RNA–Protein interactions for RNA: ENST00000513024.5

LIMCH1-218, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-218ENST00000513024 OR52E5Q8NH55 327 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 RFESDQ8TAC1 157 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 KCNS1Q96KK3 526 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 DUSP15Q9H1R2 295 aaPredicted RBP7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 M0R1B8 84 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 NDUFB4O95168 129 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 OR4A8P0C604 315 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 CEACAM1P13688 526 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 GABRG2P18507 467 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 ORM2P19652 201 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 GPR183P32249 361 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 CKS2P33552 79 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 MAS1LP35410 378 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 CEACAM16Q2WEN9 425 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 TIMM23BQ5SRD1 257 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 ZNF324BQ6AW86 544 aaPredicted RBP7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 C19orf48Q6RUI8 117 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 OR10V1Q8NGI7 309 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 SPSB1Q96BD6 273 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 TUBD1Q9UJT1 453 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 RTTNQ86VV8 2226 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 A6NNC1 897 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 TMEM50AO95807 157 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 OR3A4PP47883 348 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 SLC25A1P53007 311 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 GFERP55789 205 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 ISXQ2M1V0 245 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 DMKNQ6E0U4 476 aaPredicted RBP7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 CLN8Q9UBY8 286 aa7.64□□□□□ -1.19
LIMCH1-218ENST00000513024 TRAV8-6A0A0B4J262 113 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 NTN1O95631 604 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 PRSS12P56730 875 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 PRSS8Q16651 343 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 GCSAMLQ5JQS6 135 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 CLEC2AQ6UVW9 174 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 SNRNP40Q96DI7 357 aaKnown RBP7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 SLC26A1Q9H2B4 701 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 CLEC5AQ9NY25 188 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 SSC5DA1L4H1 1573 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 TRAV8-4A0A0B4J246 113 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 CDC14BO60729 498 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 ZNF205O95201 554 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 HKR1P10072 659 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 ESDP10768 282 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 KIAA1644Q3SXP7 199 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 OR10AC1Q8NH08 325 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 OR1F12Q8NHA8 337 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 GTF3AQ92664 365 aaKnown RBP7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 MRPL24Q96A35 216 aaKnown RBP7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 TMEM208Q9BTX3 173 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 RAXQ9Y2V3 346 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 ATRXP46100 2492 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 SPTY2D1-AS1A0A0U1RR47 76 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 A8MWV9 139 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 C3orf80F5H4A9 247 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 DNASE2O00115 360 aaPredicted RBP7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 SNRPCP09234 159 aaKnown RBP7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 C8orf82Q6P1X6 216 aaPredicted RBP7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 CD300LDQ6UXZ3 194 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 JMJD8Q96S16 334 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 MGST2Q99735 147 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 SMOC1Q9H4F8 434 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 THYN1Q9P016 225 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 TBL2Q9Y4P3 447 aaKnown RBP7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 RLFQ13129 1914 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 A8MXK9 166 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 TRDCB7Z8K6 153 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 UBE2CO00762 179 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 ITGB1BP1O14713 200 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 PITX3O75364 302 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 CEACAM5P06731 702 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 LCN2P80188 198 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 UBE2V1Q13404 147 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 ACSF3Q4G176 576 aaPredicted RBP7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 KRTCAP3Q53RY4 240 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 ZNF788Q6ZQV5 615 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 BIVMQ86UB2 503 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 SELENOHQ8IZQ5 122 aaKnown RBP7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 C10orf111Q8N326 155 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 ZNF414Q96IQ9 312 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 ABHD14AQ9BUJ0 271 aa7.63□□□□□ -1.19
LIMCH1-218ENST00000513024 TRAV39A0A0B4J263 110 aa7.62□□□□□ -1.19
LIMCH1-218ENST00000513024 DEFB108AA8MXU0 73 aa7.62□□□□□ -1.19
LIMCH1-218ENST00000513024 CEACAM6P40199 344 aa7.62□□□□□ -1.19
LIMCH1-218ENST00000513024 GAGE13Q4V321 117 aa7.62□□□□□ -1.19
LIMCH1-218ENST00000513024 MESTQ5EB52 335 aa7.62□□□□□ -1.19
LIMCH1-218ENST00000513024 TCF23Q7RTU1 214 aa7.62□□□□□ -1.19
LIMCH1-218ENST00000513024 CXorf67Q86X51 503 aaPredicted RBP7.62□□□□□ -1.19
LIMCH1-218ENST00000513024 ST6GALNAC6Q969X2 333 aa7.62□□□□□ -1.19
LIMCH1-218ENST00000513024 MISP3Q96FF7 219 aa7.62□□□□□ -1.19
LIMCH1-218ENST00000513024 SARGQ9BW04 601 aa7.62□□□□□ -1.19
LIMCH1-218ENST00000513024 WNT5BQ9H1J7 359 aa7.62□□□□□ -1.19
LIMCH1-218ENST00000513024 ANK1P16157 1881 aa7.62□□□□□ -1.19
LIMCH1-218ENST00000513024 KCNE1BA0A087WTH5 132 aa7.62□□□□□ -1.19
LIMCH1-218ENST00000513024 FRG2CA6NGY1 282 aa7.62□□□□□ -1.19
LIMCH1-218ENST00000513024 MS4A18H0YCH9 400 aa7.62□□□□□ -1.19
LIMCH1-218ENST00000513024 SNAI2O43623 268 aa7.62□□□□□ -1.19
LIMCH1-218ENST00000513024 FCGR3BO75015 233 aa7.62□□□□□ -1.19
LIMCH1-218ENST00000513024 MGPP08493 103 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms