RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 PAX6P26367 422 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 CHRNA7P36544 502 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 GMPPAQ96IJ6 420 aaPredicted RBP9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 FBLN5Q9UBX5 448 aa9.34□□□□□ -0.91
PCDHGA1-202ENST00000517417 A0A087X0M5 115 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 IGKV3D-11A0A0A0MRZ8 115 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 A0A1B0GX30 115 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 ZNF737O75373 536 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 CDS2O95674 445 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 TMEM187Q14656 261 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 SNAI3Q3KNW1 292 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 PRR7Q8TB68 274 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 ZNF524Q96C55 264 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 GUCD1Q96NT3 240 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 PRSS50Q9UI38 385 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 TIMM9Q9Y5J7 89 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 DMRT1Q9Y5R6 373 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 A0A0U1RQV5 110 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 TRGC2P03986 189 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 APELAP0DMC3 54 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 G6PCP35575 357 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 RBM11P57052 281 aaKnown RBP9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 GAMTQ14353 236 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 ZNF66Q6ZN08 573 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 ZNF826PQ6ZT77 177 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 OR10S1Q8NGN2 331 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 SSMEM1Q8WWF3 244 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 RHOVQ96L33 236 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 PACRGQ96M98 296 aaPredicted RBP9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 SIRT7Q9NRC8 400 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 TRAV38-1A0A0B4J264 116 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 NPIPB13A6NJU9 1138 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 NPIPB4C9JG80 1138 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 PITX3O75364 302 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 ORM2P19652 201 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 CNN1P51911 297 aaKnown RBP9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 ZNF343Q6P1L6 599 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 INO80CQ6PI98 192 aaPredicted RBP9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 FAM214BQ7L5A3 538 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 SMDT1Q9H4I9 107 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 TRIOO75962 3097 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 TGIF2-C20orf24A0A0A6YYL0 155 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 OOEPA6NGQ2 149 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 PSG2P11465 335 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 CDX1P47902 265 aaPredicted RBP9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 CDC34P49427 236 aaPredicted RBP9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 RND3P61587 244 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 PCOLCEQ15113 449 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 BLNKQ8WV28 456 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 ATP5SQ99766 215 aa9.33□□□□□ -0.92
PCDHGA1-202ENST00000517417 PRR33A8MZF0 331 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 PTBP3O95758 552 aaKnown RBP9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 FBP1P09467 338 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 COX6A1P12074 109 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 OR5I1Q13606 314 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 TRAT1Q6PIZ9 186 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 OR4S2Q8NH73 311 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 DTD1Q8TEA8 209 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 Q96M66 194 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 HSD17B10Q99714 261 aaKnown RBP9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 ABHD14AQ9BUJ0 271 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 MYO7BQ6PIF6 2116 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 C16orf97H3BN30 126 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 RPL36A-HNRNPH2H7BZ11 118 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 DLL1O00548 723 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 QRFPP83859 136 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 IL24Q13007 206 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 TMEM241Q24JQ0 296 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 TMEM252Q8N6L7 170 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 ZNF319Q9P2F9 582 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 RNF7Q9UBF6 113 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 TUBD1Q9UJT1 453 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 ABCA4P78363 2273 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 MDKP21741 143 aaPredicted RBP9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 G0S2P27469 103 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 SUCLG1P53597 346 aaKnown RBP9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 CTAG1AP78358 180 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 GPR61Q9BZJ8 451 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 OPN3Q9H1Y3 402 aaPredicted RBP9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 RNF122Q9H9V4 155 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 IGKV1-9A0A0C4DH69 117 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 SLC31A2O15432 143 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 SCTP09683 121 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 REG1BP48304 166 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 UCP2P55851 309 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 Q56UQ5 140 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 TUBA4BQ9H853 241 aa9.32□□□□□ -0.92
PCDHGA1-202ENST00000517417 C9JQL5 133 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 SRSF10O75494 262 aaKnown RBP9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 RFPL3SP0C7P2 107 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 SP9P0CG40 484 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 KIAA1549LQ6ZVL6 1849 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 IGKV1D-8A0A087WSZ0 117 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 LNP1A1A4G5 178 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 SYNGR1O43759 233 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 PAX5Q02548 391 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 TNXAQ16473 311 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 CEACAM21Q3KPI0 293 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 SPNS3Q6ZMD2 512 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 LHFPL1Q86WI0 220 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms