RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 ZNF846Q147U1 533 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 MPPED2Q15777 294 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 ODF4Q2M2E3 257 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 C5orf64Q2M2E5 130 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 ZNF585BQ52M93 769 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 SAMD5Q5TGI4 173 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 RNLSQ5VYX0 342 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 ZNF66Q6ZN08 573 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 LINC00336Q6ZUF6 198 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 RBM45Q8IUH3 476 aaKnown RBP2.29□□□□□ -2.04
CLOCK-209ENST00000511124 BCL6BQ8N143 479 aaPredicted RBP2.29□□□□□ -2.04
CLOCK-209ENST00000511124 RNF148Q8N7C7 305 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 OR4A4PQ8NGN8 299 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 OR10J6PQ8NGY7 276 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 COQ8AQ8NI60 647 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 MARCH1Q8TCQ1 289 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 Q8WTZ3 238 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 GATAD1Q8WUU5 269 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 TCTEX1D2Q8WW35 142 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 RAB3CQ96E17 227 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 ZNF837Q96EG3 531 aaPredicted RBP2.29□□□□□ -2.04
CLOCK-209ENST00000511124 BSCL2Q96G97 398 aaPredicted RBP2.29□□□□□ -2.04
CLOCK-209ENST00000511124 SLC35E1Q96K37 410 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 YPEL2Q96QA6 119 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 SPAG8Q99932 426 aaPredicted RBP2.29□□□□□ -2.04
CLOCK-209ENST00000511124 MRPL27Q9P0M9 148 aaKnown RBP2.29□□□□□ -2.04
CLOCK-209ENST00000511124 COL6A3P12111 3177 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 PQLC2LA1A4F0 135 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 RRHO14718 337 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 MLNRO43193 412 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 WIPF1O43516 503 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 GNG7O60262 68 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 SELENOFO60613 162 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 ISG15P05161 165 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 FCER2P06734 321 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 GNRHRP30968 328 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 OR10A3P58181 314 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 KLRD1Q13241 179 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 AKIRIN2Q53H80 203 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 SIGIRRQ6IA17 410 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 TBPL2Q6SJ96 375 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 GLIPR1L1Q6UWM5 242 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 OVCH2Q7RTZ1 564 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 FAM122BQ7Z309 247 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 FUNDC1Q8IVP5 155 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 LRRC75AQ8NAA5 344 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 FGFBP3Q8TAT2 258 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 S100A16Q96FQ6 103 aaKnown RBP2.29□□□□□ -2.04
CLOCK-209ENST00000511124 FYTTD1Q96QD9 318 aaKnown RBP2.29□□□□□ -2.04
CLOCK-209ENST00000511124 POMPQ9Y244 141 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 V9GYS6 101 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 UNC79Q9P2D8 2635 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 UNC80Q8N2C7 3258 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 NUP214P35658 2090 aaPredicted RBP2.29□□□□□ -2.04
CLOCK-209ENST00000511124 A0A075B6Q4 140 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 A0A096LNT2 108 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 KIR2DL5BA0A0G2JN68 375 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 KIR2DL5BA0A0G2JPC4 375 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 CRYM-AS1A6NIL9 109 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 H0YL77 283 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 GABRPO00591 440 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 DIRAS1O95057 198 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 LHBP01229 141 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 TBPP20226 339 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 PVALBP20472 110 aaPredicted RBP2.29□□□□□ -2.04
CLOCK-209ENST00000511124 CEBPDP49716 269 aaPredicted RBP2.29□□□□□ -2.04
CLOCK-209ENST00000511124 LRRC36Q1X8D7 754 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 RRN3P1Q2M238 152 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 TP53I3Q53FA7 332 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 FAM201AQ5SY85 155 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 FDX2Q6P4F2 183 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 ZNF562Q6V9R5 426 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 TMEM219Q86XT9 240 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 ZNF584Q8IVC4 421 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 KIR2DL5AQ8N109 375 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 Q8N2B8 174 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 PQLC1Q8N2U9 271 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 OR9Q2Q8NGE9 314 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 OR14K1Q8NGZ2 314 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 KIR2DL5BQ8NHK3 375 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 RORBQ92753 470 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 TMEM106AQ96A25 262 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 C20orf24Q9BUV8 137 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 DCSTAMPQ9H295 470 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 TAF9BQ9HBM6 251 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 C19orf12Q9NSK7 152 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 PSG11Q9UQ72 335 aa2.29□□□□□ -2.04
CLOCK-209ENST00000511124 COL27A1Q8IZC6 1860 aaPredicted RBP2.29□□□□□ -2.04
CLOCK-209ENST00000511124 IGHV1-3A0A0C4DH29 117 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 C12orf77C9JDV5 145 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 BMPR1BO00238 502 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 P0DMU3 169 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 FAM231AP0DMU4 169 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 FAM231CP0DMU5 169 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 CD28P10747 220 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 MGMTP16455 207 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 CCL3L1P16619 93 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 AKR1C4P17516 323 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 ARL3P36405 182 aa2.28□□□□□ -2.04
CLOCK-209ENST00000511124 RBM11P57052 281 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms