RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 C11orf1Q9H5F2 150 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 HHLA2Q9UM44 414 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 MRPS16Q9Y3D3 137 aaKnown RBP1.13□□□□□ -2.23
SKP1-203ENST00000517625 SYNE2Q8WXH0 6885 aaKnown RBP1.13□□□□□ -2.23
SKP1-203ENST00000517625 KMT2EQ8IZD2 1858 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 SLIT2O94813 1529 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 NUP205Q92621 2012 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 FBN1P35555 2871 aaKnown RBP1.13□□□□□ -2.23
SKP1-203ENST00000517625 CLUHO75153 1309 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 VWDEQ8N2E2 1590 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 SPG11Q96JI7 2443 aa1.13□□□□□ -2.23
SKP1-203ENST00000517625 TRIOBPQ9H2D6 2365 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 BPTFQ12830 3046 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 LINC00862A6NCI5 91 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 TMEM235A6NFC5 223 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 UBFD1O14562 309 aaKnown RBP1.12□□□□□ -2.23
SKP1-203ENST00000517625 TOX3O15405 576 aaPredicted RBP1.12□□□□□ -2.23
SKP1-203ENST00000517625 TRAPPC3O43617 180 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 LY6HO94772 140 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 GZMBP10144 247 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 CD36P16671 472 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 CFL1P23528 166 aaKnown RBP1.12□□□□□ -2.23
SKP1-203ENST00000517625 PPP1CCP36873 323 aaKnown RBP1.12□□□□□ -2.23
SKP1-203ENST00000517625 CD200P41217 278 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 CRATP43155 626 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 SULT1A2P50226 295 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 ZNF140P52738 457 aaPredicted RBP1.12□□□□□ -2.23
SKP1-203ENST00000517625 TSPEAR-AS2P59090 65 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 XRCC4Q13426 336 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 SS18Q15532 418 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 KRTAP13-4Q3LI77 160 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 RASL11AQ6T310 242 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 DOLPP1Q86YN1 238 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 NATD1Q8N6N6 113 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 TMEM75Q8N9X5 138 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 OR11H1Q8NG94 326 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 OR5L1Q8NGL2 311 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 ACY3Q96HD9 319 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 ZNF251Q9BRH9 671 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 ZNF471Q9BX82 626 aaPredicted RBP1.12□□□□□ -2.23
SKP1-203ENST00000517625 GNB1LQ9BYB4 327 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 MED28Q9H204 178 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 NDUFB11Q9NX14 153 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 FAM206AQ9NX38 181 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 DNAJC12Q9UKB3 198 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 ZNF292O60281 2723 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 LTBP2Q14767 1821 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 C2CD3Q4AC94 2353 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 LRRK2Q5S007 2527 aa1.12□□□□□ -2.23
SKP1-203ENST00000517625 ERICH2A1L162 156 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 C19orf71A6NCJ1 209 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 IQCF5A8MTL0 148 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 H3BRN7 92 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 COPEO14579 308 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 ZNF189O75820 626 aaPredicted RBP1.11□□□□□ -2.23
SKP1-203ENST00000517625 ARL6IP5O75915 188 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 BRI3O95415 125 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 HBZP02008 142 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 NPPCP23582 126 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 TAS2R45P59539 299 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 SNAP25P60880 206 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 LRRC26Q2I0M4 334 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 FAM229BQ4G0N7 80 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 PLCZ1Q86YW0 608 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 LFNGQ8NES3 379 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 OR2D3Q8NGH3 330 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 RNASE11Q8TAA1 199 aaKnown RBP1.11□□□□□ -2.23
SKP1-203ENST00000517625 MRPS24Q96EL2 167 aaKnown RBP1.11□□□□□ -2.23
SKP1-203ENST00000517625 TBX5Q99593 518 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 ZNF426Q9BUY5 554 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 METTL9Q9H1A3 318 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 OR51B6Q9H340 312 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 SPANXB1Q9NS25 103 aaPredicted RBP1.11□□□□□ -2.23
SKP1-203ENST00000517625 CD300AQ9UGN4 299 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 NPATQ14207 1427 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 SPTBN4Q9H254 2564 aa1.11□□□□□ -2.23
SKP1-203ENST00000517625 COL5A3P25940 1745 aaPredicted RBP1.11□□□□□ -2.23
SKP1-203ENST00000517625 LAMA2P24043 3122 aaKnown RBP1.11□□□□□ -2.23
SKP1-203ENST00000517625 ADGRB3O60242 1522 aa1.1□□□□□ -2.23
SKP1-203ENST00000517625 NBEAL2Q6ZNJ1 2754 aa1.1□□□□□ -2.23
SKP1-203ENST00000517625 SHANK3Q9BYB0 1731 aa1.1□□□□□ -2.23
SKP1-203ENST00000517625 FNDC10F2Z333 226 aa1.1□□□□□ -2.23
SKP1-203ENST00000517625 SLC17A3O00476 420 aa1.1□□□□□ -2.23
SKP1-203ENST00000517625 STX10O60499 249 aa1.1□□□□□ -2.23
SKP1-203ENST00000517625 NDUFB2O95178 105 aa1.1□□□□□ -2.23
SKP1-203ENST00000517625 PSMG1O95456 288 aa1.1□□□□□ -2.23
SKP1-203ENST00000517625 CRYBA1P05813 215 aa1.1□□□□□ -2.23
SKP1-203ENST00000517625 ESDP10768 282 aa1.1□□□□□ -2.23
SKP1-203ENST00000517625 ORM2P19652 201 aa1.1□□□□□ -2.23
SKP1-203ENST00000517625 HSPA9P38646 679 aaKnown RBP1.1□□□□□ -2.23
SKP1-203ENST00000517625 PSMD7P51665 324 aa1.1□□□□□ -2.23
SKP1-203ENST00000517625 H2BFSP57053 126 aa1.1□□□□□ -2.23
SKP1-203ENST00000517625 ACTBP60709 375 aa1.1□□□□□ -2.23
SKP1-203ENST00000517625 DYNLL1P63167 89 aaKnown RBP1.1□□□□□ -2.23
SKP1-203ENST00000517625 ACTG1P63261 375 aa1.1□□□□□ -2.23
SKP1-203ENST00000517625 PRDX4Q13162 271 aa1.1□□□□□ -2.23
SKP1-203ENST00000517625 TBC1D28Q2M2D7 210 aa1.1□□□□□ -2.23
SKP1-203ENST00000517625 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.1□□□□□ -2.23
SKP1-203ENST00000517625 BLIDQ8IZY5 108 aa1.1□□□□□ -2.23
SKP1-203ENST00000517625 OR4X1Q8NH49 305 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms