RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 GATCO43716 136 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 RAMP3O60896 148 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 IGHEP01854 428 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 G6PCP35575 357 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 RNPS1Q15287 305 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 NCR3LG1Q68D85 454 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 Q6P435 159 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 C16orf82Q7Z2V1 217 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 OR51I2Q9H344 312 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 TMEM9BQ9NQ34 198 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 MPC1Q9Y5U8 109 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 SVILO95425 2214 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 NXPH2O95156 264 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 ARR3P36575 388 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 RND2P52198 227 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 CD81P60033 236 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 SERF2P84101 59 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 NRN1LQ496H8 165 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 CXorf67Q86X51 503 aaPredicted RBP7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 TMEM251Q8N6I4 163 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 OR13D1Q8NGV5 346 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 LSM10Q969L4 123 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 MEGF10Q96KG7 1140 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 HIST1H2BLQ99880 126 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 FAM173AQ9BQD7 235 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 OR5B21A6NL26 309 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 TMEM241Q24JQ0 296 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 TMEM41BQ5BJD5 291 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 ACSM6Q6P461 480 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 MDP1Q86V88 176 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 ELOVL1Q9BW60 279 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 AURKAIP1Q9NWT8 199 aaPredicted RBP7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 B4GALT7Q9UBV7 327 aa7.82□□□□□ -1.16
LIMCH1-215ENST00000512632 SMCO3A2RU48 225 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 OR1C1Q15619 314 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 WDR86Q86TI4 376 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 OR10A7Q8NGE5 316 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 OR10G4Q8NGN3 311 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 OR1L1Q8NH94 360 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 GTF3AQ92664 365 aaKnown RBP7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 PSMG3Q9BT73 122 aaPredicted RBP7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 TTTY12Q9BZ98 90 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 OPA3Q9H6K4 179 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 A0A1W2PPQ1 181 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 J3QT63 122 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 GALR2O43603 387 aaPredicted RBP7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 IFNA1P01562 189 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 OPN1MWP04001 364 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 CELA3BP08861 270 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 OPN1MW2P0DN77 364 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 OPN1MW3P0DN78 364 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 COX5BP10606 129 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 SLC25A6P12236 298 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 EGR1P18146 543 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 MEF2BQ02080 365 aaPredicted RBP7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 BSXQ3C1V8 233 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 OR4F5Q8NH21 305 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 TMEM37Q8WXS4 190 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 OR4F4Q96R69 305 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 OR2J1Q9GZK6 312 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 ELOA3CA0A087WX78 387 aaPredicted RBP7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 OR3A1P47881 315 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 RPL30P62888 115 aaKnown RBP7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 PLPPR2Q96GM1 343 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 C14orf144Q96I85 54 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 DEFB127Q9H1M4 99 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 HIPK2Q9H2X6 1198 aa7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 LIN7CQ9NUP9 197 aaKnown RBP7.81□□□□□ -1.16
LIMCH1-215ENST00000512632 TRBV6-6A0A0A6YYG2 114 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 H7BYZ3 331 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 GZMHP20718 246 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 IL2RGP31785 369 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 IDH3GP51553 393 aaPredicted RBP7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 COL10A1Q03692 680 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 TPRX1Q8N7U7 411 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 SCCPDHQ8NBX0 429 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 PINX1Q96BK5 328 aaKnown RBP7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 WDYHV1Q96HA8 205 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 PCGF1Q9BSM1 259 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 MRPS18CQ9Y3D5 142 aaKnown RBP7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 TRBV24-1A0A075B6N3 115 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 IL18BPO95998 194 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 BTNL3Q6UXE8 466 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 ZNF66Q6ZN08 573 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 ZNF826PQ6ZT77 177 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 OR52L2PQ8NGH6 319 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 RFESDQ8TAC1 157 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 ZDHHC16Q969W1 377 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 NAT8Q9UHE5 227 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 RNF224P0DH78 156 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 RPL23P62829 140 aaKnown RBP7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 TNFRSF9Q07011 255 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 P2RX4Q99571 388 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 OR2D2Q9H210 308 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 ICE1Q9Y2F5 2266 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 A0A1B0GV90 55 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 YKT6O15498 198 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 PSPNO60542 156 aa7.8□□□□□ -1.16
LIMCH1-215ENST00000512632 SS18L1O75177 396 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms