RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 NDUFA2O43678 99 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 SAP30O75446 220 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 GAS8-AS1O95177 125 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 IGKV1D-12P01611 117 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 SFTPBP07988 381 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 PSG2P11465 335 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 GTF2F2P13984 249 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 MUC1P15941 1255 aaPredicted RBP3.65□□□□□ -1.83
USP48-211ENST00000526044 MGMTP16455 207 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 PRKACAP17612 351 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 PRDX2P32119 198 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 RBMXP38159 391 aaKnown RBP3.65□□□□□ -1.83
USP48-211ENST00000526044 GPR6P46095 362 aaPredicted RBP3.65□□□□□ -1.83
USP48-211ENST00000526044 GABRA2P47869 451 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 ATP5IP56385 69 aaPredicted RBP3.65□□□□□ -1.83
USP48-211ENST00000526044 FGF12P61328 243 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 ERVK11-1P61568 191 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 QRFPP83859 136 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 DYNC1I2Q13409 638 aaKnown RBP3.65□□□□□ -1.83
USP48-211ENST00000526044 COTL1Q14019 142 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 KCNJ8Q15842 424 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 MRGPRG-AS1Q2M3A8 158 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 DEFB113Q30KQ7 82 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 CNPY1Q3B7I2 92 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 FAM201AQ5SY85 155 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 ELP2Q6IA86 826 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 OR10K2Q6IF99 312 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 ACP7Q6ZNF0 438 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 OR2W3Q7Z3T1 314 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 LRRC28Q86X40 367 aaPredicted RBP3.65□□□□□ -1.83
USP48-211ENST00000526044 TGIF2LYQ8IUE0 185 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 LRRC75A-AS1Q8N1F1 130 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 OSR2Q8N2R0 312 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 C19orf18Q8NEA5 215 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 OR5T2Q8NGG2 359 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 OR5H6Q8NGV6 325 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 OR10K1Q8NGX5 313 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 MCFD2Q8NI22 146 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 EMG1Q92979 244 aaKnown RBP3.65□□□□□ -1.83
USP48-211ENST00000526044 PTX4Q96A99 478 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 S100A16Q96FQ6 103 aaKnown RBP3.65□□□□□ -1.83
USP48-211ENST00000526044 TIMD4Q96H15 378 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 CITED1Q99966 193 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 NRIP2Q9BQI9 281 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 DCUN1D5Q9BTE7 237 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 URM1Q9BTM9 101 aaKnown RBP3.65□□□□□ -1.83
USP48-211ENST00000526044 BARHL1Q9BZE3 327 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 SELENOIQ9C0D9 397 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 ATG5Q9H1Y0 275 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 WDR13Q9H1Z4 485 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 BANF2Q9H503 90 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 TMEM231Q9H6L2 316 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 TMEM165Q9HC07 324 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 HMG20AQ9NP66 347 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 DIABLOQ9NR28 239 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 RBFOX1Q9NWB1 397 aaKnown RBP3.65□□□□□ -1.83
USP48-211ENST00000526044 CCDC59Q9P031 241 aaKnown RBP3.65□□□□□ -1.83
USP48-211ENST00000526044 ONECUT1Q9UBC0 465 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 COMMD3Q9UBI1 195 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 OR5V1Q9UGF6 321 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 SPATA2Q9UM82 520 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 ETV7Q9Y603 341 aa3.65□□□□□ -1.83
USP48-211ENST00000526044 PKDREJQ9NTG1 2253 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 DOPEY2Q9Y3R5 2298 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 ADGRG4Q8IZF6 3080 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 CACNA1DQ01668 2161 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 TEX13DA0A0J9YY54 714 aaPredicted RBP3.64□□□□□ -1.83
USP48-211ENST00000526044 ISPDA4D126 451 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 RFPL4AA6NLU0 287 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 OR2AT4A6NND4 320 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 FAM25AB3EWG3 89 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 FAM25CB3EWG5 89 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 FAM25GB3EWG6 89 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 MCRIP1C9JLW8 97 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 RFPL4AL1F8VTS6 287 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 RGS5O15539 181 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 HPGDSO60760 199 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 PRAF2O60831 178 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 RP2O75695 350 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 CLPXO76031 633 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 FSTL3O95633 263 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 APOA1P02647 267 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 GYPAP02724 150 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 CSF3P09919 207 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 SPP1P10451 314 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 GABRR1P24046 479 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 GIFP27352 417 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 CD80P33681 288 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 S100A5P33763 92 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 MDH2P40926 338 aaKnown RBP3.64□□□□□ -1.83
USP48-211ENST00000526044 HTR2BP41595 481 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 VEGFCP49767 419 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 BTG1P62324 171 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 RPS27AP62979 156 aaKnown RBP3.64□□□□□ -1.83
USP48-211ENST00000526044 ZNF146Q15072 292 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 TAF9Q16594 264 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 CLEC12BQ2HXU8 276 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 SMIM21Q3B7S5 101 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 ANKRD55Q3KP44 614 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 PIGYQ3MUY2 71 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms