RNA–Protein interactions for RNA: ENST00000509454.5

LIMCH1-210, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-210ENST00000509454 A6NDX4 124 aa9.18□□□□□ -0.94
LIMCH1-210ENST00000509454 IGKV1D-33P01593 117 aa9.18□□□□□ -0.94
LIMCH1-210ENST00000509454 IGKV1-33P01594 117 aa9.18□□□□□ -0.94
LIMCH1-210ENST00000509454 SAA2P0DJI9 122 aaPredicted RBP9.18□□□□□ -0.94
LIMCH1-210ENST00000509454 HKR1P10072 659 aa9.18□□□□□ -0.94
LIMCH1-210ENST00000509454 TMEM11P17152 192 aa9.18□□□□□ -0.94
LIMCH1-210ENST00000509454 GPR12P47775 334 aa9.18□□□□□ -0.94
LIMCH1-210ENST00000509454 ZNF816Q0VGE8 651 aaPredicted RBP9.18□□□□□ -0.94
LIMCH1-210ENST00000509454 SRSF7Q16629 238 aaKnown RBP eCLIP9.18□□□□□ -0.94
LIMCH1-210ENST00000509454 LAX1Q8IWV1 398 aa9.18□□□□□ -0.94
LIMCH1-210ENST00000509454 OR4C13Q8NGP0 309 aa9.18□□□□□ -0.94
LIMCH1-210ENST00000509454 OR4F5Q8NH21 305 aa9.18□□□□□ -0.94
LIMCH1-210ENST00000509454 MCFD2Q8NI22 146 aa9.18□□□□□ -0.94
LIMCH1-210ENST00000509454 ABHD14BQ96IU4 210 aa9.18□□□□□ -0.94
LIMCH1-210ENST00000509454 S1PR3Q99500 378 aa9.18□□□□□ -0.94
LIMCH1-210ENST00000509454 CABLES2Q9BTV7 478 aa9.18□□□□□ -0.94
LIMCH1-210ENST00000509454 NPFFR1Q9GZQ6 430 aa9.18□□□□□ -0.94
LIMCH1-210ENST00000509454 IFI27L2Q9H2X8 130 aa9.18□□□□□ -0.94
LIMCH1-210ENST00000509454 C1RLQ9NZP8 487 aa9.18□□□□□ -0.94
LIMCH1-210ENST00000509454 ANXA10Q9UJ72 324 aa9.18□□□□□ -0.94
LIMCH1-210ENST00000509454 TRBV6-7A0A0A0MS04 114 aa9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 CTDSP2O14595 271 aa9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 RAB29O14966 203 aa9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 TXNL1O43396 289 aa9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 LANCL1O43813 399 aa9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 CHST1O43916 411 aa9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 CTXN2P0C2S0 81 aa9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 OR8U9P0C7N5 309 aa9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 RPL15P61313 204 aaKnown RBP9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 FOXL1Q12952 345 aa9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 RPL39P5Q59GN2 51 aa9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 LY6G6FQ5SQ64 297 aa9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 CNIH2Q6PI25 160 aa9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 CCBE1Q6UXH8 406 aaPredicted RBP9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 Q6ZS49 121 aa9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 HOGA1Q86XE5 327 aa9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 OR8U1Q8NH10 309 aa9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 AKR1E2Q96JD6 320 aa9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 SLC25A33Q9BSK2 321 aa9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 MRPL20Q9BYC9 149 aaKnown RBP9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 PIPOXQ9P0Z9 390 aa9.17□□□□□ -0.94
LIMCH1-210ENST00000509454 TMEM89A2RUT3 159 aa9.16□□□□□ -0.94
LIMCH1-210ENST00000509454 NFYAP23511 347 aaPredicted RBP9.16□□□□□ -0.94
LIMCH1-210ENST00000509454 ST6GALNAC6Q969X2 333 aa9.16□□□□□ -0.94
LIMCH1-210ENST00000509454 DIRAS2Q96HU8 199 aa9.16□□□□□ -0.94
LIMCH1-210ENST00000509454 OR2D2Q9H210 308 aa9.16□□□□□ -0.94
LIMCH1-210ENST00000509454 BEX1Q9HBH7 125 aa9.16□□□□□ -0.94
LIMCH1-210ENST00000509454 NECAP2Q9NVZ3 263 aa9.16□□□□□ -0.94
LIMCH1-210ENST00000509454 NCBP2LA6PVI3 153 aaKnown RBP9.15□□□□□ -0.94
LIMCH1-210ENST00000509454 M0R1X1 148 aa9.15□□□□□ -0.94
LIMCH1-210ENST00000509454 ITGB1BP1O14713 200 aa9.15□□□□□ -0.94
LIMCH1-210ENST00000509454 NDUFA7O95182 113 aa9.15□□□□□ -0.94
LIMCH1-210ENST00000509454 DIRAS3O95661 229 aa9.15□□□□□ -0.94
LIMCH1-210ENST00000509454 HLA-DQB1P01920 261 aa9.15□□□□□ -0.94
LIMCH1-210ENST00000509454 MDKP21741 143 aaPredicted RBP9.15□□□□□ -0.94
LIMCH1-210ENST00000509454 ZNF137PP52743 207 aa9.15□□□□□ -0.94
LIMCH1-210ENST00000509454 RELBQ01201 579 aa9.15□□□□□ -0.94
LIMCH1-210ENST00000509454 AWAT1Q58HT5 328 aa9.15□□□□□ -0.94
LIMCH1-210ENST00000509454 C9orf152Q5JTZ5 239 aa9.15□□□□□ -0.94
LIMCH1-210ENST00000509454 ODF3L1Q8IXM7 274 aa9.15□□□□□ -0.94
LIMCH1-210ENST00000509454 H1FOOQ8IZA3 346 aaPredicted RBP9.15□□□□□ -0.94
LIMCH1-210ENST00000509454 C3orf56Q8N813 242 aa9.15□□□□□ -0.94
LIMCH1-210ENST00000509454 OR2T10Q8NGZ9 312 aa9.15□□□□□ -0.94
LIMCH1-210ENST00000509454 CFHR4Q92496 578 aa9.15□□□□□ -0.94
LIMCH1-210ENST00000509454 RBM38Q9H0Z9 239 aaKnown RBP9.15□□□□□ -0.94
LIMCH1-210ENST00000509454 MIXL1Q9H2W2 232 aa9.15□□□□□ -0.94
LIMCH1-210ENST00000509454 COL6A5A8TX70 2615 aa9.15□□□□□ -0.94
LIMCH1-210ENST00000509454 ZNF736B4DX44 427 aaPredicted RBP9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 H7C2Y5 167 aa9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 ZNF701M0R085 212 aaPredicted RBP9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 OR2F2O95006 317 aa9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 MOSP00540 346 aa9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 PMP2P02689 132 aa9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 CD1BP29016 333 aa9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 LUMP51884 338 aaPredicted RBP9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 LSAMPQ13449 338 aa9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 IL18Q14116 193 aa9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 GLDNQ6ZMI3 551 aaPredicted RBP9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 Q6ZSV7 163 aa9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 ZNF833PQ6ZTB9 187 aa9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 C16orf82Q7Z2V1 217 aa9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 THNSL2Q86YJ6 484 aa9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 DRAXINQ8NBI3 349 aaPredicted RBP9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 OR5H2Q8NGV7 314 aa9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 OR2T6Q8NHC8 308 aa9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 C15orf40Q8WUR7 153 aa9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 RBM14Q96PK6 669 aaKnown RBP9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 SLIRPQ9GZT3 109 aaKnown RBP9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 GHITMQ9H3K2 345 aa9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 SCPEP1Q9HB40 452 aa9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 EHFQ9NZC4 300 aa9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 NDUFA13Q9P0J0 144 aa9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 MOB4Q9Y3A3 225 aa9.15□□□□□ -0.95
LIMCH1-210ENST00000509454 DPPA5A6NC42 116 aa9.14□□□□□ -0.95
LIMCH1-210ENST00000509454 SH2D7A6NKC9 451 aaPredicted RBP9.14□□□□□ -0.95
LIMCH1-210ENST00000509454 PEX14O75381 377 aa9.14□□□□□ -0.95
LIMCH1-210ENST00000509454 OR5H8P0DN80 308 aa9.14□□□□□ -0.95
LIMCH1-210ENST00000509454 HLA-DMAP28067 261 aa9.14□□□□□ -0.95
LIMCH1-210ENST00000509454 FCGR2CP31995 323 aa9.14□□□□□ -0.95
LIMCH1-210ENST00000509454 S100A5P33763 92 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms