RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 RAB13P51153 203 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 LOXL3P58215 753 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 DEFA1P59665 94 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 DEFA3P59666 94 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 TAGLNQ01995 201 aaKnown RBP4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 CATR1Q13166 79 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 DYRK1AQ13627 763 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 DEFB112Q30KQ8 113 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 CT45A1Q5HYN5 189 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 KLF17Q5JT82 389 aaPredicted RBP4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 MZT2BQ6NZ67 158 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 C16orf87Q6PH81 154 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 C1orf229Q6ZS94 237 aaPredicted RBP4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 SLC25A48Q6ZT89 311 aaKnown RBP4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 C9orf139Q6ZV77 190 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 LHFPL4Q7Z7J7 247 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 H1FOOQ8IZA3 346 aaPredicted RBP4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 OR8H3Q8N146 312 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 ARRDC1Q8N5I2 433 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 SIGLECL1Q8N7X8 197 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 CCDC71LQ8N9Z2 235 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 CT45A3Q8NHU0 189 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 ZFAND1Q8TCF1 268 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 GIMAP1Q8WWP7 306 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 ABHD14BQ96IU4 210 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 ADTRPQ96IZ2 230 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 TSC22D3Q99576 134 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 SSX3Q99909 188 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 PRRT1Q99946 306 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 C1RLQ9NZP8 487 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 KLK11Q9UBX7 282 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 C14orf166Q9Y224 244 aaKnown RBP4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 CR1P17927 2039 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 MALRD1Q5VYJ5 2156 aa4.43□□□□□ -1.7
SCARNA16.4-201ENST00000516956 HIVEP2P31629 2446 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 IGKV1D-8A0A087WSZ0 117 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 IGHV1-3A0A0C4DH29 117 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 IGKV1-6A0A0C4DH72 117 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 H3BUX3 64 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 HOXA3O43365 443 aaPredicted RBP4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 LANCL1O43813 399 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 PEX14O75381 377 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 FSHBP01225 129 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 PPYP01298 95 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 IGLV1-47P01700 117 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 RRASP10301 218 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 TMEM11P17152 192 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 NAT1P18440 290 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 AADACP22760 399 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 CD1BP29016 333 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 CD40LGP29965 261 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 REG1BP48304 166 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 THBS3P49746 956 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 PPP5CP53041 499 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 ZNF816Q0VGE8 651 aaPredicted RBP4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 PLGLAQ15195 96 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 LY6EQ16553 131 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 AANATQ16613 207 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 RTL8BQ17RB0 113 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 VAX1Q5SQQ9 334 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 HCP5Q6MZN7 132 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 FAM71F2Q6NXP2 309 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 Q6YL49 198 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 OVCH2Q7RTZ1 564 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 C5orf24Q7Z6I8 188 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 SLC38A6Q8IZM9 456 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 BCL6BQ8N143 479 aaPredicted RBP4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 PIP4P2Q8N4L2 257 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 TMEM86BQ8N661 226 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 ZNF645Q8N7E2 425 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 ZBTB34Q8NCN2 500 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 OR4P4Q8NGL7 312 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 OR2T10Q8NGZ9 312 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 TCTEX1D2Q8WW35 142 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 RTN4IP1Q8WWV3 396 aaPredicted RBP4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 DEDD2Q8WXF8 326 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 SNAPC3Q92966 411 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 HSD17B10Q99714 261 aaKnown RBP4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 ZNF251Q9BRH9 671 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 C7orf50Q9BRJ6 194 aaKnown RBP4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 AIFM2Q9BRQ8 373 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 CCDC32Q9BV29 185 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 SRRQ9GZT4 340 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 MEGF9Q9H1U4 602 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 KIAA1456Q9P272 454 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 COPZ2Q9P299 210 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 POMT1Q9Y6A1 747 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 V9GYH0 126 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 HIVEP1P15822 2718 aa4.42□□□□□ -1.7
SCARNA16.4-201ENST00000516956 SAA2-SAA4A0A096LPE2 208 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 PIGBOS1A0A0B4J2F0 54 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 TEX13DA0A0J9YY54 714 aaPredicted RBP4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 MDFIC2A0A1B0GVS7 189 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 ANKRD20A5PA0PJZ0 165 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 OR5H14A6NHG9 310 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 NCBP2LA6PVI3 153 aaKnown RBP4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 M0QZK8 103 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 GPR31O00270 319 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 TIMM23O14925 209 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms