RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 UBALD1Q8TB05 177 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 KCNE4Q8WWG9 221 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 RPUSD4Q96CM3 377 aaKnown RBP10.64□□□□□ -0.71
CAPN1-208ENST00000527323 SGCZQ96LD1 299 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 MAP1LC3BQ9GZQ8 125 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 TMEM242Q9NWH2 141 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 KCNS2Q9ULS6 477 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 ZNF705GA8MUZ8 300 aaPredicted RBP10.64□□□□□ -0.71
CAPN1-208ENST00000527323 DNPH1O43598 174 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 IFNA10P01566 189 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 HBG1P69891 147 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 HBG2P69892 147 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 SRYQ05066 204 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 ARL16Q0P5N6 197 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 USF2Q15853 346 aaPredicted RBP10.64□□□□□ -0.71
CAPN1-208ENST00000527323 C20orf204Q6ZNR8 217 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 SSX7Q7RTT5 188 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 MRGPRGQ86SM5 289 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 OR1K1Q8NGR3 316 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 OR4X1Q8NH49 305 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 ANAPC16Q96DE5 110 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 GPR87Q9BY21 358 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 WDR54Q9H977 334 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 RNF150Q9ULK6 438 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 LAMP3Q9UQV4 416 aa10.64□□□□□ -0.71
CAPN1-208ENST00000527323 MRPL33O75394 65 aaKnown RBP10.63□□□□□ -0.71
CAPN1-208ENST00000527323 MLF1P58340 268 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 B3GALT5-AS1P59052 145 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 CD81P60033 236 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 ARF1P84077 181 aaKnown RBP10.63□□□□□ -0.71
CAPN1-208ENST00000527323 TRA2AQ13595 282 aaKnown RBP eCLIP10.63□□□□□ -0.71
CAPN1-208ENST00000527323 NCR3LG1Q68D85 454 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 GGNQ86UU5 652 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 MBD3L1Q8WWY6 194 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 PRDM14Q9GZV8 571 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 RBKSQ9H477 322 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 ICE1Q9Y2F5 2266 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 TRBV24-1A0A075B6N3 115 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 CD55P08174 381 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 ERVS71-1P61550 626 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 TMEM241Q24JQ0 296 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 CEACAM21Q3KPI0 293 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 RIPPLY2Q5TAB7 128 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 OR8G2PQ6IF36 304 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 PCSK4Q6UW60 755 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 ZNF525Q8N782 197 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 SPSB4Q96A44 273 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 OR5B12Q96R08 314 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 FGF23Q9GZV9 251 aaPredicted RBP10.63□□□□□ -0.71
CAPN1-208ENST00000527323 OR14J1Q9UGF5 321 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 PRSS50Q9UI38 385 aa10.63□□□□□ -0.71
CAPN1-208ENST00000527323 WISP2O76076 250 aa10.62□□□□□ -0.71
CAPN1-208ENST00000527323 MMP7P09237 267 aaPredicted RBP10.62□□□□□ -0.71
CAPN1-208ENST00000527323 FOXC1Q12948 553 aa10.62□□□□□ -0.71
CAPN1-208ENST00000527323 SRSF7Q16629 238 aaKnown RBP eCLIP10.62□□□□□ -0.71
CAPN1-208ENST00000527323 C16orf82Q7Z2V1 217 aa10.62□□□□□ -0.71
CAPN1-208ENST00000527323 GTF3AQ92664 365 aaKnown RBP10.62□□□□□ -0.71
CAPN1-208ENST00000527323 OR4C12Q96R67 309 aa10.62□□□□□ -0.71
CAPN1-208ENST00000527323 P2RX4Q99571 388 aa10.62□□□□□ -0.71
CAPN1-208ENST00000527323 CTDSP1Q9GZU7 261 aa10.62□□□□□ -0.71
CAPN1-208ENST00000527323 OR51B6Q9H340 312 aa10.62□□□□□ -0.71
CAPN1-208ENST00000527323 RIMS4Q9H426 269 aaPredicted RBP10.62□□□□□ -0.71
CAPN1-208ENST00000527323 GDF1P27539 372 aa10.62□□□□□ -0.71
CAPN1-208ENST00000527323 ZNF295-AS1Q8N0V1 137 aa10.62□□□□□ -0.71
CAPN1-208ENST00000527323 Q8NFD4 153 aa10.62□□□□□ -0.71
CAPN1-208ENST00000527323 OR5T1Q8NG75 326 aa10.62□□□□□ -0.71
CAPN1-208ENST00000527323 OR10V1Q8NGI7 309 aa10.62□□□□□ -0.71
CAPN1-208ENST00000527323 MRPL30Q8TCC3 161 aaKnown RBP10.62□□□□□ -0.71
CAPN1-208ENST00000527323 OR1A1Q9P1Q5 309 aa10.62□□□□□ -0.71
CAPN1-208ENST00000527323 ACACBO00763 2458 aa10.62□□□□□ -0.71
CAPN1-208ENST00000527323 UBE2L5PA0A1B0GUS4 154 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 IDH3GP51553 393 aaPredicted RBP10.61□□□□□ -0.71
CAPN1-208ENST00000527323 SERF2P84101 59 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 COL10A1Q03692 680 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 TMEM41BQ5BJD5 291 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 ZNF324BQ6AW86 544 aaPredicted RBP10.61□□□□□ -0.71
CAPN1-208ENST00000527323 ZNF66Q6ZN08 573 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 HIPK2Q9H2X6 1198 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 ZNF552Q9H707 407 aaPredicted RBP10.61□□□□□ -0.71
CAPN1-208ENST00000527323 SH2D2AQ9NP31 389 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 NAT8Q9UHE5 227 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 PIGBOS1A0A0B4J2F0 54 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 XKRY2A2RUG3 117 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 PPP5D1E7EU14 171 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 H7BYZ3 331 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 WDR1O75083 606 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 NGFP01138 241 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 CCL11P51671 97 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 LRRC75BQ2VPJ9 315 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 BSXQ3C1V8 233 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 TMEM183AQ8IXX5 376 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 SAXO1Q8IYX7 474 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 ARL6IP6Q8N6S5 226 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 KIAA1324LA8MWY0 1029 aaPredicted RBP10.61□□□□□ -0.71
CAPN1-208ENST00000527323 NDUFB7P17568 137 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 FGF7P21781 194 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 PIP4P1Q86T03 277 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 MYPOPQ86VE0 399 aaPredicted RBP10.61□□□□□ -0.71
CAPN1-208ENST00000527323 TMEM37Q8WXS4 190 aa10.61□□□□□ -0.71
CAPN1-208ENST00000527323 PINX1Q96BK5 328 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms