RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 VEGFCP49767 419 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 KRTAP10-11P60412 298 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 MRPS15P82914 257 aaKnown RBP10.72□□□□□ -0.69
TCOF1-215ENST00000515516 ZNF880Q6PDB4 577 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 LCNL1Q6ZST4 164 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 RNF152Q8N8N0 203 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 OR56B1Q8NGI3 324 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 OR5M8Q8NGP6 311 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 EDARADDQ8WWZ3 215 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 RBMXL1Q96E39 390 aaKnown RBP10.72□□□□□ -0.69
TCOF1-215ENST00000515516 RAX2Q96IS3 184 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 CNBD2Q96M20 576 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 DUX3Q96PT4 197 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 C12orf4Q9NQ89 552 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 PARP11Q9NR21 331 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 ZNF580Q9UK33 172 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 HSF4Q9ULV5 492 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 V9GY05 133 aa10.72□□□□□ -0.69
TCOF1-215ENST00000515516 A0A0A6YYD4 124 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 ERICH4A6NGS2 130 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 H7C2Y5 167 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 K7EIL1 84 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 PDCD5O14737 125 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 GSTP1P09211 210 aaKnown RBP10.71□□□□□ -0.69
TCOF1-215ENST00000515516 MC5RP33032 325 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 HLA-DRB3P79483 266 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 FABP5Q01469 135 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 EGFEM1PQ0D2K5 195 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 DCTN2Q13561 401 aaKnown RBP10.71□□□□□ -0.69
TCOF1-215ENST00000515516 PLGLAQ15195 96 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 C5orf64Q2M2E5 130 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 C2orf76Q3KRA6 126 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 IZUMO2Q6UXV1 221 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 ZNF367Q7RTV3 350 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 FAM89BQ8N5H3 189 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 NPBQ8NG41 125 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 C4orf3Q8WVX3 66 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 FAM3DQ96BQ1 224 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 RITA1Q96K30 269 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 CMSS1Q9BQ75 279 aaKnown RBP10.71□□□□□ -0.69
TCOF1-215ENST00000515516 IFI27L2Q9H2X8 130 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 OR51J1Q9H342 316 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 WSB1Q9Y6I7 421 aa10.71□□□□□ -0.69
TCOF1-215ENST00000515516 WI2-2373I1.2A0A1W2PRP0 233 aa10.7□□□□□ -0.7
TCOF1-215ENST00000515516 OR5H14A6NHG9 310 aa10.7□□□□□ -0.7
TCOF1-215ENST00000515516 ITGB1BP1O14713 200 aa10.7□□□□□ -0.7
TCOF1-215ENST00000515516 DENRO43583 198 aaKnown RBP10.7□□□□□ -0.7
TCOF1-215ENST00000515516 HLA-DRB1P01911 266 aa10.7□□□□□ -0.7
TCOF1-215ENST00000515516 CNTFRP26992 372 aa10.7□□□□□ -0.7
TCOF1-215ENST00000515516 PSMB8P28062 276 aa10.7□□□□□ -0.7
TCOF1-215ENST00000515516 CLDN12P56749 244 aa10.7□□□□□ -0.7
TCOF1-215ENST00000515516 DGCR2P98153 550 aa10.7□□□□□ -0.7
TCOF1-215ENST00000515516 CFHR3Q02985 330 aa10.7□□□□□ -0.7
TCOF1-215ENST00000515516 DEFB136Q30KP8 78 aa10.7□□□□□ -0.7
TCOF1-215ENST00000515516 RPL39P5Q59GN2 51 aa10.7□□□□□ -0.7
TCOF1-215ENST00000515516 FAM131AQ6UXB0 335 aa10.7□□□□□ -0.7
TCOF1-215ENST00000515516 ARHGAP5-AS1Q96IT6 56 aa10.7□□□□□ -0.7
TCOF1-215ENST00000515516 GFI1Q99684 422 aa10.7□□□□□ -0.7
TCOF1-215ENST00000515516 HDHD3Q9BSH5 251 aaPredicted RBP10.7□□□□□ -0.7
TCOF1-215ENST00000515516 PECRQ9BY49 303 aa10.7□□□□□ -0.7
TCOF1-215ENST00000515516 Q9N2K0 584 aa10.7□□□□□ -0.7
TCOF1-215ENST00000515516 ZNF221Q9UK13 617 aa10.7□□□□□ -0.7
TCOF1-215ENST00000515516 RAB22AQ9UL26 194 aa10.7□□□□□ -0.7
TCOF1-215ENST00000515516 TRAV41A0A0B4J266 112 aa10.69□□□□□ -0.7
TCOF1-215ENST00000515516 TRDCB7Z8K6 153 aa10.69□□□□□ -0.7
TCOF1-215ENST00000515516 ATP6V0E1O15342 81 aa10.69□□□□□ -0.7
TCOF1-215ENST00000515516 RBBP9O75884 186 aa10.69□□□□□ -0.7
TCOF1-215ENST00000515516 CD3GP09693 182 aa10.69□□□□□ -0.7
TCOF1-215ENST00000515516 CT45A6P0DMU7 189 aa10.69□□□□□ -0.7
TCOF1-215ENST00000515516 CT45A5P0DMU8 189 aa10.69□□□□□ -0.7
TCOF1-215ENST00000515516 CT45A7P0DMV0 189 aa10.69□□□□□ -0.7
TCOF1-215ENST00000515516 MYL9P24844 172 aa10.69□□□□□ -0.7
TCOF1-215ENST00000515516 TBCEQ15813 527 aaPredicted RBP10.69□□□□□ -0.7
TCOF1-215ENST00000515516 C9orf66Q5T8R8 295 aa10.69□□□□□ -0.7
TCOF1-215ENST00000515516 HES5Q5TA89 166 aa10.69□□□□□ -0.7
TCOF1-215ENST00000515516 ABHD5Q8WTS1 349 aa10.69□□□□□ -0.7
TCOF1-215ENST00000515516 ABHD14BQ96IU4 210 aa10.69□□□□□ -0.7
TCOF1-215ENST00000515516 C11orf54Q9H0W9 315 aaPredicted RBP10.69□□□□□ -0.7
TCOF1-215ENST00000515516 OR1A1Q9P1Q5 309 aa10.69□□□□□ -0.7
TCOF1-215ENST00000515516 VSIG4Q9Y279 399 aa10.69□□□□□ -0.7
TCOF1-215ENST00000515516 WASHC3Q9Y3C0 194 aa10.69□□□□□ -0.7
TCOF1-215ENST00000515516 IGHV7-81A0A0B4J1V7 117 aa10.68□□□□□ -0.7
TCOF1-215ENST00000515516 G3V318 75 aa10.68□□□□□ -0.7
TCOF1-215ENST00000515516 RRHO14718 337 aa10.68□□□□□ -0.7
TCOF1-215ENST00000515516 RAMP3O60896 148 aa10.68□□□□□ -0.7
TCOF1-215ENST00000515516 NDUFA3O95167 84 aa10.68□□□□□ -0.7
TCOF1-215ENST00000515516 SCTP09683 121 aa10.68□□□□□ -0.7
TCOF1-215ENST00000515516 GADD45AP24522 165 aa10.68□□□□□ -0.7
TCOF1-215ENST00000515516 TMEM50BP56557 158 aa10.68□□□□□ -0.7
TCOF1-215ENST00000515516 TMEM267Q0VDI3 215 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-215ENST00000515516 ZNF660Q6AZW8 331 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-215ENST00000515516 GLDNQ6ZMI3 551 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-215ENST00000515516 OR11H1Q8NG94 326 aa10.68□□□□□ -0.7
TCOF1-215ENST00000515516 RAB3CQ96E17 227 aa10.68□□□□□ -0.7
TCOF1-215ENST00000515516 UBE2E2Q96LR5 201 aa10.68□□□□□ -0.7
TCOF1-215ENST00000515516 RNF5Q99942 180 aa10.68□□□□□ -0.7
TCOF1-215ENST00000515516 RNF150Q9ULK6 438 aa10.68□□□□□ -0.7
TCOF1-215ENST00000515516 RAB26Q9ULW5 256 aa10.68□□□□□ -0.7
TCOF1-215ENST00000515516 TRAV1-2A0A0B4J238 106 aa10.67□□□□□ -0.7
TCOF1-215ENST00000515516 TMEM272A0A1B0GTI8 110 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms