RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 HMGN3Q15651 99 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 RAB11BQ15907 218 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 FAM27D1Q5T7N8 215 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 ZNF660Q6AZW8 331 aaPredicted RBP5.73□□□□□ -1.49
HTT-212ENST00000513639 OR10K2Q6IF99 312 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 FAM53AQ6NSI3 398 aaPredicted RBP5.73□□□□□ -1.49
HTT-212ENST00000513639 LCNL1Q6ZST4 164 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 ZNF833PQ6ZTB9 187 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 PRSS48Q7RTY5 328 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 NPBQ8NG41 125 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 OR56B1Q8NGI3 324 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 OR5M8Q8NGP6 311 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 SETD6Q8TBK2 473 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 EDARADDQ8WWZ3 215 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 RAX2Q96IS3 184 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 UBE2E2Q96LR5 201 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 KCTD7Q96MP8 289 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 NABP2Q9BQ15 211 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 CCDC90BQ9GZT6 254 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 OR51J1Q9H342 316 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 NKX1-2Q9UD57 310 aaPredicted RBP5.73□□□□□ -1.49
HTT-212ENST00000513639 RAB22AQ9UL26 194 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 BLOC1S6Q9UL45 172 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 VSIG4Q9Y279 399 aa5.73□□□□□ -1.49
HTT-212ENST00000513639 OR5H14A6NHG9 310 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 ANKRD65E5RJM6 399 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 PDCD5O14737 125 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 NBR2O15453 112 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 HLA-DRB1P01911 266 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 CALRP27797 417 aaKnown RBP5.72□□□□□ -1.49
HTT-212ENST00000513639 PSMB8P28062 276 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 OR3A3P47888 321 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 SERPINB10P48595 397 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 INSL3P51460 131 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 RAB25P57735 213 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 KRTAP10-11P60412 298 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 MLLT11Q13015 90 aaPredicted RBP5.72□□□□□ -1.49
HTT-212ENST00000513639 UNC119Q13432 240 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 C5orf64Q2M2E5 130 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 C2orf76Q3KRA6 126 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 ZNF880Q6PDB4 577 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 ETV3LQ6ZN32 361 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 TMEM91Q6ZNR0 172 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 ODF3L1Q8IXM7 274 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 TCTEX1D1Q8N7M0 179 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 C4orf3Q8WVX3 66 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 PTX4Q96A99 478 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 FAM3DQ96BQ1 224 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 MGLLQ99685 303 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 ANKRD60Q9BZ19 345 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 LPAR5Q9H1C0 372 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 ZNF221Q9UK13 617 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 RNF150Q9ULK6 438 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 AK6Q9Y3D8 172 aaKnown RBP5.72□□□□□ -1.49
HTT-212ENST00000513639 V9GY05 133 aa5.72□□□□□ -1.49
HTT-212ENST00000513639 SAA2-SAA4A0A096LPE2 208 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 TRAV1-2A0A0B4J238 106 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 TRAV41A0A0B4J266 112 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 WI2-2373I1.2A0A1W2PRP0 233 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 METTL21EPA6NDL7 271 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 TRDCB7Z8K6 153 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 H7C2Y5 167 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 K7EIL1 84 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 EREGO14944 169 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 ARPC1BO15143 372 aaKnown RBP5.71□□□□□ -1.5
HTT-212ENST00000513639 SOCS1O15524 211 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 DENRO43583 198 aaKnown RBP5.71□□□□□ -1.5
HTT-212ENST00000513639 IGLV1-40P01703 118 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 OR8U8P0C7N1 319 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 NHLRC4P0CG21 123 aaPredicted RBP5.71□□□□□ -1.5
HTT-212ENST00000513639 SAA2P0DJI9 122 aaPredicted RBP5.71□□□□□ -1.5
HTT-212ENST00000513639 CT45A6P0DMU7 189 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 CT45A5P0DMU8 189 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 CT45A7P0DMV0 189 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 SLC2A2P11168 524 aaPredicted RBP5.71□□□□□ -1.5
HTT-212ENST00000513639 CRHBPP24387 322 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 PPIFP30405 207 aaKnown RBP5.71□□□□□ -1.5
HTT-212ENST00000513639 HOXD3P31249 432 aaPredicted RBP5.71□□□□□ -1.5
HTT-212ENST00000513639 VEGFCP49767 419 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 RAB9AP51151 201 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 AQP4P55087 323 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 RUNX1Q01196 453 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 CFHR3Q02985 330 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 CD69Q07108 199 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 GNMTQ14749 295 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 ARL6IP1Q15041 203 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 PLGLAQ15195 96 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 P2RY14Q15391 338 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 AKIRIN2Q53H80 203 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 VAX1Q5SQQ9 334 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 C9orf66Q5T8R8 295 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 PYHIN1Q6K0P9 492 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 ZNF562Q6V9R5 426 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 SVOPQ8N4V2 548 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 MINDY2Q8NBR6 621 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 OR11H1Q8NG94 326 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 OR5AN1Q8NGI8 311 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 OR1N2Q8NGR9 330 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 NRG4Q8WWG1 115 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 RITA1Q96K30 269 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms