RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 CD300EQ496F6 205 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 GALNT16Q8N428 558 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 SLAMF6Q96DU3 332 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 CABLES2Q9BTV7 478 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 ABHD6Q9BV23 337 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 PLK3Q9H4B4 646 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 RALYQ9UKM9 306 aaKnown RBP6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 COA3Q9Y2R0 106 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 GRNP28799 593 aaKnown RBP6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 CD34P28906 385 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 TSPOP30536 169 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 LCN10Q6JVE6 187 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 GUSBP11Q6P575 273 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 ANKRD16Q6P6B7 361 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 FNDC9Q8TBE3 224 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 FGGYQ96C11 551 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 BTF3L4Q96K17 158 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 NAA38Q9BRA0 125 aaKnown RBP6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 ZNF703Q9H7S9 590 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 SRD5A3Q9H8P0 318 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 APMAPQ9HDC9 416 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 ERG28Q9UKR5 140 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 MRPS16Q9Y3D3 137 aaKnown RBP6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 CSAG2Q9Y5P2 127 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 LOC101059948A0A1B0GTJ6 334 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 IGLC7A0M8Q6 106 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 FAM166BA8MTA8 275 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 XRCC2O43543 280 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 TTRP02766 147 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 KLK2P20151 261 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 CCKBRP32239 447 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 FOXF1Q12946 379 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 EIF2B1Q14232 305 aaKnown RBP6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 SLC18B1Q6NT16 456 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 LYPD6Q86Y78 171 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 OR52N5Q8NH56 324 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 NEU4Q8WWR8 484 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 ST8SIA1Q92185 356 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 TVP23CQ96ET8 276 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 ULBP2Q9BZM5 246 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 TAF9BQ9HBM6 251 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 TRAV18A0A075B6X5 111 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 A0A1B0GV50 99 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 CLDN34H7C241 214 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 CD99P14209 185 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 GUCA1AP43080 201 aaPredicted RBP6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 NRN1LQ496H8 165 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 FAM78BQ5VT40 261 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 NECAP1Q8NC96 275 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 STARD4Q96DR4 205 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 ANAPC13Q9BS18 74 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 NIPSNAP3BQ9BS92 247 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 CHST6Q9GZX3 395 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 FSCN3Q9NQT6 498 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 FBLN5Q9UBX5 448 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 PTRH2Q9Y3E5 179 aaKnown RBP6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 IGHV5-10-1A0A0J9YXX1 117 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 NPIPB13A6NJU9 1138 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 NPIPB4C9JG80 1138 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 AREGP15514 252 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 FSTP19883 344 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 GNB2P62879 340 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 RAB32Q13637 225 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 ZNF295-AS1Q8N0V1 137 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 KLHDC1Q8N7A1 406 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 GPR82Q96P67 336 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 NDFIP1Q9BT67 221 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 SERTAD4Q9NUC0 356 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 MBNL3Q9NUK0 354 aaKnown RBP6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 MED29Q9NX70 200 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 KLHL13Q9P2N7 655 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 GPR132Q9UNW8 380 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 VDAC3Q9Y277 283 aa6.4□□□□□ -1.38
PDLIM5-219ENST00000514743 TRBV24-1A0A075B6N3 115 aa6.4□□□□□ -1.39
PDLIM5-219ENST00000514743 A0A1W2PR80 420 aa6.4□□□□□ -1.39
PDLIM5-219ENST00000514743 NPIPB5A8MRT5 1133 aa6.4□□□□□ -1.39
PDLIM5-219ENST00000514743 RAB27BO00194 218 aa6.4□□□□□ -1.39
PDLIM5-219ENST00000514743 SLC17A2O00624 439 aa6.4□□□□□ -1.39
PDLIM5-219ENST00000514743 TNFRSF13BO14836 293 aaPredicted RBP6.4□□□□□ -1.39
PDLIM5-219ENST00000514743 LMX1BO60663 402 aa6.4□□□□□ -1.39
PDLIM5-219ENST00000514743 SCRG1O75711 98 aa6.4□□□□□ -1.39
PDLIM5-219ENST00000514743 SERPINE2P07093 398 aa6.4□□□□□ -1.39
PDLIM5-219ENST00000514743 APOBEC1P41238 236 aaKnown RBP6.4□□□□□ -1.39
PDLIM5-219ENST00000514743 ZFP36L1Q07352 338 aaKnown RBP6.4□□□□□ -1.39
PDLIM5-219ENST00000514743 H1FNTQ75WM6 255 aaPredicted RBP6.4□□□□□ -1.39
PDLIM5-219ENST00000514743 NEGR1Q7Z3B1 354 aa6.4□□□□□ -1.39
PDLIM5-219ENST00000514743 ZNF429Q86V71 674 aa6.4□□□□□ -1.39
PDLIM5-219ENST00000514743 OR4C16Q8NGL9 310 aa6.4□□□□□ -1.39
PDLIM5-219ENST00000514743 SRSF8Q9BRL6 282 aaKnown RBP6.4□□□□□ -1.39
PDLIM5-219ENST00000514743 MTFP1Q9UDX5 166 aa6.4□□□□□ -1.39
PDLIM5-219ENST00000514743 LAMP3Q9UQV4 416 aa6.4□□□□□ -1.39
PDLIM5-219ENST00000514743 SELENOKQ9Y6D0 94 aa6.4□□□□□ -1.39
PDLIM5-219ENST00000514743 ZNF850A8MQ14 1090 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 EEF1E1-BLOC1S5C9J1V9 151 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 ST8SIA3O43173 380 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 PMS2P2O95744 297 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 CXCL12P48061 93 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 SLC25A53Q5H9E4 307 aa6.39□□□□□ -1.39
PDLIM5-219ENST00000514743 ZNF880Q6PDB4 577 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms