RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 GYG2O15488 501 aa12.16□□□□□ -0.46
CHMP4A-203ENST00000527154 ZNF780AO75290 641 aaPredicted RBP12.16□□□□□ -0.46
CHMP4A-203ENST00000527154 AADACP22760 399 aa12.16□□□□□ -0.46
CHMP4A-203ENST00000527154 PPP1CCP36873 323 aaKnown RBP12.16□□□□□ -0.46
CHMP4A-203ENST00000527154 TATDN3Q17R31 274 aa12.16□□□□□ -0.46
CHMP4A-203ENST00000527154 DEFB114Q30KQ6 69 aa12.16□□□□□ -0.46
CHMP4A-203ENST00000527154 DNAL1Q4LDG9 190 aa12.16□□□□□ -0.46
CHMP4A-203ENST00000527154 ATAD3CQ5T2N8 411 aa12.16□□□□□ -0.46
CHMP4A-203ENST00000527154 OR52L2PQ8NGH6 319 aa12.16□□□□□ -0.46
CHMP4A-203ENST00000527154 OR4K15Q8NH41 348 aa12.16□□□□□ -0.46
CHMP4A-203ENST00000527154 RFKQ969G6 155 aa12.16□□□□□ -0.46
CHMP4A-203ENST00000527154 GPER1Q99527 375 aa12.16□□□□□ -0.46
CHMP4A-203ENST00000527154 FAM192AQ9GZU8 254 aa12.16□□□□□ -0.46
CHMP4A-203ENST00000527154 PAK1IP1Q9NWT1 392 aaPredicted RBP12.16□□□□□ -0.46
CHMP4A-203ENST00000527154 PEMTQ9UBM1 199 aa12.16□□□□□ -0.46
CHMP4A-203ENST00000527154 POMPQ9Y244 141 aa12.16□□□□□ -0.46
CHMP4A-203ENST00000527154 PKD1P98161 4303 aa12.15□□□□□ -0.46
CHMP4A-203ENST00000527154 A0A1W2PP11 408 aa12.15□□□□□ -0.46
CHMP4A-203ENST00000527154 G3V2T6 193 aa12.15□□□□□ -0.46
CHMP4A-203ENST00000527154 NDUFB8O95169 186 aa12.15□□□□□ -0.46
CHMP4A-203ENST00000527154 CA2P00918 260 aa12.15□□□□□ -0.46
CHMP4A-203ENST00000527154 PSG5Q15238 335 aa12.15□□□□□ -0.46
CHMP4A-203ENST00000527154 PRR18Q8N4B5 295 aa12.15□□□□□ -0.46
CHMP4A-203ENST00000527154 ABHD5Q8WTS1 349 aa12.15□□□□□ -0.46
CHMP4A-203ENST00000527154 C4orf36Q96KX1 117 aa12.15□□□□□ -0.46
CHMP4A-203ENST00000527154 TINAGL1Q9GZM7 467 aaPredicted RBP12.15□□□□□ -0.46
CHMP4A-203ENST00000527154 GABARAPL1Q9H0R8 117 aa12.15□□□□□ -0.46
CHMP4A-203ENST00000527154 SLC22A1O15245 554 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 RBMXL2O75526 392 aaKnown RBP12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 SPDEFO95238 335 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 GLAP06280 429 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 GTF2F2P13984 249 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 MC5RP33032 325 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 POLR2IP36954 125 aaKnown RBP12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 PRR20EP86478 221 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 PRR20CP86479 221 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 PRR20DP86480 221 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 PRR20BP86481 221 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 PRR20AP86496 221 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 SLC25A30Q5SVS4 291 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 C6orf141Q5SZD1 244 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 LYG2Q86SG7 212 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 SYS1Q8N2H4 156 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 NEK7Q8TDX7 302 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 KCTD12Q96CX2 325 aaKnown RBP12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 USMG5Q96IX5 58 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 TMEM68Q96MH6 324 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 PDCD1LG2Q9BQ51 273 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 GGTLC1Q9BX51 225 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 TAS2R4Q9NYW5 299 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 ENOPH1Q9UHY7 261 aa12.14□□□□□ -0.47
CHMP4A-203ENST00000527154 DAPL1A0PJW8 107 aa12.13□□□□□ -0.47
CHMP4A-203ENST00000527154 MCRIP1C9JLW8 97 aa12.13□□□□□ -0.47
CHMP4A-203ENST00000527154 J3QLW9 94 aa12.13□□□□□ -0.47
CHMP4A-203ENST00000527154 ZNF19P17023 458 aa12.13□□□□□ -0.47
CHMP4A-203ENST00000527154 SERPINA2P20848 420 aa12.13□□□□□ -0.47
CHMP4A-203ENST00000527154 KIR2DS2P43631 304 aa12.13□□□□□ -0.47
CHMP4A-203ENST00000527154 PLGLAQ15195 96 aa12.13□□□□□ -0.47
CHMP4A-203ENST00000527154 RPEL1Q2QD12 228 aa12.13□□□□□ -0.47
CHMP4A-203ENST00000527154 DMKNQ6E0U4 476 aaPredicted RBP12.13□□□□□ -0.47
CHMP4A-203ENST00000527154 C5orf24Q7Z6I8 188 aa12.13□□□□□ -0.47
CHMP4A-203ENST00000527154 ZDHHC13Q8IUH4 622 aa12.13□□□□□ -0.47
CHMP4A-203ENST00000527154 ACBD7Q8N6N7 88 aa12.13□□□□□ -0.47
CHMP4A-203ENST00000527154 BVESQ8NE79 360 aa12.13□□□□□ -0.47
CHMP4A-203ENST00000527154 MRPS24Q96EL2 167 aaKnown RBP12.13□□□□□ -0.47
CHMP4A-203ENST00000527154 AGMATQ9BSE5 352 aa12.13□□□□□ -0.47
CHMP4A-203ENST00000527154 GABARAPL3Q9BY60 117 aa12.13□□□□□ -0.47
CHMP4A-203ENST00000527154 TMEM138Q9NPI0 162 aa12.13□□□□□ -0.47
CHMP4A-203ENST00000527154 PIPOXQ9P0Z9 390 aa12.13□□□□□ -0.47
CHMP4A-203ENST00000527154 METTL1Q9UBP6 276 aaKnown RBP12.13□□□□□ -0.47
CHMP4A-203ENST00000527154 WASHC3Q9Y3C0 194 aa12.13□□□□□ -0.47
CHMP4A-203ENST00000527154 BMPR1BO00238 502 aa12.12□□□□□ -0.47
CHMP4A-203ENST00000527154 BMI1P35226 326 aa12.12□□□□□ -0.47
CHMP4A-203ENST00000527154 ZNF93P35789 620 aaPredicted RBP12.12□□□□□ -0.47
CHMP4A-203ENST00000527154 FXYD3Q14802 87 aa12.12□□□□□ -0.47
CHMP4A-203ENST00000527154 ATP6AP1Q15904 470 aa12.12□□□□□ -0.47
CHMP4A-203ENST00000527154 RAB12Q6IQ22 244 aa12.12□□□□□ -0.47
CHMP4A-203ENST00000527154 Q6ZWC4 215 aa12.12□□□□□ -0.47
CHMP4A-203ENST00000527154 OR2AK2Q8NG84 335 aa12.12□□□□□ -0.47
CHMP4A-203ENST00000527154 OR5AK2Q8NH90 309 aa12.12□□□□□ -0.47
CHMP4A-203ENST00000527154 SNAPC3Q92966 411 aa12.12□□□□□ -0.47
CHMP4A-203ENST00000527154 CYYR1Q96J86 154 aa12.12□□□□□ -0.47
CHMP4A-203ENST00000527154 OR14A2Q96R54 314 aa12.12□□□□□ -0.47
CHMP4A-203ENST00000527154 CIB1Q99828 191 aa12.12□□□□□ -0.47
CHMP4A-203ENST00000527154 ING4Q9UNL4 249 aa12.12□□□□□ -0.47
CHMP4A-203ENST00000527154 EXOGQ9Y2C4 368 aaKnown RBP12.12□□□□□ -0.47
CHMP4A-203ENST00000527154 LOC102724200A0A096LPH7 203 aaPredicted RBP12.11□□□□□ -0.47
CHMP4A-203ENST00000527154 FAM90A7PA6NKC0 464 aa12.11□□□□□ -0.47
CHMP4A-203ENST00000527154 FAM90A23PA8MXZ1 464 aa12.11□□□□□ -0.47
CHMP4A-203ENST00000527154 E9PI62 339 aa12.11□□□□□ -0.47
CHMP4A-203ENST00000527154 ITGB1BP1O14713 200 aa12.11□□□□□ -0.47
CHMP4A-203ENST00000527154 RAB29O14966 203 aa12.11□□□□□ -0.47
CHMP4A-203ENST00000527154 PROP1O75360 226 aa12.11□□□□□ -0.47
CHMP4A-203ENST00000527154 MRPL28Q13084 256 aaKnown RBP12.11□□□□□ -0.47
CHMP4A-203ENST00000527154 SIGIRRQ6IA17 410 aa12.11□□□□□ -0.47
CHMP4A-203ENST00000527154 OR5T1Q8NG75 326 aa12.11□□□□□ -0.47
CHMP4A-203ENST00000527154 MRPL30Q8TCC3 161 aaKnown RBP12.11□□□□□ -0.47
CHMP4A-203ENST00000527154 PHLDA1Q8WV24 401 aaPredicted RBP12.11□□□□□ -0.47
CHMP4A-203ENST00000527154 CLCC1Q96S66 551 aa12.11□□□□□ -0.47
CHMP4A-203ENST00000527154 SULT4A1Q9BR01 284 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms