RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 OR5AK2Q8NH90 309 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 NSL1Q96IY1 281 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 YPEL2Q96QA6 119 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 PDCD1LG2Q9BQ51 273 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 GABARAPL1Q9H0R8 117 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 PEMTQ9UBM1 199 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 METTL1Q9UBP6 276 aaKnown RBP8.23□□□□□ -1.09
DDX41-216ENST00000513562 TNCP24821 2201 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 DNAH2Q9P225 4427 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 A0A0J9YWU9 116 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 G3V2T6 193 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 SLC22A1O15245 554 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 CA11O75493 328 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 GSTP1P09211 210 aaKnown RBP8.22□□□□□ -1.09
DDX41-216ENST00000513562 ATF4P18848 351 aaPredicted RBP8.22□□□□□ -1.09
DDX41-216ENST00000513562 CALB2P22676 271 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 ZNF93P35789 620 aaPredicted RBP8.22□□□□□ -1.09
DDX41-216ENST00000513562 TNFRSF9Q07011 255 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 FLOT2Q14254 428 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 PSG5Q15238 335 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 RPEL1Q2QD12 228 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 SLC22A6Q4U2R8 563 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 DDI2Q5TDH0 399 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 RAB12Q6IQ22 244 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 C5orf24Q7Z6I8 188 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 SYS1Q8N2H4 156 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 OR5T1Q8NG75 326 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 OR2AK2Q8NG84 335 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 GRPEL2Q8TAA5 225 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 GHSRQ92847 366 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 KCTD12Q96CX2 325 aaKnown RBP8.22□□□□□ -1.09
DDX41-216ENST00000513562 S100A13Q99584 98 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 CIB1Q99828 191 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 RNF5Q99942 180 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 GABARAPL3Q9BY60 117 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 TMEM138Q9NPI0 162 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 ZC4H2Q9NQZ6 224 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 PKHD1P08F94 4074 aa8.22□□□□□ -1.09
DDX41-216ENST00000513562 E9PI62 339 aa8.21□□□□□ -1.1
DDX41-216ENST00000513562 NDUFB8O95169 186 aa8.21□□□□□ -1.1
DDX41-216ENST00000513562 SPDEFO95238 335 aa8.21□□□□□ -1.1
DDX41-216ENST00000513562 MAS1P04201 325 aa8.21□□□□□ -1.1
DDX41-216ENST00000513562 MC5RP33032 325 aa8.21□□□□□ -1.1
DDX41-216ENST00000513562 SOX2P48431 317 aa8.21□□□□□ -1.1
DDX41-216ENST00000513562 SSBP2P81877 361 aaPredicted RBP8.21□□□□□ -1.1
DDX41-216ENST00000513562 DEFA5Q01523 94 aa8.21□□□□□ -1.1
DDX41-216ENST00000513562 FXYD3Q14802 87 aa8.21□□□□□ -1.1
DDX41-216ENST00000513562 RPL39P5Q59GN2 51 aa8.21□□□□□ -1.1
DDX41-216ENST00000513562 DMKNQ6E0U4 476 aaPredicted RBP8.21□□□□□ -1.1
DDX41-216ENST00000513562 GLDNQ6ZMI3 551 aaPredicted RBP8.21□□□□□ -1.1
DDX41-216ENST00000513562 WFDC3Q8IUB2 231 aa8.21□□□□□ -1.1
DDX41-216ENST00000513562 BVESQ8NE79 360 aa8.21□□□□□ -1.1
DDX41-216ENST00000513562 OR5AN1Q8NGI8 311 aa8.21□□□□□ -1.1
DDX41-216ENST00000513562 MRPL48Q96GC5 212 aaKnown RBP8.21□□□□□ -1.1
DDX41-216ENST00000513562 THTPAQ9BU02 230 aa8.21□□□□□ -1.1
DDX41-216ENST00000513562 ALG8Q9BVK2 526 aa8.21□□□□□ -1.1
DDX41-216ENST00000513562 GGTLC1Q9BX51 225 aa8.21□□□□□ -1.1
DDX41-216ENST00000513562 TINAGL1Q9GZM7 467 aaPredicted RBP8.21□□□□□ -1.1
DDX41-216ENST00000513562 ISG20L2Q9H9L3 353 aaKnown RBP8.21□□□□□ -1.1
DDX41-216ENST00000513562 MED4Q9NPJ6 270 aa8.21□□□□□ -1.1
DDX41-216ENST00000513562 KCNIP1Q9NZI2 227 aa8.21□□□□□ -1.1
DDX41-216ENST00000513562 PIPOXQ9P0Z9 390 aa8.21□□□□□ -1.1
DDX41-216ENST00000513562 WASHC3Q9Y3C0 194 aa8.21□□□□□ -1.1
DDX41-216ENST00000513562 PEX16Q9Y5Y5 336 aa8.21□□□□□ -1.1
DDX41-216ENST00000513562 DYNC1H1Q14204 4646 aaKnown RBP8.21□□□□□ -1.1
DDX41-216ENST00000513562 H7C2Y5 167 aa8.2□□□□□ -1.1
DDX41-216ENST00000513562 RAB29O14966 203 aa8.2□□□□□ -1.1
DDX41-216ENST00000513562 ST8SIA5O15466 376 aa8.2□□□□□ -1.1
DDX41-216ENST00000513562 T-ENOLP0DO92 83 aa8.2□□□□□ -1.1
DDX41-216ENST00000513562 PPP3R1P63098 170 aa8.2□□□□□ -1.1
DDX41-216ENST00000513562 MRPL28Q13084 256 aaKnown RBP8.2□□□□□ -1.1
DDX41-216ENST00000513562 DEFB114Q30KQ6 69 aa8.2□□□□□ -1.1
DDX41-216ENST00000513562 LYG2Q86SG7 212 aa8.2□□□□□ -1.1
DDX41-216ENST00000513562 ZDHHC13Q8IUH4 622 aa8.2□□□□□ -1.1
DDX41-216ENST00000513562 MRPL30Q8TCC3 161 aaKnown RBP8.2□□□□□ -1.1
DDX41-216ENST00000513562 DYNLRB2Q8TF09 96 aa8.2□□□□□ -1.1
DDX41-216ENST00000513562 SNAPC3Q92966 411 aa8.2□□□□□ -1.1
DDX41-216ENST00000513562 USMG5Q96IX5 58 aa8.2□□□□□ -1.1
DDX41-216ENST00000513562 CYYR1Q96J86 154 aa8.2□□□□□ -1.1
DDX41-216ENST00000513562 EXOGQ9Y2C4 368 aaKnown RBP8.2□□□□□ -1.1
DDX41-216ENST00000513562 DNAH11Q96DT5 4516 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 LOC102724200A0A096LPH7 203 aaPredicted RBP8.19□□□□□ -1.1
DDX41-216ENST00000513562 A0A0B4J203 849 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 MSGN1A6NI15 193 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 FAM90A7PA6NKC0 464 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 FAM90A23PA8MXZ1 464 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 BMPR1BO00238 502 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 RBMXL2O75526 392 aaKnown RBP8.19□□□□□ -1.1
DDX41-216ENST00000513562 GLAP06280 429 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 CD2P06729 351 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 BDKRB2P30411 391 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 GPR176Q14439 515 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 ATP6AP1Q15904 470 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 GUCA2BQ16661 112 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 SLC25A30Q5SVS4 291 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 C6orf141Q5SZD1 244 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 SLC16A13Q7RTY0 426 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 LHFPL3Q86UP9 236 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 GPR148Q8TDV2 347 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 TRUB1Q8WWH5 349 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms