920 CNTFRP26992 372 aa25.93■■□□□ 1.74
SSSCA1-205ENST00000527920 CXorf66Q5JRM2 361 aaPredicted RBP25.93■■□□□ 1.74
SSSCA1-205ENST00000527920 Q6ZS49 121 aa25.93■■□□□ 1.74
SSSCA1-205ENST00000527920 LINC00482Q8N8I6 264 aa25.93■■□□□ 1.74
SSSCA1-205ENST00000527920 ZNF436-AS1Q8NC38 126 aaPredicted RBP25.93■■□□□ 1.74
SSSCA1-205ENST00000527920 KCTD7Q96MP8 289 aa25.93■■□□□ 1.74
SSSCA1-205ENST00000527920 RNF5Q99942 180 aa25.93■■□□□ 1.74
SSSCA1-205ENST00000527920 RDH8Q9NYR8 311 aa25.93■■□□□ 1.74
SSSCA1-205ENST00000527920 ZNF221Q9UK13 617 aa25.93■■□□□ 1.74
SSSCA1-205ENST00000527920 WASHC3Q9Y3C0 194 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms