RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 PRAMEF6Q5VXH4 476 aa17.09■□□□□ 0.33
SMIM3-201ENST00000526627 ZBTB34Q8NCN2 500 aa17.09■□□□□ 0.33
SMIM3-201ENST00000526627 WDR61Q9GZS3 305 aaKnown RBP17.09■□□□□ 0.33
SMIM3-201ENST00000526627 CXXC4Q9H2H0 198 aa17.09■□□□□ 0.33
SMIM3-201ENST00000526627 A0A087WWC5 75 aa17.09■□□□□ 0.33
SMIM3-201ENST00000526627 WT1P19544 449 aaPredicted RBP17.09■□□□□ 0.33
SMIM3-201ENST00000526627 TAGLN2P37802 199 aaKnown RBP17.09■□□□□ 0.33
SMIM3-201ENST00000526627 HBG1P69891 147 aa17.09■□□□□ 0.33
SMIM3-201ENST00000526627 HBG2P69892 147 aa17.09■□□□□ 0.33
SMIM3-201ENST00000526627 WDR82Q6UXN9 313 aa17.09■□□□□ 0.33
SMIM3-201ENST00000526627 TMEM14EPQ6UXP3 125 aa17.09■□□□□ 0.33
SMIM3-201ENST00000526627 OR10G4Q8NGN3 311 aa17.09■□□□□ 0.33
SMIM3-201ENST00000526627 PARD6GQ9BYG4 376 aaPredicted RBP17.09■□□□□ 0.33
SMIM3-201ENST00000526627 RBKSQ9H477 322 aa17.09■□□□□ 0.33
SMIM3-201ENST00000526627 ZNF665Q9H7R5 613 aa17.09■□□□□ 0.33
SMIM3-201ENST00000526627 GNG13Q9P2W3 67 aa17.09■□□□□ 0.33
SMIM3-201ENST00000526627 METRNQ9UJH8 293 aa17.09■□□□□ 0.33
SMIM3-201ENST00000526627 OOEPA6NGQ2 149 aa17.08■□□□□ 0.33
SMIM3-201ENST00000526627 S100A6P06703 90 aa17.08■□□□□ 0.33
SMIM3-201ENST00000526627 OR2B8PP59922 312 aa17.08■□□□□ 0.33
SMIM3-201ENST00000526627 TNFRSF9Q07011 255 aa17.08■□□□□ 0.33
SMIM3-201ENST00000526627 IGFL2Q6UWQ7 119 aa17.08■□□□□ 0.33
SMIM3-201ENST00000526627 RBMS3Q6XE24 437 aaKnown RBP17.08■□□□□ 0.33
SMIM3-201ENST00000526627 PRR7Q8TB68 274 aa17.08■□□□□ 0.33
SMIM3-201ENST00000526627 RCC1LQ96I51 464 aaKnown RBP17.08■□□□□ 0.33
SMIM3-201ENST00000526627 METTL1Q9UBP6 276 aaKnown RBP17.08■□□□□ 0.33
SMIM3-201ENST00000526627 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.08■□□□□ 0.32
SMIM3-201ENST00000526627 AQP7O14520 342 aa17.08■□□□□ 0.32
SMIM3-201ENST00000526627 PTBP3O95758 552 aaKnown RBP17.08■□□□□ 0.32
SMIM3-201ENST00000526627 CD82P27701 267 aa17.08■□□□□ 0.32
SMIM3-201ENST00000526627 IL2RGP31785 369 aa17.08■□□□□ 0.32
SMIM3-201ENST00000526627 FOXF2Q12947 444 aa17.08■□□□□ 0.32
SMIM3-201ENST00000526627 FAM90A2PQ658T7 463 aa17.08■□□□□ 0.32
SMIM3-201ENST00000526627 C1QL4Q86Z23 238 aa17.08■□□□□ 0.32
SMIM3-201ENST00000526627 ZNF808Q8N4W9 903 aaPredicted RBP17.08■□□□□ 0.32
SMIM3-201ENST00000526627 C1orf162Q8NEQ5 155 aaPredicted RBP17.08■□□□□ 0.32
SMIM3-201ENST00000526627 TVP23CQ96ET8 276 aa17.08■□□□□ 0.32
SMIM3-201ENST00000526627 HSPB7Q9UBY9 170 aa17.08■□□□□ 0.32
SMIM3-201ENST00000526627 FZR1Q9UM11 496 aa17.08■□□□□ 0.32
SMIM3-201ENST00000526627 CECR9P0C854 216 aa17.07■□□□□ 0.32
SMIM3-201ENST00000526627 G6PCP35575 357 aa17.07■□□□□ 0.32
SMIM3-201ENST00000526627 OR2B11Q5JQS5 317 aa17.07■□□□□ 0.32
SMIM3-201ENST00000526627 ZNF787Q6DD87 383 aa17.07■□□□□ 0.32
SMIM3-201ENST00000526627 LCN15Q6UWW0 184 aa17.07■□□□□ 0.32
SMIM3-201ENST00000526627 PIP4P1Q86T03 277 aa17.07■□□□□ 0.32
SMIM3-201ENST00000526627 LILRB2Q8N423 598 aa17.07■□□□□ 0.32
SMIM3-201ENST00000526627 CISD1Q9NZ45 108 aaKnown RBP17.07■□□□□ 0.32
SMIM3-201ENST00000526627 BDP1A6H8Y1 2624 aa17.07■□□□□ 0.32
SMIM3-201ENST00000526627 KITLGP21583 273 aa17.07■□□□□ 0.32
SMIM3-201ENST00000526627 SERF2P84101 59 aa17.07■□□□□ 0.32
SMIM3-201ENST00000526627 FABP9Q0Z7S8 132 aa17.07■□□□□ 0.32
SMIM3-201ENST00000526627 ACSF3Q4G176 576 aaPredicted RBP17.07■□□□□ 0.32
SMIM3-201ENST00000526627 SLC35E3Q7Z769 313 aa17.07■□□□□ 0.32
SMIM3-201ENST00000526627 MRGPRDQ8TDS7 321 aa17.07■□□□□ 0.32
SMIM3-201ENST00000526627 C17orf98A8MV24 154 aa17.06■□□□□ 0.32
SMIM3-201ENST00000526627 S1PR2O95136 353 aa17.06■□□□□ 0.32
SMIM3-201ENST00000526627 KRASP01116 189 aa17.06■□□□□ 0.32
SMIM3-201ENST00000526627 BCL2P10415 239 aa17.06■□□□□ 0.32
SMIM3-201ENST00000526627 FGF8P55075 233 aaPredicted RBP17.06■□□□□ 0.32
SMIM3-201ENST00000526627 ZNF816Q0VGE8 651 aaPredicted RBP17.06■□□□□ 0.32
SMIM3-201ENST00000526627 NIPSNAP3BQ9BS92 247 aa17.06■□□□□ 0.32
SMIM3-201ENST00000526627 DIDO1Q9BTC0 2240 aaKnown RBP17.06■□□□□ 0.32
SMIM3-201ENST00000526627 MSL2Q9HCI7 577 aa17.06■□□□□ 0.32
SMIM3-201ENST00000526627 UFSP2Q9NUQ7 469 aa17.06■□□□□ 0.32
SMIM3-201ENST00000526627 TIMM8AO60220 97 aaPredicted RBP17.05■□□□□ 0.32
SMIM3-201ENST00000526627 SLC38A11Q08AI6 406 aa17.05■□□□□ 0.32
SMIM3-201ENST00000526627 ZNF343Q6P1L6 599 aa17.05■□□□□ 0.32
SMIM3-201ENST00000526627 TAF15Q92804 592 aaKnown RBP eCLIP17.05■□□□□ 0.32
SMIM3-201ENST00000526627 SEBOXQ9HB31 216 aaPredicted RBP17.05■□□□□ 0.32
SMIM3-201ENST00000526627 ODAMA1E959 279 aa17.05■□□□□ 0.32
SMIM3-201ENST00000526627 IGLV1-44P01699 117 aa17.05■□□□□ 0.32
SMIM3-201ENST00000526627 PLA2G5P39877 138 aa17.05■□□□□ 0.32
SMIM3-201ENST00000526627 GLIPR1P48060 266 aa17.05■□□□□ 0.32
SMIM3-201ENST00000526627 COL10A1Q03692 680 aa17.05■□□□□ 0.32
SMIM3-201ENST00000526627 ELOBQ15370 118 aa17.05■□□□□ 0.32
SMIM3-201ENST00000526627 ASCL3Q9NQ33 180 aa17.05■□□□□ 0.32
SMIM3-201ENST00000526627 USF3Q68DE3 2245 aa17.04■□□□□ 0.32
SMIM3-201ENST00000526627 UBE2L5PA0A1B0GUS4 154 aa17.04■□□□□ 0.32
SMIM3-201ENST00000526627 ZFP92A6NM28 416 aa17.04■□□□□ 0.32
SMIM3-201ENST00000526627 PRR33A8MZF0 331 aa17.04■□□□□ 0.32
SMIM3-201ENST00000526627 CLDN1O95832 211 aa17.04■□□□□ 0.32
SMIM3-201ENST00000526627 HOXC12P31275 282 aa17.04■□□□□ 0.32
SMIM3-201ENST00000526627 SSTR5P35346 364 aa17.04■□□□□ 0.32
SMIM3-201ENST00000526627 GABRA2P47869 451 aa17.04■□□□□ 0.32
SMIM3-201ENST00000526627 FABP6P51161 128 aa17.04■□□□□ 0.32
SMIM3-201ENST00000526627 TMEM41BQ5BJD5 291 aa17.04■□□□□ 0.32
SMIM3-201ENST00000526627 TPRX1Q8N7U7 411 aa17.04■□□□□ 0.32
SMIM3-201ENST00000526627 OR13A1Q8NGR1 328 aa17.04■□□□□ 0.32
SMIM3-201ENST00000526627 Q8WTZ3 238 aa17.04■□□□□ 0.32
SMIM3-201ENST00000526627 CA5BP1Q8WTZ4 195 aa17.04■□□□□ 0.32
SMIM3-201ENST00000526627 CHD3Q12873 2000 aaKnown RBP17.04■□□□□ 0.32
SMIM3-201ENST00000526627 LOC400499M0QZD8 3231 aa17.04■□□□□ 0.32
SMIM3-201ENST00000526627 LRRC30A6NM36 301 aa17.04■□□□□ 0.32
SMIM3-201ENST00000526627 CXCL1P09341 107 aa17.04■□□□□ 0.32
SMIM3-201ENST00000526627 OR8G2PQ6IF36 304 aa17.04■□□□□ 0.32
SMIM3-201ENST00000526627 BTNL3Q6UXE8 466 aa17.04■□□□□ 0.32
SMIM3-201ENST00000526627 CACNA1GO43497 2377 aa17.03■□□□□ 0.32
SMIM3-201ENST00000526627 PMS2P5A8MQ11 134 aa17.03■□□□□ 0.32
SMIM3-201ENST00000526627 IGKV1D-33P01593 117 aa17.03■□□□□ 0.32
SMIM3-201ENST00000526627 IGKV1-33P01594 117 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms