RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 PDZD11Q5EBL8 140 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 ACTL10Q5JWF8 245 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 VAX1Q5SQQ9 334 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 FAM162BQ5T6X4 162 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 OR4A47Q6IF82 309 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 LEG1Q6P5S2 330 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 TEX38Q6PEX7 206 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 STAC2Q6ZMT1 411 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 SLC35F2Q8IXU6 374 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 Q8N1X5 172 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 FAM89BQ8N5H3 189 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 CSNK1A1LQ8N752 337 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 OR4K1Q8NGD4 311 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 OR52L2PQ8NGH6 319 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 OR4X1Q8NH49 305 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 IL17DQ8TAD2 202 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 LINC01560Q8TB33 94 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 FNDC9Q8TBE3 224 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 ABHD3Q8WU67 409 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 SKA2Q8WVK7 121 aaPredicted RBP4.29□□□□□ -1.72
CD44-218ENST00000525469 LIPHQ8WWY8 451 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 BCL2L2Q92843 193 aaPredicted RBP4.29□□□□□ -1.72
CD44-218ENST00000525469 FGGYQ96C11 551 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 EID2BQ96D98 161 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 WDR34Q96EX3 536 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 SFRP2Q96HF1 295 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 SEC22AQ96IW7 307 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 SLC35G5Q96KT7 338 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 TMEM56Q96MV1 263 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 AMDHD1Q96NU7 426 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 GPHA2Q96T91 129 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 ARHGDIGQ99819 225 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 C20orf24Q9BUV8 137 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 RNF126Q9BV68 326 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 ELOVL1Q9BW60 279 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 NMNAT2Q9BZQ4 307 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 DEFB127Q9H1M4 99 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 ISG20L2Q9H9L3 353 aaKnown RBP4.29□□□□□ -1.72
CD44-218ENST00000525469 BPIFA1Q9NP55 256 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 HINT3Q9NQE9 182 aaKnown RBP4.29□□□□□ -1.72
CD44-218ENST00000525469 FLRT3Q9NZU0 649 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 PEF1Q9UBV8 284 aaKnown RBP4.29□□□□□ -1.72
CD44-218ENST00000525469 C19orf25Q9UFG5 118 aaPredicted RBP4.29□□□□□ -1.72
CD44-218ENST00000525469 KLF13Q9Y2Y9 288 aaPredicted RBP4.29□□□□□ -1.72
CD44-218ENST00000525469 OR51B2Q9Y5P1 312 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 ARL5AQ9Y689 179 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 TMEM56-RWDD3S4R434 201 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 SPACA6W5XKT8 324 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 NINQ8N4C6 2090 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 MED12Q93074 2177 aa4.29□□□□□ -1.72
CD44-218ENST00000525469 NOTCH1P46531 2555 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 TRAV8-7A0A075B6U6 113 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 LOC102723996A0A087X1L8 192 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 TRBV5-5A0A0J9YX44 114 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 A0A1W2PR48 441 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 OR11H12B2RN74 326 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 H7BYZ3 331 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 SLC17A3O00476 420 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 HSD17B6O14756 317 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 AGPAT2O15120 278 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 RBFOX2O43251 390 aaKnown RBP eCLIP4.28□□□□□ -1.72
CD44-218ENST00000525469 CD5LO43866 347 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 FCMRO60667 390 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 CA11O75493 328 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 DEDDO75618 318 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 NEURL1O76050 574 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 OR6A2O95222 327 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 HRASP01112 189 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 CATP04040 527 aaKnown RBP4.28□□□□□ -1.72
CD44-218ENST00000525469 CXCL1P09341 107 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 STAG3L2P0CL84 134 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 PGA4P0DJD7 388 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 PGA5P0DJD9 388 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 OR13C7P0DN81 318 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 TNFRSF1BP20333 461 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 S100GP29377 79 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 APLNRP35414 380 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 ARL3P36405 182 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 RBMXP38159 391 aaKnown RBP4.28□□□□□ -1.72
CD44-218ENST00000525469 COMPP49747 757 aaPredicted RBP4.28□□□□□ -1.72
CD44-218ENST00000525469 PIGPP57054 158 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 TAS2R46P59540 309 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 PLGLB1Q02325 96 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 ZNF117Q03924 483 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 BAXQ07812 192 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 PPP1R1AQ13522 171 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 FHL2Q14192 279 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 GNMTQ14749 295 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 KIR2DS3Q14952 304 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 ACKR1Q16570 336 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 C5orf64Q2M2E5 130 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 MPV17LQ2QL34 196 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 SNAI3Q3KNW1 292 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 RPL7L1Q6DKI1 246 aaKnown RBP4.28□□□□□ -1.72
CD44-218ENST00000525469 HIST2H2BDQ6DRA6 164 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 C19orf35Q6ZS72 473 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 DPY19L4Q7Z388 723 aa4.28□□□□□ -1.72
CD44-218ENST00000525469 CPEB2Q7Z5Q1 589 aaKnown RBP4.28□□□□□ -1.72
CD44-218ENST00000525469 BCDIN3DQ7Z5W3 292 aaKnown RBP4.28□□□□□ -1.72
CD44-218ENST00000525469 CENPVQ7Z7K6 275 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms