RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 TAS2R43P59537 309 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 TAS2R20P59543 309 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 RPS20P60866 119 aaKnown RBP2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 UBE2MP61081 183 aaKnown RBP2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 RPS15AP62244 130 aaKnown RBP2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 SELENOTP62341 195 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 RPL32P62910 135 aaKnown RBP2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 BTG2P78543 158 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 NDPQ00604 133 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 CLINT1Q14677 625 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 CDK5R1Q15078 307 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 PRR4Q16378 134 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 PRSS8Q16651 343 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 HIKESHIQ53FT3 197 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 ACSM3Q53FZ2 586 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF311Q5JNZ3 666 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 HIST2H3PS2Q5TEC6 136 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC25A24Q6NUK1 477 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 DEGS2Q6QHC5 323 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 FBXW12Q6X9E4 464 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 STAC2Q6ZMT1 411 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 HIST2H3AQ71DI3 136 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 SSX6Q7RTT6 188 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 TMCO2Q7Z6W1 182 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 LINC01551Q86U37 167 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 LYPD6Q86Y78 171 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 SYS1Q8N2H4 156 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZSCAN4Q8NAM6 433 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR2T33Q8NG76 320 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR2L3Q8NG85 312 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR4S1Q8NGB4 309 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR8U1Q8NH10 309 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 Q8WTZ3 238 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 C15orf40Q8WUR7 153 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 PPP1R1CQ8WVI7 109 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 IL1F10Q8WWZ1 152 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 ASB17Q8WXJ9 295 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 C22orf15Q8WYQ4 148 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 MAFIPQ8WZ33 124 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 FRZBQ92765 325 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 GHSRQ92847 366 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 SMARCD2Q92925 531 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 RAB8BQ92930 207 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 S100PBPQ96BU1 408 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 CYYR1Q96J86 154 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 DERL3Q96Q80 235 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR2A5Q96R48 311 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR7D2Q96RA2 312 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 SDF2Q99470 211 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 PRSS27Q9BQR3 290 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC25A21Q9BQT8 299 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 GINS4Q9BRT9 223 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF471Q9BX82 626 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 SUCNR1Q9BXA5 334 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 NMES1Q9C002 83 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 SMDT1Q9H4I9 107 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 RERGLQ9H628 205 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 FN3KRPQ9HA64 309 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 LYRM4Q9HD34 91 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC2A9Q9NRM0 540 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 CMC2Q9NRP2 79 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 TMEM242Q9NWH2 141 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 SOHLH2Q9NX45 425 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 KLHL28Q9NXS3 571 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 TAC3Q9UHF0 121 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 VAX2Q9UIW0 290 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 IKZF2Q9UKS7 526 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 CELA1Q9UNI1 258 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZFP30Q9Y2G7 519 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 PCYT1BQ9Y5K3 369 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 WIF1Q9Y5W5 379 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 KCNE3Q9Y6H6 103 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLCO1B1Q9Y6L6 691 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF780BQ9Y6R6 833 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 LRRK1Q38SD2 2015 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 A0A0B4J2A0 478 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 A0A1W2PNU3 283 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 TLCD2A6NGC4 264 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 TVP23AA6NH52 213 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR2AT4A6NND4 320 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF705EA8MWA4 302 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 C4orf51C9J302 202 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 TMEM238C9JI98 176 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 E9PLD3 99 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 HSD17B6O14756 317 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 PPP1R2P9O14990 202 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 ARPC3O15145 178 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 ERI3O43414 337 aaKnown RBP2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 TGOLN2O43493 480 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 SOX15O60248 233 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 FCMRO60667 390 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 FARS2O95363 451 aaKnown RBP2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 GPR75O95800 540 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 HPRT1P00492 218 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 OPN1MWP04001 364 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 ARG1P05089 322 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 CTXN2P0C2S0 81 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 OPN1MW2P0DN77 364 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 OPN1MW3P0DN78 364 aa2.34□□□□□ -2.03
HMGB1P41-201ENST00000520234 PTHLHP12272 177 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms