RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 BCL7BQ9BQE9 202 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 ZNF251Q9BRH9 671 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 CABLES2Q9BTV7 478 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 TINAGL1Q9GZM7 467 aaPredicted RBP3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 DPAGT1Q9H3H5 408 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 PRDM13Q9H4Q3 707 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 CCL28Q9NRJ3 127 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 EHFQ9NZC4 300 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 C1RLQ9NZP8 487 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 ANXA10Q9UJ72 324 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 VPREB3Q9UKI3 123 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 AMMECR1Q9Y4X0 333 aaPredicted RBP3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 MINOS1-NBL1R4GNA1 71 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 HIVEP2P31629 2446 aa3.69□□□□□ -1.82
CHMP4A-202ENST00000524955 A0A0A6YYH2 397 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 FABP12A6NFH5 140 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 A6NHS1 94 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 A6NJ64 397 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 LINC01548A6NM66 108 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 NCBP2LA6PVI3 153 aaKnown RBP3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 H7C2Y5 167 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 HAX1O00165 279 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 TUSC2O75896 110 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 RGS11O94810 467 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 CD3DP04234 171 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 CRYBA1P05813 215 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 LPLP06858 475 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 RNASE1P07998 156 aaKnown RBP3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 CT45A6P0DMU7 189 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 CT45A5P0DMU8 189 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 CT45A7P0DMV0 189 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 OR5H8P0DN80 308 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 RPA2P15927 270 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 TMEM11P17152 192 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 PI3P19957 117 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 IL3RAP26951 378 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 FCGR2CP31995 323 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 HRH1P35367 487 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 GPR12P47775 334 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 F2RL1P55085 397 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 RPL30P62888 115 aaKnown RBP3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 TAGLNQ01995 201 aaKnown RBP3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 ARL6IP1Q15041 203 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 CDK10Q15131 360 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 ABCA11PQ4W5N1 156 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 PYDC2Q56P42 97 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 STEAP3Q658P3 488 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 DHRS7BQ6IAN0 325 aaPredicted RBP3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 Q6ZSV7 163 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 C11orf44Q8N8P7 122 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 ZNF383Q8NA42 475 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 OR5AP2Q8NGF4 316 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 OR5H2Q8NGV7 314 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 SECTM1Q8WVN6 248 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 FCAMRQ8WWV6 532 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 EAF1Q96JC9 268 aaPredicted RBP3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 JMJD8Q96S16 334 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 CLCC1Q96S66 551 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 NABP2Q9BQ15 211 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 AGMATQ9BSE5 352 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 ZNF2Q9BSG1 426 aaPredicted RBP3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 SLC25A33Q9BSK2 321 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 NXF2Q9GZY0 626 aaKnown RBP3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 RAB9BQ9NP90 201 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 NECAP2Q9NVZ3 263 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 SDHAF2Q9NX18 166 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 LINC00527Q9UJ94 153 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 ZNF221Q9UK13 617 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 ADAM30Q9UKF2 790 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 MGAT4AQ9UM21 535 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 TCF19Q9Y242 345 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 V9GYH0 126 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 FBN1P35555 2871 aaKnown RBP3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 CUBNO60494 3623 aa3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 SONP18583 2426 aaKnown RBP3.68□□□□□ -1.82
CHMP4A-202ENST00000524955 SVEP1Q4LDE5 3571 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 A0A0A6YYJ9 748 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 LINC00473A8K010 186 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 H0YJW9 148 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 ZNF701M0R085 212 aaPredicted RBP3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 RAB29O14966 203 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 TMEM127O75204 238 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 RBBP9O75884 186 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 PPYP01298 95 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 IGLV2-14P01704 120 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 IGKV1-16P04430 117 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 AMY1AP04745 511 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 AMY2AP04746 511 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 FAM106CPP0CH98 169 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 NAT1P18440 290 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 BRS3P32247 399 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 S100A5P33763 92 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 RCVRNP35243 200 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 CBX5P45973 191 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 RAB7AP51149 207 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 LUMP51884 338 aaPredicted RBP3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 PPP5CP53041 499 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 RAG2P55895 527 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 KRTAP10-3P60369 221 aa3.67□□□□□ -1.82
CHMP4A-202ENST00000524955 TSPAN5P62079 268 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms