RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 FAM71F2Q6NXP2 309 aa10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 STX19Q8N4C7 294 aa10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 OR4K15Q8NH41 348 aa10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 OR52N1Q8NH53 320 aa10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 CMTM5Q96DZ9 223 aa10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 RNF5Q99942 180 aa10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 IFI27L2Q9H2X8 130 aa10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 ZNF556Q9HAH1 456 aa10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 H2AFY2Q9P0M6 372 aaPredicted RBP10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 MLXQ9UH92 298 aa10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 GNG8Q9UK08 70 aa10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 ING4Q9UNL4 249 aa10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 UBR4Q5T4S7 5183 aa10.19□□□□□ -0.78
NKX3-1-202ENST00000523261 H7C2Y5 167 aa10.19□□□□□ -0.78
NKX3-1-202ENST00000523261 MC5RP33032 325 aa10.19□□□□□ -0.78
NKX3-1-202ENST00000523261 LGALS7P47929 136 aa10.19□□□□□ -0.78
NKX3-1-202ENST00000523261 RPS16P62249 146 aaKnown RBP10.19□□□□□ -0.78
NKX3-1-202ENST00000523261 EFNB1P98172 346 aa10.19□□□□□ -0.78
NKX3-1-202ENST00000523261 EXOSC2Q13868 293 aaKnown RBP10.19□□□□□ -0.78
NKX3-1-202ENST00000523261 LGALS9BQ3B8N2 356 aa10.19□□□□□ -0.78
NKX3-1-202ENST00000523261 TRAT1Q6PIZ9 186 aa10.19□□□□□ -0.78
NKX3-1-202ENST00000523261 C5orf24Q7Z6I8 188 aa10.19□□□□□ -0.78
NKX3-1-202ENST00000523261 HS3ST5Q8IZT8 346 aa10.19□□□□□ -0.78
NKX3-1-202ENST00000523261 GAPTQ8N292 157 aa10.19□□□□□ -0.78
NKX3-1-202ENST00000523261 POM121L12Q8N7R1 296 aa10.19□□□□□ -0.78
NKX3-1-202ENST00000523261 KCNG3Q8TAE7 436 aa10.19□□□□□ -0.78
NKX3-1-202ENST00000523261 TMEM68Q96MH6 324 aa10.19□□□□□ -0.78
NKX3-1-202ENST00000523261 TAF9BQ9HBM6 251 aa10.19□□□□□ -0.78
NKX3-1-202ENST00000523261 COA4Q9NYJ1 87 aa10.19□□□□□ -0.78
NKX3-1-202ENST00000523261 ZNF230Q9UIE0 474 aaPredicted RBP10.19□□□□□ -0.78
NKX3-1-202ENST00000523261 JPT1Q9UK76 154 aa10.19□□□□□ -0.78
NKX3-1-202ENST00000523261 WASHC3Q9Y3C0 194 aa10.19□□□□□ -0.78
NKX3-1-202ENST00000523261 FAM90A23PA8MXZ1 464 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 C16orf90A8MZG2 172 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 HMGB1P1B2RPK0 211 aaPredicted RBP10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 C11orf94C9JXX5 98 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 LGALS9O00182 355 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 YPEL1O60688 119 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 CDRT1O95170 752 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 SPDEFO95238 335 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 CRISP1P54107 249 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 MPV17LQ2QL34 196 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 LY6G6FQ5SQ64 297 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 FDX2Q6P4F2 183 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 FAM220AQ7Z4H9 259 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 LINC00596Q86U02 117 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 OR10H4Q8NGA5 316 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 OR5AN1Q8NGI8 311 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 OR5D14Q8NGL3 314 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 THRSPQ92748 146 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 YPEL2Q96QA6 119 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 GPER1Q99527 375 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 RARRES2Q99969 163 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 FAM192AQ9GZU8 254 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 ENOPH1Q9UHY7 261 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 DMRT1Q9Y5R6 373 aa10.18□□□□□ -0.78
NKX3-1-202ENST00000523261 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.17□□□□□ -0.78
NKX3-1-202ENST00000523261 TMEM213A2RRL7 107 aa10.17□□□□□ -0.78
NKX3-1-202ENST00000523261 RPL35AP18077 110 aaKnown RBP10.17□□□□□ -0.78
NKX3-1-202ENST00000523261 PRKACGP22612 351 aa10.17□□□□□ -0.78
NKX3-1-202ENST00000523261 EPHA2P29317 976 aa10.17□□□□□ -0.78
NKX3-1-202ENST00000523261 RBMY1FQ15415 496 aaKnown RBP10.17□□□□□ -0.78
NKX3-1-202ENST00000523261 FAM98BQ52LJ0 330 aaKnown RBP10.17□□□□□ -0.78
NKX3-1-202ENST00000523261 RPL39P5Q59GN2 51 aa10.17□□□□□ -0.78
NKX3-1-202ENST00000523261 SERPINA12Q8IW75 414 aa10.17□□□□□ -0.78
NKX3-1-202ENST00000523261 OR1L6Q8NGR2 347 aa10.17□□□□□ -0.78
NKX3-1-202ENST00000523261 TMEM163Q8TC26 289 aa10.17□□□□□ -0.78
NKX3-1-202ENST00000523261 CPNE2Q96FN4 548 aaPredicted RBP10.17□□□□□ -0.78
NKX3-1-202ENST00000523261 TSNAXQ99598 290 aaKnown RBP10.17□□□□□ -0.78
NKX3-1-202ENST00000523261 ALG8Q9BVK2 526 aa10.17□□□□□ -0.78
NKX3-1-202ENST00000523261 MAP6D1Q9H9H5 199 aa10.17□□□□□ -0.78
NKX3-1-202ENST00000523261 AKIP1Q9NQ31 210 aa10.17□□□□□ -0.78
NKX3-1-202ENST00000523261 IL36GQ9NZH8 169 aa10.17□□□□□ -0.78
NKX3-1-202ENST00000523261 UBQLN2Q9UHD9 624 aa10.17□□□□□ -0.78
NKX3-1-202ENST00000523261 IGHV4-4A0A075B6R2 117 aa10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 OR4C45A6NMZ5 311 aa10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 PPP5D1E7EU14 171 aa10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 H3BNX3 289 aa10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 CST1P01037 141 aa10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 HLA-AP01891 365 aaKnown RBP10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 ANXA8P13928 327 aa10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 PRDX6P30041 224 aa10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 CCR9P51686 369 aa10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 RHOGP84095 191 aa10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 HTD2P86397 168 aa10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 ZNF85Q03923 595 aa10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 PJVKQ0ZLH3 352 aa10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 RIPK1Q13546 671 aa10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 PTGES3Q15185 160 aaKnown RBP10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 C6orf141Q5SZD1 244 aa10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 GID4Q8IVV7 300 aa10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 PARP16Q8N5Y8 322 aa10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 UXS1Q8NBZ7 420 aa10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 ADAD2Q8NCV1 583 aaKnown RBP10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 OR2AK2Q8NG84 335 aa10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 ELAC2Q9BQ52 826 aaKnown RBP10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 PIPOXQ9P0Z9 390 aa10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 WARS2Q9UGM6 360 aaKnown RBP10.16□□□□□ -0.78
NKX3-1-202ENST00000523261 TRAV25A0A0B4J276 109 aa10.15□□□□□ -0.78
NKX3-1-202ENST00000523261 FAM223BA6NKX1 122 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms