RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 RAP2AP10114 183 aa12.94□□□□□ -0.34
PVT1-220ENST00000524165 LGALS7P47929 136 aa12.94□□□□□ -0.34
PVT1-220ENST00000524165 CCR9P51686 369 aa12.94□□□□□ -0.34
PVT1-220ENST00000524165 NANOS3P60323 173 aaKnown RBP12.94□□□□□ -0.34
PVT1-220ENST00000524165 GNMTQ14749 295 aa12.94□□□□□ -0.34
PVT1-220ENST00000524165 PTGES3Q15185 160 aaKnown RBP12.94□□□□□ -0.34
PVT1-220ENST00000524165 HS3ST5Q8IZT8 346 aa12.94□□□□□ -0.34
PVT1-220ENST00000524165 TMEM61Q8N0U2 210 aa12.94□□□□□ -0.34
PVT1-220ENST00000524165 KIR2DL5AQ8N109 375 aa12.94□□□□□ -0.34
PVT1-220ENST00000524165 GAPTQ8N292 157 aa12.94□□□□□ -0.34
PVT1-220ENST00000524165 OR4K15Q8NH41 348 aa12.94□□□□□ -0.34
PVT1-220ENST00000524165 KIR2DL5BQ8NHK3 375 aa12.94□□□□□ -0.34
PVT1-220ENST00000524165 YPEL2Q96QA6 119 aa12.94□□□□□ -0.34
PVT1-220ENST00000524165 GPER1Q99527 375 aa12.94□□□□□ -0.34
PVT1-220ENST00000524165 FAM192AQ9GZU8 254 aa12.94□□□□□ -0.34
PVT1-220ENST00000524165 IL36GQ9NZH8 169 aa12.94□□□□□ -0.34
PVT1-220ENST00000524165 WASHC3Q9Y3C0 194 aa12.94□□□□□ -0.34
PVT1-220ENST00000524165 H0YJW9 148 aa12.93□□□□□ -0.34
PVT1-220ENST00000524165 M0R129 80 aa12.93□□□□□ -0.34
PVT1-220ENST00000524165 SPDEFO95238 335 aa12.93□□□□□ -0.34
PVT1-220ENST00000524165 CTRB1P17538 263 aa12.93□□□□□ -0.34
PVT1-220ENST00000524165 RCC1P18754 421 aaPredicted RBP12.93□□□□□ -0.34
PVT1-220ENST00000524165 PRKACGP22612 351 aa12.93□□□□□ -0.34
PVT1-220ENST00000524165 PPP1CCP36873 323 aaKnown RBP12.93□□□□□ -0.34
PVT1-220ENST00000524165 TM4SF20Q53R12 229 aa12.93□□□□□ -0.34
PVT1-220ENST00000524165 LPCAT4Q643R3 524 aa12.93□□□□□ -0.34
PVT1-220ENST00000524165 CTRB2Q6GPI1 263 aa12.93□□□□□ -0.34
PVT1-220ENST00000524165 PARP16Q8N5Y8 322 aa12.93□□□□□ -0.34
PVT1-220ENST00000524165 STPG3Q8N7X2 389 aa12.93□□□□□ -0.34
PVT1-220ENST00000524165 OR52L2PQ8NGH6 319 aa12.93□□□□□ -0.34
PVT1-220ENST00000524165 FBLIM1Q8WUP2 373 aa12.93□□□□□ -0.34
PVT1-220ENST00000524165 DNAJC9Q8WXX5 260 aa12.93□□□□□ -0.34
PVT1-220ENST00000524165 TAF9BQ9HBM6 251 aa12.93□□□□□ -0.34
PVT1-220ENST00000524165 H7C2Y5 167 aa12.92□□□□□ -0.34
PVT1-220ENST00000524165 GNGT2O14610 69 aa12.92□□□□□ -0.34
PVT1-220ENST00000524165 CT45A6P0DMU7 189 aa12.92□□□□□ -0.34
PVT1-220ENST00000524165 CT45A5P0DMU8 189 aa12.92□□□□□ -0.34
PVT1-220ENST00000524165 CT45A7P0DMV0 189 aa12.92□□□□□ -0.34
PVT1-220ENST00000524165 EDN2P20800 178 aa12.92□□□□□ -0.34
PVT1-220ENST00000524165 EPHA2P29317 976 aa12.92□□□□□ -0.34
PVT1-220ENST00000524165 HTD2P86397 168 aa12.92□□□□□ -0.34
PVT1-220ENST00000524165 ZNF85Q03923 595 aa12.92□□□□□ -0.34
PVT1-220ENST00000524165 TMEM177Q53S58 311 aa12.92□□□□□ -0.34
PVT1-220ENST00000524165 ZNF57Q68EA5 555 aaPredicted RBP12.92□□□□□ -0.34
PVT1-220ENST00000524165 ZNF554Q86TJ5 538 aa12.92□□□□□ -0.34
PVT1-220ENST00000524165 OR5AN1Q8NGI8 311 aa12.92□□□□□ -0.34
PVT1-220ENST00000524165 THRSPQ92748 146 aa12.92□□□□□ -0.34
PVT1-220ENST00000524165 GMPPBQ9Y5P6 360 aa12.92□□□□□ -0.34
PVT1-220ENST00000524165 IGLL5B9A064 214 aa12.91□□□□□ -0.34
PVT1-220ENST00000524165 LGALS9O00182 355 aa12.91□□□□□ -0.34
PVT1-220ENST00000524165 CDRT1O95170 752 aa12.91□□□□□ -0.34
PVT1-220ENST00000524165 SSBP2P81877 361 aaPredicted RBP12.91□□□□□ -0.34
PVT1-220ENST00000524165 C6orf141Q5SZD1 244 aa12.91□□□□□ -0.34
PVT1-220ENST00000524165 OR2AK2Q8NG84 335 aa12.91□□□□□ -0.34
PVT1-220ENST00000524165 TSNAXQ99598 290 aaKnown RBP12.91□□□□□ -0.34
PVT1-220ENST00000524165 ALG8Q9BVK2 526 aa12.91□□□□□ -0.34
PVT1-220ENST00000524165 JAM3Q9BX67 310 aa12.91□□□□□ -0.34
PVT1-220ENST00000524165 METTL9Q9H1A3 318 aa12.91□□□□□ -0.34
PVT1-220ENST00000524165 IFI27L2Q9H2X8 130 aa12.91□□□□□ -0.34
PVT1-220ENST00000524165 SPACA1Q9HBV2 294 aa12.91□□□□□ -0.34
PVT1-220ENST00000524165 COA4Q9NYJ1 87 aa12.91□□□□□ -0.34
PVT1-220ENST00000524165 PIPOXQ9P0Z9 390 aa12.91□□□□□ -0.34
PVT1-220ENST00000524165 OR4C45A6NMZ5 311 aa12.9□□□□□ -0.34
PVT1-220ENST00000524165 MCRIP1C9JLW8 97 aa12.9□□□□□ -0.34
PVT1-220ENST00000524165 RAB29O14966 203 aa12.9□□□□□ -0.34
PVT1-220ENST00000524165 RBMXL2O75526 392 aaKnown RBP12.9□□□□□ -0.34
PVT1-220ENST00000524165 HTR1AP08908 422 aa12.9□□□□□ -0.34
PVT1-220ENST00000524165 RAB3AP20336 220 aa12.9□□□□□ -0.34
PVT1-220ENST00000524165 CBLN1P23435 193 aa12.9□□□□□ -0.34
PVT1-220ENST00000524165 RPS16P62249 146 aaKnown RBP12.9□□□□□ -0.34
PVT1-220ENST00000524165 GLDNQ6ZMI3 551 aaPredicted RBP12.9□□□□□ -0.34
PVT1-220ENST00000524165 DHFR2Q86XF0 187 aa12.9□□□□□ -0.34
PVT1-220ENST00000524165 DEFB107AQ8IZN7 70 aa12.9□□□□□ -0.34
PVT1-220ENST00000524165 SULT4A1Q9BR01 284 aa12.9□□□□□ -0.34
PVT1-220ENST00000524165 C11orf68Q9H3H3 251 aaKnown RBP12.9□□□□□ -0.34
PVT1-220ENST00000524165 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.89□□□□□ -0.35
PVT1-220ENST00000524165 CA11O75493 328 aa12.89□□□□□ -0.35
PVT1-220ENST00000524165 MAP2K4P45985 399 aa12.89□□□□□ -0.35
PVT1-220ENST00000524165 ZNF529Q6P280 563 aa12.89□□□□□ -0.35
PVT1-220ENST00000524165 IL4I1Q96RQ9 567 aa12.89□□□□□ -0.35
PVT1-220ENST00000524165 PAK1IP1Q9NWT1 392 aaPredicted RBP12.89□□□□□ -0.35
PVT1-220ENST00000524165 KCNIP1Q9NZI2 227 aa12.89□□□□□ -0.35
PVT1-220ENST00000524165 ZNF230Q9UIE0 474 aaPredicted RBP12.89□□□□□ -0.35
PVT1-220ENST00000524165 FAM223BA6NKX1 122 aa12.88□□□□□ -0.35
PVT1-220ENST00000524165 FAM90A23PA8MXZ1 464 aa12.88□□□□□ -0.35
PVT1-220ENST00000524165 SCAF4O95104 1147 aaKnown RBP12.88□□□□□ -0.35
PVT1-220ENST00000524165 FAM107AO95990 144 aa12.88□□□□□ -0.35
PVT1-220ENST00000524165 MAS1P04201 325 aa12.88□□□□□ -0.35
PVT1-220ENST00000524165 RPSAP08865 295 aaKnown RBP12.88□□□□□ -0.35
PVT1-220ENST00000524165 ATP6V1E1P36543 226 aa12.88□□□□□ -0.35
PVT1-220ENST00000524165 MFAP2P55001 183 aa12.88□□□□□ -0.35
PVT1-220ENST00000524165 EXOSC2Q13868 293 aaKnown RBP12.88□□□□□ -0.35
PVT1-220ENST00000524165 RPL39P5Q59GN2 51 aa12.88□□□□□ -0.35
PVT1-220ENST00000524165 FAM209BQ5JX69 171 aa12.88□□□□□ -0.35
PVT1-220ENST00000524165 C12orf73Q69YU5 71 aa12.88□□□□□ -0.35
PVT1-220ENST00000524165 DMKNQ6E0U4 476 aaPredicted RBP12.88□□□□□ -0.35
PVT1-220ENST00000524165 FAM223AQ8IWN6 122 aa12.88□□□□□ -0.35
PVT1-220ENST00000524165 Q8N1X5 172 aa12.88□□□□□ -0.35
PVT1-220ENST00000524165 KCNG3Q8TAE7 436 aa12.88□□□□□ -0.35
PVT1-220ENST00000524165 PELI1Q96FA3 418 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms