RNA–Protein interactions for RNA: ENST00000512901.6

LINC01550-203, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 2,192 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-203ENST00000512901 ZNF645Q8N7E2 425 aa8.56□□□□□ -1.04
LINC01550-203ENST00000512901 CCDC71LQ8N9Z2 235 aa8.56□□□□□ -1.04
LINC01550-203ENST00000512901 ADAD2Q8NCV1 583 aaKnown RBP8.56□□□□□ -1.04
LINC01550-203ENST00000512901 ZNF439Q8NDP4 499 aa8.56□□□□□ -1.04
LINC01550-203ENST00000512901 CT45A3Q8NHU0 189 aa8.56□□□□□ -1.04
LINC01550-203ENST00000512901 FAM216AQ8WUB2 273 aa8.56□□□□□ -1.04
LINC01550-203ENST00000512901 ZNF486Q96H40 463 aaPredicted RBP8.56□□□□□ -1.04
LINC01550-203ENST00000512901 RTBDNQ9BSG5 229 aaPredicted RBP8.56□□□□□ -1.04
LINC01550-203ENST00000512901 HEXA-AS1Q9H8Q6 139 aa8.56□□□□□ -1.04
LINC01550-203ENST00000512901 INSIG2Q9Y5U4 225 aa8.56□□□□□ -1.04
LINC01550-203ENST00000512901 CREBBPQ92793 2442 aa8.56□□□□□ -1.04
LINC01550-203ENST00000512901 NOTCH2Q04721 2471 aa8.56□□□□□ -1.04
LINC01550-203ENST00000512901 A0A087X0M5 115 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 IGHV2-26A0A0B4J1V2 119 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 A0A1B0GX30 115 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 SLC22A5O76082 557 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 Q3ZCU0 254 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 SLC25A48Q6ZT89 311 aaKnown RBP8.55□□□□□ -1.04
LINC01550-203ENST00000512901 LYG1Q8N1E2 194 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 PNKDQ8N490 385 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 OR10X1Q8NGY0 326 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 AKR1E2Q96JD6 320 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 CLEC7AQ9BXN2 247 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 SIRPDQ9H106 197 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 SLC2A9Q9NRM0 540 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.55□□□□□ -1.04
LINC01550-203ENST00000512901 BAHCC1Q9P281 2608 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 TRAV20A0A0B4J274 112 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 TEX13DA0A0J9YY54 714 aaPredicted RBP8.55□□□□□ -1.04
LINC01550-203ENST00000512901 J3QR06 171 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 TNFSF12O43508 249 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 PRAF2O60831 178 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 OR4E1P0C645 316 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 CD34P28906 385 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 GZMKP49863 264 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 PRRX1P54821 245 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 TATDN3Q17R31 274 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 TMEM249Q2WGJ8 235 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 C11orf88Q6PI97 169 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 SLC25A42Q86VD7 318 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 DRAM1Q8N682 238 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 CAPSLQ8WWF8 208 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 TMEM186Q96B77 213 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 C1orf159Q96HA4 380 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 AGMATQ9BSE5 352 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 IFI27L2Q9H2X8 130 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 GPN1Q9HCN4 374 aaPredicted RBP8.55□□□□□ -1.04
LINC01550-203ENST00000512901 HIF1ANQ9NWT6 349 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 PIPOXQ9P0Z9 390 aa8.55□□□□□ -1.04
LINC01550-203ENST00000512901 RAB29O14966 203 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 TGFAP01135 160 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 VSIG10L2P0DP72 767 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 VAMP1P23763 118 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 EIF2B2P49770 351 aaKnown RBP8.54□□□□□ -1.04
LINC01550-203ENST00000512901 MECP2P51608 486 aaKnown RBP8.54□□□□□ -1.04
LINC01550-203ENST00000512901 CBX3Q13185 183 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 KLRD1Q13241 179 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 TMEM128Q5BJH2 165 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 SGPP2Q8IWX5 399 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 C8orf31Q8N9H6 132 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 ZBTB34Q8NCN2 500 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 RTN4IP1Q8WWV3 396 aaPredicted RBP8.54□□□□□ -1.04
LINC01550-203ENST00000512901 TNFRSF14Q92956 283 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 MSI2Q96DH6 328 aaKnown RBP8.54□□□□□ -1.04
LINC01550-203ENST00000512901 ALX4Q9H161 411 aaPredicted RBP8.54□□□□□ -1.04
LINC01550-203ENST00000512901 GHITMQ9H3K2 345 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 ZNRD1Q9P1U0 126 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 SAA2-SAA4A0A096LPE2 208 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 SMAD7O15105 426 aaKnown RBP8.54□□□□□ -1.04
LINC01550-203ENST00000512901 HLA-AP01891 365 aaKnown RBP8.54□□□□□ -1.04
LINC01550-203ENST00000512901 ARG1P05089 322 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 SAA2P0DJI9 122 aaPredicted RBP8.54□□□□□ -1.04
LINC01550-203ENST00000512901 IGHV4-31P0DP07 118 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 MMP9P14780 707 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 GATA3P23771 443 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 IL3RAP26951 378 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 UBE2MP61081 183 aaKnown RBP8.54□□□□□ -1.04
LINC01550-203ENST00000512901 PAX8Q06710 450 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 MSMO1Q15800 293 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 NCR3LG1Q68D85 454 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 FAHD2BQ6P2I3 314 aaPredicted RBP8.54□□□□□ -1.04
LINC01550-203ENST00000512901 GLDNQ6ZMI3 551 aaPredicted RBP8.54□□□□□ -1.04
LINC01550-203ENST00000512901 TBC1D26Q86UD7 250 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 PDZD9Q8IXQ8 264 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 LINC00311Q8N616 119 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 BVESQ8NE79 360 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 ZNF596Q8TC21 504 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 LHX4Q969G2 390 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 TMEM230Q96A57 120 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 FAHD2AQ96GK7 314 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 GPHA2Q96T91 129 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 S1PR3Q99500 378 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 SEC22CQ9BRL7 303 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 UNKLQ9H9P5 680 aaKnown RBP8.54□□□□□ -1.04
LINC01550-203ENST00000512901 SDHAF2Q9NX18 166 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 ALG5Q9Y673 324 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 AUP1Q9Y679 476 aa8.54□□□□□ -1.04
LINC01550-203ENST00000512901 FLNBO75369 2602 aaKnown RBP8.53□□□□□ -1.04
LINC01550-203ENST00000512901 ITPR3Q14573 2671 aa8.53□□□□□ -1.04
LINC01550-203ENST00000512901 CRYM-AS1A6NIL9 109 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms