RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 EIF5AP63241 154 aaKnown RBP12.41□□□□□ -0.42
VCAN-211ENST00000513984 CATR1Q13166 79 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 CDSNQ15517 529 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 C1orf87Q8N0U7 546 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 GPR146Q96CH1 333 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 YPEL2Q96QA6 119 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 RAB9BQ9NP90 201 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 FAM212BQ9NTI7 297 aaPredicted RBP12.41□□□□□ -0.42
VCAN-211ENST00000513984 CALYQ9NYX4 217 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 RNF115Q9Y4L5 304 aa12.41□□□□□ -0.42
VCAN-211ENST00000513984 YLPM1P49750 1951 aaKnown RBP12.4□□□□□ -0.42
VCAN-211ENST00000513984 TRAV38-1A0A0B4J264 116 aa12.4□□□□□ -0.42
VCAN-211ENST00000513984 B9A039 149 aa12.4□□□□□ -0.42
VCAN-211ENST00000513984 IGKV1-5P01602 117 aa12.4□□□□□ -0.42
VCAN-211ENST00000513984 MMP9P14780 707 aa12.4□□□□□ -0.42
VCAN-211ENST00000513984 ZNF16P17020 682 aaPredicted RBP12.4□□□□□ -0.42
VCAN-211ENST00000513984 POLR2GP62487 172 aaKnown RBP eCLIP12.4□□□□□ -0.42
VCAN-211ENST00000513984 MST1LQ2TV78 715 aa12.4□□□□□ -0.42
VCAN-211ENST00000513984 MORN2Q502X0 79 aa12.4□□□□□ -0.42
VCAN-211ENST00000513984 CXorf66Q5JRM2 361 aaPredicted RBP12.4□□□□□ -0.42
VCAN-211ENST00000513984 FAM216BQ8N7L0 139 aa12.4□□□□□ -0.42
VCAN-211ENST00000513984 TCTEX1D1Q8N7M0 179 aa12.4□□□□□ -0.42
VCAN-211ENST00000513984 CCL13Q99616 98 aa12.4□□□□□ -0.42
VCAN-211ENST00000513984 MS4A5Q9H3V2 200 aa12.4□□□□□ -0.42
VCAN-211ENST00000513984 DYNLRB1Q9NP97 96 aa12.4□□□□□ -0.42
VCAN-211ENST00000513984 PSG11Q9UQ72 335 aa12.4□□□□□ -0.42
VCAN-211ENST00000513984 TMEM8BA6NDV4 472 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 NKX6-3A6NJ46 265 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 DEFB108AA8MXU0 73 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 TMEM178BH3BS89 294 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 ST8SIA5O15466 376 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 SIAH2O43255 324 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 PVALBP20472 110 aaPredicted RBP12.39□□□□□ -0.43
VCAN-211ENST00000513984 RPL30P62888 115 aaKnown RBP12.39□□□□□ -0.43
VCAN-211ENST00000513984 C17orf58Q2M2W7 97 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 RPL7L1Q6DKI1 246 aaKnown RBP12.39□□□□□ -0.43
VCAN-211ENST00000513984 ZNF66Q6ZN08 573 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 ZNF808Q8N4W9 903 aaPredicted RBP12.39□□□□□ -0.43
VCAN-211ENST00000513984 CA5BP1Q8WTZ4 195 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 REG4Q9BYZ8 158 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 SDHAF2Q9NX18 166 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 GNG12Q9UBI6 72 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 ITGB1BP1O14713 200 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 JTBO76095 146 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 PLAUP00749 431 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 AKR1C2P52895 323 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 AANATQ16613 207 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 LTC4SQ16873 150 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 TCF23Q7RTU1 214 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 OR2C3Q8N628 320 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 RNASE11Q8TAA1 199 aaKnown RBP12.39□□□□□ -0.43
VCAN-211ENST00000513984 LRRC20Q8TCA0 184 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 MARVELD3Q96A59 401 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 HSD17B10Q99714 261 aaKnown RBP12.39□□□□□ -0.43
VCAN-211ENST00000513984 BARX1Q9HBU1 254 aaPredicted RBP12.39□□□□□ -0.43
VCAN-211ENST00000513984 KCNJ16Q9NPI9 418 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 PFDN2Q9UHV9 154 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 HIVEP3Q5T1R4 2406 aa12.39□□□□□ -0.43
VCAN-211ENST00000513984 TRGV10A0A0A0MS01 117 aa12.38□□□□□ -0.43
VCAN-211ENST00000513984 KBTBD11-OT1A0A1B0GTJ5 212 aa12.38□□□□□ -0.43
VCAN-211ENST00000513984 MFSD2BA6NFX1 497 aa12.38□□□□□ -0.43
VCAN-211ENST00000513984 KIAA1324LA8MWY0 1029 aaPredicted RBP12.38□□□□□ -0.43
VCAN-211ENST00000513984 FGF16O43320 207 aa12.38□□□□□ -0.43
VCAN-211ENST00000513984 SSSCA1O60232 199 aa12.38□□□□□ -0.43
VCAN-211ENST00000513984 EPHA1P21709 976 aa12.38□□□□□ -0.43
VCAN-211ENST00000513984 LPAR6P43657 344 aa12.38□□□□□ -0.43
VCAN-211ENST00000513984 Q6ZRM9 215 aa12.38□□□□□ -0.43
VCAN-211ENST00000513984 CORO2AQ92828 525 aa12.38□□□□□ -0.43
VCAN-211ENST00000513984 LINC00574Q9H8X3 128 aa12.38□□□□□ -0.43
VCAN-211ENST00000513984 LYRM2Q9NU23 88 aaPredicted RBP12.38□□□□□ -0.43
VCAN-211ENST00000513984 TMEM106BQ9NUM4 274 aa12.38□□□□□ -0.43
VCAN-211ENST00000513984 CISD1Q9NZ45 108 aaKnown RBP12.38□□□□□ -0.43
VCAN-211ENST00000513984 CLN8Q9UBY8 286 aa12.38□□□□□ -0.43
VCAN-211ENST00000513984 PPIAL4EA0A075B759 164 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 PPIAL4DF5H284 164 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 CLDN1O95832 211 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 PPIAL4FP0DN26 164 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 LOXP28300 417 aaPredicted RBP12.37□□□□□ -0.43
VCAN-211ENST00000513984 BRWD1-AS2P59051 145 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 EWSR1Q01844 656 aaKnown RBP eCLIP12.37□□□□□ -0.43
VCAN-211ENST00000513984 TFF3Q07654 80 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 SWI5Q1ZZU3 235 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 Q3ZCU0 254 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 TOR2AQ5JU69 321 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 BTNL3Q6UXE8 466 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 UBAC2Q8NBM4 344 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 TCTEX1D2Q8WW35 142 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 TMED6Q8WW62 240 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 BSCL2Q96G97 398 aaPredicted RBP12.37□□□□□ -0.43
VCAN-211ENST00000513984 MAGT1Q9H0U3 335 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 CACNG5Q9UF02 275 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 PPIAL4AQ9Y536 164 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 ZNF729A6NN14 1252 aaPredicted RBP12.37□□□□□ -0.43
VCAN-211ENST00000513984 TMPRSS2O15393 492 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 RAMP3O60896 148 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 OMGP23515 440 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 GPR12P47775 334 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 TMEM30BQ3MIR4 351 aa12.37□□□□□ -0.43
VCAN-211ENST00000513984 ZNF672Q499Z4 452 aaPredicted RBP12.37□□□□□ -0.43
VCAN-211ENST00000513984 FGFRL1Q8N441 504 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms