RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 K7EQS6 105 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 M0R3E3 92 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 PIRO00625 290 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 NUPR1O60356 82 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 UPK1BO75841 260 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 GOSR1O95249 250 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 NPYP01303 97 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 TNFP01375 233 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 PRTN3P24158 256 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 KRT20P35900 424 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 CCT6AP40227 531 aaKnown RBP-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 MDH1P40925 334 aaKnown RBP-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 PPT1P50897 306 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 NXNL2Q5VZ03 156 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 CMTM1Q8IZ96 169 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 RPP25LQ8N5L8 163 aaKnown RBP-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 TEX9Q8N6V9 391 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 CCNYL1Q8N7R7 359 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 CCDC110Q8TBZ0 833 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 NT5MQ9NPB1 228 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 UXTQ9UBK9 157 aaPredicted RBP-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 SCML1Q9UN30 329 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 ORC6Q9Y5N6 252 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 PTPRFP10586 1907 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 MGAM2Q2M2H8 2515 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 RIF1Q5UIP0 2472 aaKnown RBP-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 IGHV1-58A0A0C4DH39 117 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 FUOMA2VDF0 154 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 C21orf140B9A014 251 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 INMT-MINDY4F8WBC2 141 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 DKC1O60832 514 aaKnown RBP eCLIP-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 ALOX12BO75342 701 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 TBCAO75347 108 aaKnown RBP-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 M6PRP20645 277 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 CCT3P49368 545 aaKnown RBP-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 RGS4P49798 205 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 RAB14P61106 215 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 GTF2BQ00403 316 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 TRAM2Q15035 370 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 ACSM3Q53FZ2 586 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 TTC32Q5I0X7 151 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 TTC23Q5W5X9 447 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 CMC1Q7Z7K0 106 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 AP1M1Q9BXS5 423 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 TTTY13Q9BZ97 58 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 PSTPIP2Q9H939 334 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 CD300AQ9UGN4 299 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 RNF11Q9Y3C5 154 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 MFHAS1Q9Y4C4 1052 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 LAMB1P07942 1786 aa-3.38□□□□□ -2.95
RNU6-539P-201ENST00000516665 VPS13BQ7Z7G8 4022 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 IGLV3-32A0A0A0MS00 114 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 M0R2T5 61 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 RAB29O14966 203 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 ARPC3O15145 178 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 EIF3HO15372 352 aaKnown RBP eCLIP-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 SCGNO76038 276 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 LSM8O95777 96 aaKnown RBP-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 MT-ATP6P00846 226 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 IQCF3P0C7M6 154 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 ALDH3A1P30838 453 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 CA5AP35218 305 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 AP1S2P56377 157 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 RBM11P57052 281 aaKnown RBP-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 IDI1Q13907 227 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 FAM74A1Q5RGS3 127 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 PRAMEF5Q5TYX0 476 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 PRAMEF6Q5VXH4 476 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 SPATA12Q7Z6I5 190 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 OR8H3Q8N146 312 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 SLC50A1Q9BRV3 221 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 SLC25A31Q9H0C2 315 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 CYP4F30PQ9H0H9 118 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 POMKQ9H5K3 350 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 UCK1Q9HA47 277 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 FUT9Q9Y231 359 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 MTORP42345 2549 aa-3.39□□□□□ -2.95
RNU6-539P-201ENST00000516665 SIPA1L1O43166 1804 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 MAST2Q6P0Q8 1798 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 A0A087WUU8 490 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 TRAV8-4A0A0B4J246 113 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 SLC9B1P1A6NJY1 282 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 OR2AT4A6NND4 320 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 POLR3GO15318 223 aaPredicted RBP-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 CCL16O15467 120 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 ZMPSTE24O75844 475 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 P01737 135 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 RAB5AP20339 215 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 TAC1P20366 129 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 NAA10P41227 235 aaPredicted RBP-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 FXYD4P59646 89 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 ACTBP60709 375 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 ACTG1P63261 375 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 PDK2Q15119 407 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 CFAP161Q6P656 301 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 IYDQ6PHW0 289 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 CERS6Q6ZMG9 384 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 IQCKQ8N0W5 287 aa-3.4□□□□□ -2.95
RNU6-539P-201ENST00000516665 JAKMIP1Q96N16 626 aaKnown RBP-3.4□□□□□ -2.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms