RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 DLGAP1O14490 977 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 XRCC3O43542 346 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 GADD45GO95257 159 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 MOSP00540 346 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 HSPB1P04792 205 aaKnown RBP3.55□□□□□ -1.84
HTT-211ENST00000513326 MRPL3P09001 348 aaKnown RBP3.55□□□□□ -1.84
HTT-211ENST00000513326 IGHV3-43DP0DP04 118 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 ALOX5APP20292 161 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 FASP25445 335 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 HTR1FP30939 366 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 RRM2P31350 389 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 MC5RP33032 325 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 CHRNA7P36544 502 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 SYNJ2BPP57105 145 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 SCN1BQ07699 218 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 ZNF146Q15072 292 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 ODF4Q2M2E3 257 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 SLX4IPQ5VYV7 408 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 LYG2Q86SG7 212 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 GTSCR1Q86UQ5 136 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.55□□□□□ -1.84
HTT-211ENST00000513326 PGAM4Q8N0Y7 254 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 FAM58AQ8N1B3 248 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 MAPKAPK5-AS1Q8N8E1 139 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 OR52L1Q8NGH7 329 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 OR9G4Q8NGQ1 327 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 OR10X1Q8NGY0 326 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 PLPPR1Q8TBJ4 325 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 GNPDA2Q8TDQ7 276 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 PHLDA1Q8WV24 401 aaPredicted RBP3.55□□□□□ -1.84
HTT-211ENST00000513326 RTN4IP1Q8WWV3 396 aaPredicted RBP3.55□□□□□ -1.84
HTT-211ENST00000513326 SPACA5Q96QH8 159 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 MBOAT4Q96T53 435 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 FAM103A1Q9BTL3 118 aaKnown RBP3.55□□□□□ -1.84
HTT-211ENST00000513326 C1QTNF4Q9BXJ3 329 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 NKIRAS1Q9NYS0 192 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 IL20Q9NYY1 176 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 IDI2-AS1Q9NZ38 188 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 NUFIP1Q9UHK0 495 aaKnown RBP3.55□□□□□ -1.84
HTT-211ENST00000513326 GAB2Q9UQC2 676 aa3.55□□□□□ -1.84
HTT-211ENST00000513326 FAM32AQ9Y421 112 aaKnown RBP3.55□□□□□ -1.84
HTT-211ENST00000513326 LRP1BQ9NZR2 4599 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 MEIKINA0A087WXM9 373 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 A0A0G2JND7 137 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 A0A1W2PS18 150 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 ZNF729A6NN14 1252 aaPredicted RBP3.54□□□□□ -1.84
HTT-211ENST00000513326 RIIAD1A6NNX1 92 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 FCN1O00602 326 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 CNIH1O95406 144 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 GAPDHP04406 335 aaKnown RBP3.54□□□□□ -1.84
HTT-211ENST00000513326 OR5H8P0DN80 308 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 ZNF3P17036 446 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 ALDH3A2P51648 485 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 BNIP1Q12981 228 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 GAGE5Q13069 117 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 GAGE6Q13070 117 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 KLF5Q13887 457 aaPredicted RBP3.54□□□□□ -1.84
HTT-211ENST00000513326 CDK5R1Q15078 307 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 MMDQ15546 238 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 IZUMO4Q1ZYL8 232 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 COQ5Q5HYK3 327 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 RASSF6Q6ZTQ3 369 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 C5orf24Q7Z6I8 188 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 YIPF7Q8N8F6 280 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 OR5D18Q8NGL1 313 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 HAVCR2Q8TDQ0 301 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 RGP1Q92546 391 aaPredicted RBP3.54□□□□□ -1.84
HTT-211ENST00000513326 APOL4Q9BPW4 351 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 ANKRD60Q9BZ19 345 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 LINC00574Q9H8X3 128 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 HMG20AQ9NP66 347 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 EXOSC4Q9NPD3 245 aaKnown RBP3.54□□□□□ -1.84
HTT-211ENST00000513326 CMC2Q9NRP2 79 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 MRPS28Q9Y2Q9 187 aaKnown RBP3.54□□□□□ -1.84
HTT-211ENST00000513326 KLK5Q9Y337 293 aaPredicted RBP3.54□□□□□ -1.84
HTT-211ENST00000513326 TNFRSF18Q9Y5U5 241 aa3.54□□□□□ -1.84
HTT-211ENST00000513326 APOBP04114 4563 aaKnown RBP3.53□□□□□ -1.84
HTT-211ENST00000513326 IGKV2D-30A0A075B6S6 120 aa3.53□□□□□ -1.84
HTT-211ENST00000513326 TRAV24A0A0B4J272 114 aa3.53□□□□□ -1.84
HTT-211ENST00000513326 CCDC182A6NF36 153 aa3.53□□□□□ -1.84
HTT-211ENST00000513326 OR11H12B2RN74 326 aa3.53□□□□□ -1.84
HTT-211ENST00000513326 LOC110117498-PIK3R3F6TDL0 507 aa3.53□□□□□ -1.84
HTT-211ENST00000513326 H0Y980 276 aa3.53□□□□□ -1.84
HTT-211ENST00000513326 SH2D1BO14796 132 aa3.53□□□□□ -1.84
HTT-211ENST00000513326 HLA-DRB1P01911 266 aa3.53□□□□□ -1.84
HTT-211ENST00000513326 CSN2P05814 226 aa3.53□□□□□ -1.84
HTT-211ENST00000513326 OR2T7P0C7T2 308 aa3.53□□□□□ -1.84
HTT-211ENST00000513326 ATP6V1B1P15313 513 aa3.53□□□□□ -1.84
HTT-211ENST00000513326 ZNF44P15621 663 aa3.53□□□□□ -1.84
HTT-211ENST00000513326 H2AFXP16104 143 aaPredicted RBP3.53□□□□□ -1.84
HTT-211ENST00000513326 CTRB1P17538 263 aa3.53□□□□□ -1.84
HTT-211ENST00000513326 CCL1P22362 96 aa3.53□□□□□ -1.84
HTT-211ENST00000513326 SLC2A5P22732 501 aa3.53□□□□□ -1.84
HTT-211ENST00000513326 CD1BP29016 333 aa3.53□□□□□ -1.84
HTT-211ENST00000513326 MAGEA2P43356 314 aa3.53□□□□□ -1.84
HTT-211ENST00000513326 FUT6P51993 359 aa3.53□□□□□ -1.84
HTT-211ENST00000513326 TPPP2P59282 170 aa3.53□□□□□ -1.84
HTT-211ENST00000513326 RPL24P83731 157 aaKnown RBP3.53□□□□□ -1.84
HTT-211ENST00000513326 PNRC1Q12796 327 aaPredicted RBP3.53□□□□□ -1.84
HTT-211ENST00000513326 RAB40BQ12829 278 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms