RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 ZNF99A8MXY4 864 aaPredicted RBP3.11□□□□□ -1.91
COPB1-204ENST00000526191 CENPBD1B2RD01 187 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 ZNF701M0R085 212 aaPredicted RBP3.11□□□□□ -1.91
COPB1-204ENST00000526191 AIM2O14862 343 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 DENRO43583 198 aaKnown RBP3.11□□□□□ -1.91
COPB1-204ENST00000526191 SNAI2O43623 268 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 EIF1BO60739 113 aaKnown RBP3.11□□□□□ -1.91
COPB1-204ENST00000526191 SCGNO76038 276 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 RAB3DO95716 219 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 MBP02144 154 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 LINC00032P0C843 101 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 ZNF43P17038 809 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 RAB4AP20338 218 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 M6PRP20645 277 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 CXCR1P25024 350 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 GTF2E2P29084 291 aaKnown RBP3.11□□□□□ -1.91
COPB1-204ENST00000526191 DDOSTP39656 456 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 CRATP43155 626 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 GLP1RP43220 463 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 SERPINB9P50453 376 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 BCAP31P51572 246 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 CLDN8P56748 225 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 RPS23P62266 143 aaKnown RBP3.11□□□□□ -1.91
COPB1-204ENST00000526191 RPL38P63173 70 aaKnown RBP3.11□□□□□ -1.91
COPB1-204ENST00000526191 TNFAIP6P98066 277 aaPredicted RBP3.11□□□□□ -1.91
COPB1-204ENST00000526191 HOXC5Q00444 222 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 BST1Q10588 318 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 SLAQ13239 276 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 SPANXN2Q5MJ10 180 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 ZNF678Q5SXM1 525 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 TTC33Q6PID6 262 aaPredicted RBP3.11□□□□□ -1.91
COPB1-204ENST00000526191 ZCCHC23Q6ZST2 131 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 UTS2BQ765I0 119 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 EIF3MQ7L2H7 374 aaKnown RBP3.11□□□□□ -1.91
COPB1-204ENST00000526191 CLECL1Q8IZS7 167 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 TMEM61Q8N0U2 210 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 OR5AS1Q8N127 324 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 SLC35F6Q8N357 371 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 KRTCAP2Q8N6L1 136 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 SLC30A7Q8NEW0 376 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 OR2Z1Q8NG97 314 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 OR51G1Q8NGK1 321 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 NDNFQ8TB73 568 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 SLC25A40Q8TBP6 338 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 MAGEE2Q8TD90 523 aaPredicted RBP3.11□□□□□ -1.91
COPB1-204ENST00000526191 C11orf40Q8WZ69 217 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 UFD1Q92890 307 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 ITCHQ96J02 903 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 SLC35G5Q96KT7 338 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 STACQ99469 402 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 B9D2Q9BPU9 175 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 RTBDNQ9BSG5 229 aaPredicted RBP3.11□□□□□ -1.91
COPB1-204ENST00000526191 C1orf50Q9BV19 199 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 OR51I1Q9H343 314 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 RGCCQ9H4X1 137 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 RNF167Q9H6Y7 350 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 FN3KRPQ9HA64 309 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 CCL28Q9NRJ3 127 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 TMEM106BQ9NUM4 274 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 PEF1Q9UBV8 284 aaKnown RBP3.11□□□□□ -1.91
COPB1-204ENST00000526191 TRAPPC4Q9Y296 219 aa3.11□□□□□ -1.91
COPB1-204ENST00000526191 HUWE1Q7Z6Z7 4374 aaKnown RBP3.1□□□□□ -1.91
COPB1-204ENST00000526191 SPRR5A0A1B0GTR4 108 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 LRRN3E7EW58 273 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 C3orf84H3BNL1 204 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 TIMM8AO60220 97 aaPredicted RBP3.1□□□□□ -1.91
COPB1-204ENST00000526191 RPP14O95059 124 aaKnown RBP3.1□□□□□ -1.91
COPB1-204ENST00000526191 AHSA1O95433 338 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 CPSF4O95639 269 aaKnown RBP3.1□□□□□ -1.91
COPB1-204ENST00000526191 OPN1SWP03999 348 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 RBP1P09455 135 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 GIPP09681 153 aaPredicted RBP3.1□□□□□ -1.91
COPB1-204ENST00000526191 RBMY1A1P0DJD3 496 aaKnown RBP3.1□□□□□ -1.91
COPB1-204ENST00000526191 ZNF250P15622 560 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 CRISP2P16562 243 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 MSR1P21757 451 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 LCN1P31025 176 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 ERFP50548 548 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 GPM6AP51674 278 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 RAB4BP61018 213 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 ARF6P62330 175 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 C2orf54Q08AI8 447 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 FUT5Q11128 374 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 KLRD1Q13241 179 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 MAB21L1Q13394 359 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 PMS2P3Q13401 168 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 ZNF141Q15928 474 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 DUSP7Q16829 419 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 C1orf140Q5VVS0 124 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 LRRN1Q6UXK5 716 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 FAM122BQ7Z309 247 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 C6orf120Q7Z4R8 191 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 LRRC28Q86X40 367 aaPredicted RBP3.1□□□□□ -1.91
COPB1-204ENST00000526191 LRRC8AQ8IWT6 810 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 ZNF101Q8IZC7 436 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 SPICQ8N5J4 248 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 OR4S1Q8NGB4 309 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 OR10Z1Q8NGY1 313 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 OR6N1Q8NGY5 312 aa3.1□□□□□ -1.91
COPB1-204ENST00000526191 KIR2DL5BQ8NHK3 375 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms