RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 SLIRPQ9GZT3 109 aaKnown RBP13.97□□□□□ -0.17
DDR1-270ENST00000513043 C6orf62Q9GZU0 229 aaPredicted RBP13.97□□□□□ -0.17
DDR1-270ENST00000513043 IFT46Q9NQC8 304 aa13.97□□□□□ -0.17
DDR1-270ENST00000513043 C1RLQ9NZP8 487 aa13.97□□□□□ -0.17
DDR1-270ENST00000513043 EXTL2Q9UBQ6 330 aa13.97□□□□□ -0.17
DDR1-270ENST00000513043 SNRNP70P08621 437 aaKnown RBP13.96□□□□□ -0.17
DDR1-270ENST00000513043 PRSS3P35030 304 aa13.96□□□□□ -0.17
DDR1-270ENST00000513043 ZNF137PP52743 207 aa13.96□□□□□ -0.17
DDR1-270ENST00000513043 RELBQ01201 579 aa13.96□□□□□ -0.17
DDR1-270ENST00000513043 HES1Q14469 280 aa13.96□□□□□ -0.17
DDR1-270ENST00000513043 RPL39P5Q59GN2 51 aa13.96□□□□□ -0.17
DDR1-270ENST00000513043 RNASE12Q5GAN4 147 aaKnown RBP13.96□□□□□ -0.17
DDR1-270ENST00000513043 HOGA1Q86XE5 327 aa13.96□□□□□ -0.17
DDR1-270ENST00000513043 EDARADDQ8WWZ3 215 aa13.96□□□□□ -0.17
DDR1-270ENST00000513043 ANXA10Q9UJ72 324 aa13.96□□□□□ -0.17
DDR1-270ENST00000513043 PITPNC1Q9UKF7 332 aa13.96□□□□□ -0.17
DDR1-270ENST00000513043 TMEM89A2RUT3 159 aa13.95□□□□□ -0.18
DDR1-270ENST00000513043 DPPA5A6NC42 116 aa13.95□□□□□ -0.18
DDR1-270ENST00000513043 ZNF736B4DX44 427 aaPredicted RBP13.95□□□□□ -0.18
DDR1-270ENST00000513043 J3QRK9 145 aa13.95□□□□□ -0.18
DDR1-270ENST00000513043 OR8U9P0C7N5 309 aa13.95□□□□□ -0.18
DDR1-270ENST00000513043 CBX5P45973 191 aa13.95□□□□□ -0.18
DDR1-270ENST00000513043 RAG2P55895 527 aa13.95□□□□□ -0.18
DDR1-270ENST00000513043 ARPC4P59998 168 aa13.95□□□□□ -0.18
DDR1-270ENST00000513043 HNF4GQ14541 408 aa13.95□□□□□ -0.18
DDR1-270ENST00000513043 CNIH2Q6PI25 160 aa13.95□□□□□ -0.18
DDR1-270ENST00000513043 OR8U1Q8NH10 309 aa13.95□□□□□ -0.18
DDR1-270ENST00000513043 MCFD2Q8NI22 146 aa13.95□□□□□ -0.18
DDR1-270ENST00000513043 AGMATQ9BSE5 352 aa13.95□□□□□ -0.18
DDR1-270ENST00000513043 MRPL20Q9BYC9 149 aaKnown RBP13.95□□□□□ -0.18
DDR1-270ENST00000513043 ITGB1BP1O14713 200 aa13.94□□□□□ -0.18
DDR1-270ENST00000513043 LANCL1O43813 399 aa13.94□□□□□ -0.18
DDR1-270ENST00000513043 IGKV1D-33P01593 117 aa13.94□□□□□ -0.18
DDR1-270ENST00000513043 IGKV1-33P01594 117 aa13.94□□□□□ -0.18
DDR1-270ENST00000513043 LPLP06858 475 aa13.94□□□□□ -0.18
DDR1-270ENST00000513043 FAM106CPP0CH98 169 aa13.94□□□□□ -0.18
DDR1-270ENST00000513043 NFYAP23511 347 aaPredicted RBP13.94□□□□□ -0.18
DDR1-270ENST00000513043 LIAT1Q6ZQX7 453 aa13.94□□□□□ -0.18
DDR1-270ENST00000513043 Q6ZSV7 163 aa13.94□□□□□ -0.18
DDR1-270ENST00000513043 ZNF833PQ6ZTB9 187 aa13.94□□□□□ -0.18
DDR1-270ENST00000513043 H1FOOQ8IZA3 346 aaPredicted RBP13.94□□□□□ -0.18
DDR1-270ENST00000513043 SNAPC3Q92966 411 aa13.94□□□□□ -0.18
DDR1-270ENST00000513043 SLC25A33Q9BSK2 321 aa13.94□□□□□ -0.18
DDR1-270ENST00000513043 RAB18Q9NP72 206 aa13.94□□□□□ -0.18
DDR1-270ENST00000513043 PIPOXQ9P0Z9 390 aa13.94□□□□□ -0.18
DDR1-270ENST00000513043 ZNF221Q9UK13 617 aa13.94□□□□□ -0.18
DDR1-270ENST00000513043 ADAM30Q9UKF2 790 aa13.94□□□□□ -0.18
DDR1-270ENST00000513043 RBM7Q9Y580 266 aaKnown RBP13.94□□□□□ -0.18
DDR1-270ENST00000513043 FAM90A9PA6NNJ1 464 aa13.93□□□□□ -0.18
DDR1-270ENST00000513043 ZNF701M0R085 212 aaPredicted RBP13.93□□□□□ -0.18
DDR1-270ENST00000513043 RAB29O14966 203 aa13.93□□□□□ -0.18
DDR1-270ENST00000513043 TXNL1O43396 289 aa13.93□□□□□ -0.18
DDR1-270ENST00000513043 DIRAS3O95661 229 aa13.93□□□□□ -0.18
DDR1-270ENST00000513043 CTXN2P0C2S0 81 aa13.93□□□□□ -0.18
DDR1-270ENST00000513043 TMEM11P17152 192 aa13.93□□□□□ -0.18
DDR1-270ENST00000513043 MDKP21741 143 aaPredicted RBP13.93□□□□□ -0.18
DDR1-270ENST00000513043 GPR12P47775 334 aa13.93□□□□□ -0.18
DDR1-270ENST00000513043 RPL15P61313 204 aaKnown RBP13.93□□□□□ -0.18
DDR1-270ENST00000513043 AWAT1Q58HT5 328 aa13.93□□□□□ -0.18
DDR1-270ENST00000513043 S1PR3Q99500 378 aa13.93□□□□□ -0.18
DDR1-270ENST00000513043 ZNF251Q9BRH9 671 aa13.93□□□□□ -0.18
DDR1-270ENST00000513043 TOLLIPQ9H0E2 274 aa13.93□□□□□ -0.18
DDR1-270ENST00000513043 OR2D2Q9H210 308 aa13.93□□□□□ -0.18
DDR1-270ENST00000513043 FOXL1Q12952 345 aa13.92□□□□□ -0.18
DDR1-270ENST00000513043 LSAMPQ13449 338 aa13.92□□□□□ -0.18
DDR1-270ENST00000513043 GLDNQ6ZMI3 551 aaPredicted RBP13.92□□□□□ -0.18
DDR1-270ENST00000513043 THNSL2Q86YJ6 484 aa13.92□□□□□ -0.18
DDR1-270ENST00000513043 DRAXINQ8NBI3 349 aaPredicted RBP13.92□□□□□ -0.18
DDR1-270ENST00000513043 GPX8Q8TED1 209 aa13.92□□□□□ -0.18
DDR1-270ENST00000513043 DIRAS2Q96HU8 199 aa13.92□□□□□ -0.18
DDR1-270ENST00000513043 ABHD1Q96SE0 405 aa13.92□□□□□ -0.18
DDR1-270ENST00000513043 NABP2Q9BQ15 211 aa13.92□□□□□ -0.18
DDR1-270ENST00000513043 NPFFR1Q9GZQ6 430 aa13.92□□□□□ -0.18
DDR1-270ENST00000513043 OR2F2O95006 317 aa13.91□□□□□ -0.18
DDR1-270ENST00000513043 NDUFA7O95182 113 aa13.91□□□□□ -0.18
DDR1-270ENST00000513043 HABP2Q14520 560 aaPredicted RBP13.91□□□□□ -0.18
DDR1-270ENST00000513043 FOXB2Q5VYV0 432 aa13.91□□□□□ -0.18
DDR1-270ENST00000513043 C12orf54Q6X4T0 127 aa13.91□□□□□ -0.18
DDR1-270ENST00000513043 OR4C13Q8NGP0 309 aa13.91□□□□□ -0.18
DDR1-270ENST00000513043 OR4F5Q8NH21 305 aa13.91□□□□□ -0.18
DDR1-270ENST00000513043 EAF1Q96JC9 268 aaPredicted RBP13.91□□□□□ -0.18
DDR1-270ENST00000513043 RBM14Q96PK6 669 aaKnown RBP13.91□□□□□ -0.18
DDR1-270ENST00000513043 NXF2Q9GZY0 626 aaKnown RBP13.91□□□□□ -0.18
DDR1-270ENST00000513043 SCPEP1Q9HB40 452 aa13.91□□□□□ -0.18
DDR1-270ENST00000513043 NECAP2Q9NVZ3 263 aa13.91□□□□□ -0.18
DDR1-270ENST00000513043 ANAPC10Q9UM13 185 aa13.91□□□□□ -0.18
DDR1-270ENST00000513043 SIGLEC9Q9Y336 463 aa13.91□□□□□ -0.18
DDR1-270ENST00000513043 SH2D7A6NKC9 451 aaPredicted RBP13.9□□□□□ -0.18
DDR1-270ENST00000513043 PROP1O75360 226 aa13.9□□□□□ -0.18
DDR1-270ENST00000513043 PMP2P02689 132 aa13.9□□□□□ -0.18
DDR1-270ENST00000513043 CT45A6P0DMU7 189 aa13.9□□□□□ -0.18
DDR1-270ENST00000513043 CT45A5P0DMU8 189 aa13.9□□□□□ -0.18
DDR1-270ENST00000513043 CT45A7P0DMV0 189 aa13.9□□□□□ -0.18
DDR1-270ENST00000513043 OR5H8P0DN80 308 aa13.9□□□□□ -0.18
DDR1-270ENST00000513043 HLA-DMAP28067 261 aa13.9□□□□□ -0.18
DDR1-270ENST00000513043 CD1BP29016 333 aa13.9□□□□□ -0.18
DDR1-270ENST00000513043 LINC00205P59089 165 aa13.9□□□□□ -0.18
DDR1-270ENST00000513043 BLCAPP62952 87 aa13.9□□□□□ -0.18
DDR1-270ENST00000513043 CDK10Q15131 360 aa13.9□□□□□ -0.18
DDR1-270ENST00000513043 OR5AP2Q8NGF4 316 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms