RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 LINC01619G3V211 115 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 RRHO14718 337 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 RGS11O94810 467 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 NDUFA3O95167 84 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 GLAP06280 429 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 GSTP1P09211 210 aaKnown RBP11.91□□□□□ -0.5
MRPS28-209ENST00000522987 CT45A6P0DMU7 189 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 CT45A5P0DMU8 189 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 CT45A7P0DMV0 189 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 GP9P14770 177 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 HTR2CP28335 458 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 INSL3P51460 131 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 LINC00205P59089 165 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 TAS2R43P59537 309 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 RBM48Q5RL73 367 aaKnown RBP11.91□□□□□ -0.5
MRPS28-209ENST00000522987 TTC23Q5W5X9 447 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 ZNF429Q86V71 674 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 DHRSXQ8N5I4 330 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 NKAIN3Q8N8D7 197 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 DRAXINQ8NBI3 349 aaPredicted RBP11.91□□□□□ -0.5
MRPS28-209ENST00000522987 SETD9Q8NE22 299 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 BPIFB6Q8NFQ5 453 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 NPBQ8NG41 125 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 CHCHD6Q9BRQ6 235 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 TOLLIPQ9H0E2 274 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 CST11Q9H112 138 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 ABRACLQ9P1F3 81 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 OR1A1Q9P1Q5 309 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 STEAP1Q9UHE8 339 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 RNF150Q9ULK6 438 aa11.91□□□□□ -0.5
MRPS28-209ENST00000522987 FOXA2Q9Y261 457 aaPredicted RBP11.91□□□□□ -0.5
MRPS28-209ENST00000522987 EFCAB10A6NFE3 127 aa11.9□□□□□ -0.5
MRPS28-209ENST00000522987 LGALS1P09382 135 aaKnown RBP11.9□□□□□ -0.5
MRPS28-209ENST00000522987 EGR2P11161 476 aaPredicted RBP11.9□□□□□ -0.5
MRPS28-209ENST00000522987 WNT4P56705 351 aa11.9□□□□□ -0.5
MRPS28-209ENST00000522987 TPPP2P59282 170 aa11.9□□□□□ -0.5
MRPS28-209ENST00000522987 DEFA5Q01523 94 aa11.9□□□□□ -0.5
MRPS28-209ENST00000522987 C19orf54Q5BKX5 351 aa11.9□□□□□ -0.5
MRPS28-209ENST00000522987 CASC10Q5T4H9 136 aa11.9□□□□□ -0.5
MRPS28-209ENST00000522987 ZFAND6Q6FIF0 208 aa11.9□□□□□ -0.5
MRPS28-209ENST00000522987 UNQ5815/PRO19632Q6UWF5 114 aa11.9□□□□□ -0.5
MRPS28-209ENST00000522987 PPP1R27Q86WC6 154 aa11.9□□□□□ -0.5
MRPS28-209ENST00000522987 CDH26Q8IXH8 852 aa11.9□□□□□ -0.5
MRPS28-209ENST00000522987 SVOPQ8N4V2 548 aa11.9□□□□□ -0.5
MRPS28-209ENST00000522987 UQCC2Q9BRT2 126 aa11.9□□□□□ -0.5
MRPS28-209ENST00000522987 RSRP1Q9BUV0 290 aa11.9□□□□□ -0.5
MRPS28-209ENST00000522987 TMED9Q9BVK6 235 aa11.9□□□□□ -0.5
MRPS28-209ENST00000522987 TMEM59Q9BXS4 323 aa11.9□□□□□ -0.5
MRPS28-209ENST00000522987 SLC23A1Q9UHI7 598 aa11.9□□□□□ -0.5
MRPS28-209ENST00000522987 ERGIC3Q9Y282 383 aa11.9□□□□□ -0.5
MRPS28-209ENST00000522987 TNCP24821 2201 aa11.89□□□□□ -0.51
MRPS28-209ENST00000522987 A0A0A6YYD4 124 aa11.89□□□□□ -0.51
MRPS28-209ENST00000522987 RPS27AP62979 156 aaKnown RBP11.89□□□□□ -0.51
MRPS28-209ENST00000522987 PITPNAQ00169 270 aa11.89□□□□□ -0.51
MRPS28-209ENST00000522987 UNC119Q13432 240 aa11.89□□□□□ -0.51
MRPS28-209ENST00000522987 ACSM3Q53FZ2 586 aa11.89□□□□□ -0.51
MRPS28-209ENST00000522987 LRRTM1Q86UE6 522 aa11.89□□□□□ -0.51
MRPS28-209ENST00000522987 LFNGQ8NES3 379 aa11.89□□□□□ -0.51
MRPS28-209ENST00000522987 TPSG1Q9NRR2 321 aa11.89□□□□□ -0.51
MRPS28-209ENST00000522987 METTL1Q9UBP6 276 aaKnown RBP11.89□□□□□ -0.51
MRPS28-209ENST00000522987 PSORS1C1Q9UIG5 152 aa11.89□□□□□ -0.51
MRPS28-209ENST00000522987 H0YJW9 148 aa11.88□□□□□ -0.51
MRPS28-209ENST00000522987 RAB29O14966 203 aa11.88□□□□□ -0.51
MRPS28-209ENST00000522987 CA2P00918 260 aa11.88□□□□□ -0.51
MRPS28-209ENST00000522987 MAPK3P27361 379 aaPredicted RBP11.88□□□□□ -0.51
MRPS28-209ENST00000522987 P2RY14Q15391 338 aa11.88□□□□□ -0.51
MRPS28-209ENST00000522987 ACTBL2Q562R1 376 aa11.88□□□□□ -0.51
MRPS28-209ENST00000522987 ZNF660Q6AZW8 331 aaPredicted RBP11.88□□□□□ -0.51
MRPS28-209ENST00000522987 ACSM6Q6P461 480 aa11.88□□□□□ -0.51
MRPS28-209ENST00000522987 ZNF554Q86TJ5 538 aa11.88□□□□□ -0.51
MRPS28-209ENST00000522987 C8orf59Q8N0T1 100 aaPredicted RBP11.88□□□□□ -0.51
MRPS28-209ENST00000522987 NANOGP1Q8N7R0 232 aa11.88□□□□□ -0.51
MRPS28-209ENST00000522987 GRPEL2Q8TAA5 225 aa11.88□□□□□ -0.51
MRPS28-209ENST00000522987 ZNF355PQ9NSJ1 428 aa11.88□□□□□ -0.51
MRPS28-209ENST00000522987 PIPOXQ9P0Z9 390 aa11.88□□□□□ -0.51
MRPS28-209ENST00000522987 AK3Q9UIJ7 227 aa11.88□□□□□ -0.51
MRPS28-209ENST00000522987 WASHC3Q9Y3C0 194 aa11.88□□□□□ -0.51
MRPS28-209ENST00000522987 NUBP2Q9Y5Y2 271 aa11.88□□□□□ -0.51
MRPS28-209ENST00000522987 ANKRD34BA5PLL1 514 aa11.87□□□□□ -0.51
MRPS28-209ENST00000522987 SOCS1O15524 211 aa11.87□□□□□ -0.51
MRPS28-209ENST00000522987 PSG5Q15238 335 aa11.87□□□□□ -0.51
MRPS28-209ENST00000522987 GLT8D1Q68CQ7 371 aa11.87□□□□□ -0.51
MRPS28-209ENST00000522987 OR6Q1Q8NGQ2 317 aa11.87□□□□□ -0.51
MRPS28-209ENST00000522987 OR4C12Q96R67 309 aa11.87□□□□□ -0.51
MRPS28-209ENST00000522987 C11orf54Q9H0W9 315 aaPredicted RBP11.87□□□□□ -0.51
MRPS28-209ENST00000522987 GHITMQ9H3K2 345 aa11.87□□□□□ -0.51
MRPS28-209ENST00000522987 PALMDQ9NP74 551 aa11.87□□□□□ -0.51
MRPS28-209ENST00000522987 PLEKHJ1Q9NW61 149 aa11.87□□□□□ -0.51
MRPS28-209ENST00000522987 CNOT2Q9NZN8 540 aaKnown RBP11.87□□□□□ -0.51
MRPS28-209ENST00000522987 GHRLQ9UBU3 117 aa11.87□□□□□ -0.51
MRPS28-209ENST00000522987 DNAH7Q8WXX0 4024 aa11.86□□□□□ -0.51
MRPS28-209ENST00000522987 OR5H14A6NHG9 310 aa11.86□□□□□ -0.51
MRPS28-209ENST00000522987 HSPA12AO43301 675 aa11.86□□□□□ -0.51
MRPS28-209ENST00000522987 NAPSAO96009 420 aa11.86□□□□□ -0.51
MRPS28-209ENST00000522987 TRGV3P03979 118 aa11.86□□□□□ -0.51
MRPS28-209ENST00000522987 SCTP09683 121 aa11.86□□□□□ -0.51
MRPS28-209ENST00000522987 UBBP0CG47 229 aa11.86□□□□□ -0.51
MRPS28-209ENST00000522987 LYL1P12980 280 aa11.86□□□□□ -0.51
MRPS28-209ENST00000522987 CPEP16870 476 aa11.86□□□□□ -0.51
MRPS28-209ENST00000522987 CEACAM6P40199 344 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms