RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 IGHV3-43A0A0B4J1X8 118 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 CCDC182A6NF36 153 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 EDF1O60869 148 aaKnown RBP4.7□□□□□ -1.66
VPS13B-211ENST00000522802 GATBO75879 557 aaKnown RBP4.7□□□□□ -1.66
VPS13B-211ENST00000522802 KDM4BO94953 1096 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 CSN3P07498 182 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 IGHV3-43DP0DP04 118 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 FASP25445 335 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 VHLP40337 213 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 AMTP48728 403 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 RIDAP52758 137 aaKnown RBP4.7□□□□□ -1.66
VPS13B-211ENST00000522802 TNFRSF9Q07011 255 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 RAB40BQ12829 278 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 KLF5Q13887 457 aaPredicted RBP4.7□□□□□ -1.66
VPS13B-211ENST00000522802 RSBN1Q5VWQ0 802 aaPredicted RBP4.7□□□□□ -1.66
VPS13B-211ENST00000522802 GLYATQ6IB77 296 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 DEGS2Q6QHC5 323 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 LINC00336Q6ZUF6 198 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 CHST4Q8NCG5 386 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 TEX47Q8TBZ9 253 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 DYDC1Q8WWB3 177 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 PYURFQ96I23 114 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 NR1H4Q96RI1 486 aaPredicted RBP4.7□□□□□ -1.66
VPS13B-211ENST00000522802 APOL4Q9BPW4 351 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 NIPSNAP1Q9BPW8 284 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 ABCD2Q9UBJ2 740 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 MRM2Q9UI43 246 aaKnown RBP4.7□□□□□ -1.66
VPS13B-211ENST00000522802 OR52A1Q9UKL2 312 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 AP3M1Q9Y2T2 418 aa4.7□□□□□ -1.66
VPS13B-211ENST00000522802 TRAV24A0A0B4J272 114 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 OR11H12B2RN74 326 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 H0YJX3 145 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 TNFRSF11BO00300 401 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 SDCBPO00560 298 aaPredicted RBP4.69□□□□□ -1.66
VPS13B-211ENST00000522802 XRCC3O43542 346 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 ZNF254O75437 659 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 CCNB2O95067 398 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 CYB5AP00167 134 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 TRBV12-3P01733 135 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 MAGEA2P43356 314 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 RBP2P50120 134 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 ALDH3A2P51648 485 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 CRIP2P52943 208 aaPredicted RBP4.69□□□□□ -1.66
VPS13B-211ENST00000522802 MTCP1P56278 107 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 ACTBP60709 375 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 PDZK1IP1Q13113 114 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 APOFQ13790 326 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 C5orf64Q2M2E5 130 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 PAN3Q58A45 887 aaKnown RBP4.69□□□□□ -1.66
VPS13B-211ENST00000522802 PARP16Q8N5Y8 322 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 ZNF565Q8N9K5 539 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 ADAT3Q96EY9 351 aaPredicted RBP4.69□□□□□ -1.66
VPS13B-211ENST00000522802 ZNF479Q96JC4 524 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 SIKE1Q9BRV8 207 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 FAM103A1Q9BTL3 118 aaKnown RBP4.69□□□□□ -1.66
VPS13B-211ENST00000522802 YIPF3Q9GZM5 350 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 KRT84Q9NSB2 600 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 GAB2Q9UQC2 676 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 SELENOKQ9Y6D0 94 aa4.69□□□□□ -1.66
VPS13B-211ENST00000522802 LOC107986453A0A1B0GWG9 222 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 H3BN98 237 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 C15orf65H3BRN8 121 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 J3KRW8 73 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 DEGS1O15121 323 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 ARPC2O15144 300 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 RTL8CO15255 209 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 NBR2O15453 112 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 SYT7O43581 403 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 E2F6O75461 281 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 RPP14O95059 124 aaKnown RBP4.68□□□□□ -1.66
VPS13B-211ENST00000522802 TRGV3P03979 118 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 ZP3P21754 424 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 IL3RAP26951 378 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 C21orf33P30042 268 aaPredicted RBP4.68□□□□□ -1.66
VPS13B-211ENST00000522802 ZNF137PP52743 207 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 ATP1B3P54709 279 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 CXCR4P61073 352 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 DEFB135Q30KP9 77 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 ACTBL2Q562R1 376 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 SLC35D3Q5M8T2 416 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 CGB2Q6NT52 195 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 ZNF322Q6U7Q0 402 aaPredicted RBP4.68□□□□□ -1.66
VPS13B-211ENST00000522802 SLC25A48Q6ZT89 311 aaKnown RBP4.68□□□□□ -1.66
VPS13B-211ENST00000522802 SSX6Q7RTT6 188 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 NOXA1Q86UR1 476 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 LAX1Q8IWV1 398 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 LINC00311Q8N616 119 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 MAPKAPK5-AS1Q8N8E1 139 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 ZNF439Q8NDP4 499 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 OR10A7Q8NGE5 316 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 ASB17Q8WXJ9 295 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 MCUR1Q96AQ8 359 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 GGTLC1Q9BX51 225 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 DGCR6LQ9BY27 220 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 MRPL20Q9BYC9 149 aaKnown RBP4.68□□□□□ -1.66
VPS13B-211ENST00000522802 CST11Q9H112 138 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 SLC2A8Q9NY64 477 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 CNOT2Q9NZN8 540 aaKnown RBP4.68□□□□□ -1.66
VPS13B-211ENST00000522802 SNX5Q9Y5X3 404 aa4.68□□□□□ -1.66
VPS13B-211ENST00000522802 APOBP04114 4563 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms