RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 CCL8P80075 99 aa3.26□□□□□ -1.89
CPNE3-206ENST00000523469 FOXF1Q12946 379 aa3.26□□□□□ -1.89
CPNE3-206ENST00000523469 TRIP13Q15645 432 aaPredicted RBP3.26□□□□□ -1.89
CPNE3-206ENST00000523469 PLPPR5Q32ZL2 321 aa3.26□□□□□ -1.89
CPNE3-206ENST00000523469 TMEM176BQ3YBM2 270 aaPredicted RBP3.26□□□□□ -1.89
CPNE3-206ENST00000523469 CPTPQ5TA50 214 aa3.26□□□□□ -1.89
CPNE3-206ENST00000523469 Q5W150 140 aa3.26□□□□□ -1.89
CPNE3-206ENST00000523469 IGFL1Q6UW32 110 aa3.26□□□□□ -1.89
CPNE3-206ENST00000523469 HDDC2Q7Z4H3 204 aa3.26□□□□□ -1.89
CPNE3-206ENST00000523469 RNF182Q8N6D2 247 aa3.26□□□□□ -1.89
CPNE3-206ENST00000523469 TMEM104Q8NE00 496 aa3.26□□□□□ -1.89
CPNE3-206ENST00000523469 ACTL9Q8TC94 416 aa3.26□□□□□ -1.89
CPNE3-206ENST00000523469 EEF1AKMT1Q8WVE0 214 aa3.26□□□□□ -1.89
CPNE3-206ENST00000523469 MS4A8Q9BY19 250 aa3.26□□□□□ -1.89
CPNE3-206ENST00000523469 FBXO6Q9NRD1 293 aaPredicted RBP3.26□□□□□ -1.89
CPNE3-206ENST00000523469 DUX4Q9UBX2 424 aa3.26□□□□□ -1.89
CPNE3-206ENST00000523469 SIGLEC9Q9Y336 463 aa3.26□□□□□ -1.89
CPNE3-206ENST00000523469 HYOU1Q9Y4L1 999 aa3.26□□□□□ -1.89
CPNE3-206ENST00000523469 ZNF705GA8MUZ8 300 aaPredicted RBP3.25□□□□□ -1.89
CPNE3-206ENST00000523469 FADS1O60427 444 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 UTS2O95399 124 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 CLIC3O95833 236 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 FABP3P05413 133 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 ZNF43P17038 809 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 KITLGP21583 273 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 ELK4P28324 431 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 RRM2P31350 389 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 TGFBR2P37173 567 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 EVX1P49640 407 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 PSPHP78330 225 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 SASS6Q6UVJ0 657 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 LRRN1Q6UXK5 716 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 TRMT10CQ7L0Y3 403 aaKnown RBP3.25□□□□□ -1.89
CPNE3-206ENST00000523469 LYPD1Q8N2G4 141 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 OR51L1Q8NGJ5 315 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 OR4C13Q8NGP0 309 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 SYNPRQ8TBG9 265 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 CACNG8Q8WXS5 425 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 CREB3L1Q96BA8 519 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 LINC00477Q96M19 166 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 RTBDNQ9BSG5 229 aaPredicted RBP3.25□□□□□ -1.89
CPNE3-206ENST00000523469 PRRG3Q9BZD7 231 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 PARP12Q9H0J9 701 aaKnown RBP3.25□□□□□ -1.89
CPNE3-206ENST00000523469 OR51B5Q9H339 312 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 SIRT7Q9NRC8 400 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 TREX1Q9NSU2 369 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 MAT2BQ9NZL9 334 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 PSG8Q9UQ74 426 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 RBMX2Q9Y388 322 aaKnown RBP3.25□□□□□ -1.89
CPNE3-206ENST00000523469 USH1CQ9Y6N9 552 aa3.25□□□□□ -1.89
CPNE3-206ENST00000523469 DMBT1Q9UGM3 2413 aaPredicted RBP3.24□□□□□ -1.89
CPNE3-206ENST00000523469 HERC1Q15751 4861 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 A0A087X0T9 212 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 IGHV2OR16-5A0A0B4J2B6 119 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 KBTBD11-OT1A0A1B0GTJ5 212 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 GPR171O14626 319 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 GABARAPO95166 117 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 VAMP5O95183 116 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 KLHL2O95198 593 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 RAB3DO95716 219 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 GNAO1P09471 354 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 FAM228BP0C875 321 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 UBCP0CG48 685 aaKnown RBP3.24□□□□□ -1.89
CPNE3-206ENST00000523469 IGHV1-8P0DP01 117 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 CD28P10747 220 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 NPY1RP25929 384 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 NAA10P41227 235 aaPredicted RBP3.24□□□□□ -1.89
CPNE3-206ENST00000523469 EIF1P41567 113 aaKnown RBP3.24□□□□□ -1.89
CPNE3-206ENST00000523469 PSMD4P55036 377 aaKnown RBP3.24□□□□□ -1.89
CPNE3-206ENST00000523469 GPX6P59796 221 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 RPS23P62266 143 aaKnown RBP3.24□□□□□ -1.89
CPNE3-206ENST00000523469 ESRRGP62508 458 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 SARNPP82979 210 aaKnown RBP3.24□□□□□ -1.89
CPNE3-206ENST00000523469 CLINT1Q14677 625 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 PLECQ15149 4684 aaKnown RBP3.24□□□□□ -1.89
CPNE3-206ENST00000523469 RBMY1FQ15415 496 aaKnown RBP3.24□□□□□ -1.89
CPNE3-206ENST00000523469 VPS26BQ4G0F5 336 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 TRMT12Q53H54 448 aaKnown RBP3.24□□□□□ -1.89
CPNE3-206ENST00000523469 C6orf183Q5T699 404 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 NPSR1Q6W5P4 371 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 TEX43Q6ZNM6 134 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 RBM45Q8IUH3 476 aaKnown RBP3.24□□□□□ -1.89
CPNE3-206ENST00000523469 ARRDC1Q8N5I2 433 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 SPICQ8N5J4 248 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 ZNF709Q8N972 641 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 HSD17B11Q8NBQ5 300 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 WFDC9Q8NEX5 89 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 OR4A4PQ8NGN8 299 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 CCL17Q92583 94 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 MRGPRFQ96AM1 343 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 FAM3DQ96BQ1 224 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 ZHX1-C8orf76Q96EF9 292 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 ZNF317Q96PQ6 595 aaPredicted RBP3.24□□□□□ -1.89
CPNE3-206ENST00000523469 RBBP8Q99708 897 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 SLC29A1Q99808 456 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 EFCAB11Q9BUY7 163 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 ZNF355PQ9NSJ1 428 aa3.24□□□□□ -1.89
CPNE3-206ENST00000523469 ZNRD1Q9P1U0 126 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms