RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 TMEM17Q86X19 198 aa13.2□□□□□ -0.3
LSM1-204ENST00000522515 ODF3L1Q8IXM7 274 aa13.2□□□□□ -0.3
LSM1-204ENST00000522515 LYG1Q8N1E2 194 aa13.2□□□□□ -0.3
LSM1-204ENST00000522515 OR51S1Q8NGJ8 323 aa13.2□□□□□ -0.3
LSM1-204ENST00000522515 C17orf50Q8WW18 174 aa13.2□□□□□ -0.3
LSM1-204ENST00000522515 DEDD2Q8WXF8 326 aa13.2□□□□□ -0.3
LSM1-204ENST00000522515 RBM7Q9Y580 266 aaKnown RBP13.2□□□□□ -0.3
LSM1-204ENST00000522515 OR5H14A6NHG9 310 aa13.19□□□□□ -0.3
LSM1-204ENST00000522515 DISC1C4P0D8 188 aa13.19□□□□□ -0.3
LSM1-204ENST00000522515 HTR1DP28221 377 aa13.19□□□□□ -0.3
LSM1-204ENST00000522515 FAUP35544 74 aaKnown RBP13.19□□□□□ -0.3
LSM1-204ENST00000522515 LUMP51884 338 aaPredicted RBP13.19□□□□□ -0.3
LSM1-204ENST00000522515 DIAPH2-AS1Q14236 149 aa13.19□□□□□ -0.3
LSM1-204ENST00000522515 SCGB2B2Q4G0G5 96 aa13.19□□□□□ -0.3
LSM1-204ENST00000522515 AADACL3Q5VUY0 350 aa13.19□□□□□ -0.3
LSM1-204ENST00000522515 LHFPL1Q86WI0 220 aa13.19□□□□□ -0.3
LSM1-204ENST00000522515 TEX29Q8N6K0 151 aa13.19□□□□□ -0.3
LSM1-204ENST00000522515 C22orf15Q8WYQ4 148 aa13.19□□□□□ -0.3
LSM1-204ENST00000522515 BORCS5Q969J3 196 aa13.19□□□□□ -0.3
LSM1-204ENST00000522515 MOB3AQ96BX8 217 aa13.19□□□□□ -0.3
LSM1-204ENST00000522515 AJUBAQ96IF1 538 aa13.19□□□□□ -0.3
LSM1-204ENST00000522515 OR2D2Q9H210 308 aa13.19□□□□□ -0.3
LSM1-204ENST00000522515 SONP18583 2426 aaKnown RBP13.19□□□□□ -0.3
LSM1-204ENST00000522515 LY6LH3BQJ8 138 aa13.18□□□□□ -0.3
LSM1-204ENST00000522515 HNF1AP20823 631 aa13.18□□□□□ -0.3
LSM1-204ENST00000522515 EPHA1P21709 976 aa13.18□□□□□ -0.3
LSM1-204ENST00000522515 PAX6P26367 422 aa13.18□□□□□ -0.3
LSM1-204ENST00000522515 BPIFB3P59826 476 aa13.18□□□□□ -0.3
LSM1-204ENST00000522515 HERV-K104P61576 105 aa13.18□□□□□ -0.3
LSM1-204ENST00000522515 BCL6BQ8N143 479 aaPredicted RBP13.18□□□□□ -0.3
LSM1-204ENST00000522515 TERB2Q8NHR7 220 aa13.18□□□□□ -0.3
LSM1-204ENST00000522515 SECTM1Q8WVN6 248 aa13.18□□□□□ -0.3
LSM1-204ENST00000522515 TOMM40LQ969M1 308 aa13.18□□□□□ -0.3
LSM1-204ENST00000522515 ST6GALNAC6Q969X2 333 aa13.18□□□□□ -0.3
LSM1-204ENST00000522515 MRGPRFQ96AM1 343 aa13.18□□□□□ -0.3
LSM1-204ENST00000522515 FXYD6Q9H0Q3 95 aa13.18□□□□□ -0.3
LSM1-204ENST00000522515 DPM3Q9P2X0 92 aa13.18□□□□□ -0.3
LSM1-204ENST00000522515 TBC1D24Q9ULP9 559 aa13.18□□□□□ -0.3
LSM1-204ENST00000522515 TBL2Q9Y4P3 447 aaKnown RBP13.18□□□□□ -0.3
LSM1-204ENST00000522515 AMMECR1Q9Y4X0 333 aaPredicted RBP13.18□□□□□ -0.3
LSM1-204ENST00000522515 ANK3Q12955 4377 aaKnown RBP13.17□□□□□ -0.3
LSM1-204ENST00000522515 SAA2-SAA4A0A096LPE2 208 aa13.17□□□□□ -0.3
LSM1-204ENST00000522515 A0A0U1RQK1 487 aa13.17□□□□□ -0.3
LSM1-204ENST00000522515 INAFM1C9JVW0 142 aa13.17□□□□□ -0.3
LSM1-204ENST00000522515 PROP1O75360 226 aa13.17□□□□□ -0.3
LSM1-204ENST00000522515 SAA2P0DJI9 122 aaPredicted RBP13.17□□□□□ -0.3
LSM1-204ENST00000522515 SRP14P37108 136 aaKnown RBP13.17□□□□□ -0.3
LSM1-204ENST00000522515 ZNF137PP52743 207 aa13.17□□□□□ -0.3
LSM1-204ENST00000522515 MINOS1Q5TGZ0 78 aa13.17□□□□□ -0.3
LSM1-204ENST00000522515 C16orf87Q6PH81 154 aa13.17□□□□□ -0.3
LSM1-204ENST00000522515 DYNAPQ8N1N2 210 aa13.17□□□□□ -0.3
LSM1-204ENST00000522515 CREB3L1Q96BA8 519 aa13.17□□□□□ -0.3
LSM1-204ENST00000522515 PRRT1Q99946 306 aa13.17□□□□□ -0.3
LSM1-204ENST00000522515 ZNF251Q9BRH9 671 aa13.17□□□□□ -0.3
LSM1-204ENST00000522515 MS4A7Q9GZW8 240 aaPredicted RBP13.17□□□□□ -0.3
LSM1-204ENST00000522515 CCL28Q9NRJ3 127 aa13.17□□□□□ -0.3
LSM1-204ENST00000522515 SLC2A8Q9NY64 477 aa13.17□□□□□ -0.3
LSM1-204ENST00000522515 PIPOXQ9P0Z9 390 aa13.17□□□□□ -0.3
LSM1-204ENST00000522515 MINOS1-NBL1R4GNA1 71 aa13.17□□□□□ -0.3
LSM1-204ENST00000522515 HIVEP2P31629 2446 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 CENPXA8MT69 81 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 LEUTXA8MZ59 168 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 RAB29O14966 203 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 LYRM1O43325 122 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 IGLV2-14P01704 120 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 GPR12P47775 334 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 SSX2Q16385 188 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 RPL39P5Q59GN2 51 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 TPTE2P1Q5T6R2 138 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 IDO2Q6ZQW0 420 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 OR13C8Q8NGS7 320 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 FAM216AQ8WUB2 273 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 C5orf30Q96GV9 206 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 C7orf50Q9BRJ6 194 aaKnown RBP13.16□□□□□ -0.3
LSM1-204ENST00000522515 BEX2Q9BXY8 128 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 SLC5A7Q9GZV3 580 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 GHITMQ9H3K2 345 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 SDHAF2Q9NX18 166 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 SCP2D1Q9UJQ7 156 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 ZNF221Q9UK13 617 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 HILPDAQ9Y5L2 63 aa13.16□□□□□ -0.3
LSM1-204ENST00000522515 NAP1L6A6NFF2 107 aa13.15□□□□□ -0.3
LSM1-204ENST00000522515 HSD17B6O14756 317 aa13.15□□□□□ -0.3
LSM1-204ENST00000522515 IL3RAP26951 378 aa13.15□□□□□ -0.3
LSM1-204ENST00000522515 BTCP35070 178 aa13.15□□□□□ -0.3
LSM1-204ENST00000522515 CEACAM3P40198 252 aa13.15□□□□□ -0.3
LSM1-204ENST00000522515 REG1BP48304 166 aa13.15□□□□□ -0.3
LSM1-204ENST00000522515 ZNF833PQ6ZTB9 187 aa13.15□□□□□ -0.3
LSM1-204ENST00000522515 C9orf139Q6ZV77 190 aa13.15□□□□□ -0.3
LSM1-204ENST00000522515 ZNF645Q8N7E2 425 aa13.15□□□□□ -0.3
LSM1-204ENST00000522515 MALSU1Q96EH3 234 aa13.15□□□□□ -0.3
LSM1-204ENST00000522515 CDC42EP3Q9UKI2 254 aa13.15□□□□□ -0.3
LSM1-204ENST00000522515 GNRHRP30968 328 aa13.15□□□□□ -0.3
LSM1-204ENST00000522515 CCR6P51684 374 aa13.15□□□□□ -0.3
LSM1-204ENST00000522515 BAMBIQ13145 260 aa13.15□□□□□ -0.3
LSM1-204ENST00000522515 ASAH1Q13510 395 aa13.15□□□□□ -0.3
LSM1-204ENST00000522515 ZNF818PQ6ZRF7 136 aa13.15□□□□□ -0.3
LSM1-204ENST00000522515 DRAM1Q8N682 238 aa13.15□□□□□ -0.3
LSM1-204ENST00000522515 MARCH1Q8TCQ1 289 aa13.15□□□□□ -0.3
LSM1-204ENST00000522515 RTN4IP1Q8WWV3 396 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms