RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 LOC102724200A0A096LPH7 203 aaPredicted RBP3.1□□□□□ -1.91
RFC1-216ENST00000514572 IGHV1-3A0A0C4DH29 117 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 PRAMEF26H0Y7S4 382 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 J3QLI3 93 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 UBDO15205 165 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 TOX3O15405 576 aaPredicted RBP3.1□□□□□ -1.91
RFC1-216ENST00000514572 FABP7O15540 132 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 MYO1DO94832 1006 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 LIMS3P0CW19 117 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 LIMS4P0CW20 117 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 EMP2P54851 167 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 PLTPP55058 493 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 MYL6P60660 151 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 EIF3IQ13347 325 aaKnown RBP3.1□□□□□ -1.91
RFC1-216ENST00000514572 TMEM215Q68D42 235 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 CLEC20AQ6ZU45 233 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 ORMDL3Q8N138 153 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 CYP4Z2PQ8N1L4 340 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 SLC35G3Q8N808 338 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 ZNF555Q8NEP9 628 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 ORAOV1Q8WV07 137 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 NELFBQ8WX92 580 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 FAM210AQ96ND0 272 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 SUCNR1Q9BXA5 334 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 ZSCAN16Q9H4T2 348 aaPredicted RBP3.1□□□□□ -1.91
RFC1-216ENST00000514572 IMP3Q9NV31 184 aaKnown RBP3.1□□□□□ -1.91
RFC1-216ENST00000514572 TAS2R5Q9NYW4 299 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 RBM12B-AS1Q9P1G2 102 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 FBXL3Q9UKT7 428 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 RAB22AQ9UL26 194 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 CBY1Q9Y3M2 126 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 SCN8AQ9UQD0 1980 aa3.1□□□□□ -1.91
RFC1-216ENST00000514572 ZFC3H1O60293 1989 aaKnown RBP3.09□□□□□ -1.91
RFC1-216ENST00000514572 DCHS2Q6V1P9 2916 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 A0A0G2JMP0 313 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 A0A0X1KG70 313 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 KLRC4-KLRK1H3BQV0 150 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 UPK2O00526 184 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 TNFSF15O95150 251 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 CYB5R3P00387 301 aaPredicted RBP3.09□□□□□ -1.91
RFC1-216ENST00000514572 CDK1P06493 297 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 CECR9P0C854 216 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 MUC1P15941 1255 aaPredicted RBP3.09□□□□□ -1.91
RFC1-216ENST00000514572 M6PRP20645 277 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 PSMD8P48556 350 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 TAS2R43P59537 309 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 ZNF816Q0VGE8 651 aaPredicted RBP3.09□□□□□ -1.91
RFC1-216ENST00000514572 COTL1Q14019 142 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 PTGES3Q15185 160 aaKnown RBP3.09□□□□□ -1.91
RFC1-216ENST00000514572 MAPRE2Q15555 327 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 SP6Q3SY56 376 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 LUZP6Q538Z0 58 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 LINC00483Q53H64 154 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 C9orf64Q5T6V5 341 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 FAM222AQ5U5X8 452 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 NIPAL1Q6NVV3 410 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 FAM9CQ8IZT9 166 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 SLC25A45Q8N413 288 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 C12orf29Q8N999 325 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 OR2Z1Q8NG97 314 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 OR52N1Q8NH53 320 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 SYNPRQ8TBG9 265 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 FAM57AQ8TBR7 257 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 FRZBQ92765 325 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 FMC1Q96HJ9 113 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 MRPL20Q9BYC9 149 aaKnown RBP3.09□□□□□ -1.91
RFC1-216ENST00000514572 TBL1XR1Q9BZK7 514 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 HDHD2Q9H0R4 259 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 DSN1Q9H410 356 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 RHOFQ9HBH0 211 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 DIABLOQ9NR28 239 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 STOML2Q9UJZ1 356 aa3.09□□□□□ -1.91
RFC1-216ENST00000514572 ARID1AO14497 2285 aa3.09□□□□□ -1.92
RFC1-216ENST00000514572 MDC1Q14676 2089 aaKnown RBP3.08□□□□□ -1.92
RFC1-216ENST00000514572 ZGRF1Q86YA3 2104 aa3.08□□□□□ -1.92
RFC1-216ENST00000514572 LOC389332A0A1B0GUA5 103 aa3.08□□□□□ -1.92
RFC1-216ENST00000514572 LGALS9O00182 355 aa3.08□□□□□ -1.92
RFC1-216ENST00000514572 BET1O15155 118 aa3.08□□□□□ -1.92
RFC1-216ENST00000514572 SLC31A1O15431 190 aa3.08□□□□□ -1.92
RFC1-216ENST00000514572 AQP9O43315 295 aa3.08□□□□□ -1.92
RFC1-216ENST00000514572 FGF16O43320 207 aa3.08□□□□□ -1.92
RFC1-216ENST00000514572 SYNGR1O43759 233 aa3.08□□□□□ -1.92
RFC1-216ENST00000514572 MPZL2O60487 215 aa3.08□□□□□ -1.92
RFC1-216ENST00000514572 MED6O75586 246 aa3.08□□□□□ -1.92
RFC1-216ENST00000514572 ASS1P00966 412 aaKnown RBP3.08□□□□□ -1.92
RFC1-216ENST00000514572 TPM3P06753 285 aa3.08□□□□□ -1.92
RFC1-216ENST00000514572 MRPL3P09001 348 aaKnown RBP3.08□□□□□ -1.92
RFC1-216ENST00000514572 IL1RNP18510 177 aa3.08□□□□□ -1.92
RFC1-216ENST00000514572 TPM4P67936 248 aa3.08□□□□□ -1.92
RFC1-216ENST00000514572 MEF2CQ06413 473 aaPredicted RBP3.08□□□□□ -1.92
RFC1-216ENST00000514572 EBI3Q14213 229 aa3.08□□□□□ -1.92
RFC1-216ENST00000514572 PIGHQ14442 188 aaPredicted RBP3.08□□□□□ -1.92
RFC1-216ENST00000514572 ATP6AP1LQ52LC2 224 aa3.08□□□□□ -1.92
RFC1-216ENST00000514572 HSP90B2PQ58FF3 399 aa3.08□□□□□ -1.92
RFC1-216ENST00000514572 LAMTOR1Q6IAA8 161 aa3.08□□□□□ -1.92
RFC1-216ENST00000514572 FAM71E1Q6IPT2 247 aa3.08□□□□□ -1.92
RFC1-216ENST00000514572 FAM231DQ6ZW35 169 aa3.08□□□□□ -1.92
RFC1-216ENST00000514572 STK40Q8N2I9 435 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms