RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 TMEM267Q0VDI3 215 aaPredicted RBP3.73□□□□□ -1.81
NIPBL-206ENST00000509429 PNRC1Q12796 327 aaPredicted RBP3.73□□□□□ -1.81
NIPBL-206ENST00000509429 OPCMLQ14982 345 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 BATFQ16520 125 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 TIMM50Q3ZCQ8 353 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 FAM153CQ494X1 144 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 ZNF542PQ5EBM4 170 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 FAM27D1Q5T7N8 215 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 BCL2L15Q5TBC7 163 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 FOXI2Q6ZQN5 318 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 CDC20BQ86Y33 519 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 LINC01561Q8N1V8 128 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 TMEM86AQ8N2M4 240 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 STPG4Q8N801 248 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 OR5AP2Q8NGF4 316 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 OR2T27Q8NH04 317 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 OR1L1Q8NH94 360 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 FNDC9Q8TBE3 224 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 RDH11Q8TC12 318 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 RNF128Q8TEB7 428 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 SLC37A2Q8TED4 501 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 ZNRF4Q8WWF5 429 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 TMEM106AQ96A25 262 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 PHYHIPLQ96FC7 376 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 SEC22AQ96IW7 307 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 SCGB3A2Q96PL1 93 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 DERL3Q96Q80 235 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 FAM173AQ9BQD7 235 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 ULBP3Q9BZM4 244 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 COA1Q9GZY4 146 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 ZNF442Q9H7R0 627 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 SLC25A19Q9HC21 320 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 VAX2Q9UIW0 290 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 SIGLEC7Q9Y286 467 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 ASF1AQ9Y294 204 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 POLR1DQ9Y2S0 133 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 LY75O60449 1722 aa3.73□□□□□ -1.81
NIPBL-206ENST00000509429 SCN4AP35499 1836 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 H0YJW9 148 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 CCL24O00175 119 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 SLC37A4O43826 429 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 DHRS3O75911 302 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 NDUFB4O95168 129 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 OR2H2O95918 312 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 HLA-DQB2P05538 268 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 ZNF728P0DKX0 622 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 CD59P13987 128 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 ZNF708P17019 499 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 EDNRAP25101 427 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 SHC1P29353 583 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 TNFSF8P32971 234 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 POLR2HP52434 150 aaKnown RBP3.72□□□□□ -1.81
NIPBL-206ENST00000509429 FOXA1P55317 472 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 PPP1CBP62140 327 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 BTG1P62324 171 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 RPS4XP62701 263 aaKnown RBP3.72□□□□□ -1.81
NIPBL-206ENST00000509429 GAGE2BQ13066 116 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 DHRS2Q13268 280 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 RBM39Q14498 530 aaKnown RBP3.72□□□□□ -1.81
NIPBL-206ENST00000509429 LY6KQ17RY6 165 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 GAGE2EQ4V326 116 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 PRR30Q53SZ7 412 aaPredicted RBP3.72□□□□□ -1.81
NIPBL-206ENST00000509429 DCAF12Q5T6F0 453 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 LCN10Q6JVE6 187 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 GAGE2AQ6NT46 116 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 CGB2Q6NT52 195 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 C8orf82Q6P1X6 216 aaPredicted RBP3.72□□□□□ -1.81
NIPBL-206ENST00000509429 ZNF773Q6PK81 442 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 EPGNQ6UW88 154 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 Q71RC1 249 aaPredicted RBP3.72□□□□□ -1.81
NIPBL-206ENST00000509429 OOSP2Q86WS3 158 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 HOGA1Q86XE5 327 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 TMEM219Q86XT9 240 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 MMD2Q8IY49 270 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 ZNF615Q8N8J6 731 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 KLHDC9Q8NEP7 349 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 OR11G2Q8NGC1 345 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 CNIH3Q8TBE1 160 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 RXFP2Q8WXD0 754 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 TSACCQ96A04 125 aaPredicted RBP3.72□□□□□ -1.81
NIPBL-206ENST00000509429 HSD17B10Q99714 261 aaKnown RBP3.72□□□□□ -1.81
NIPBL-206ENST00000509429 C19orf24Q9BVV8 132 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 PRSS22Q9GZN4 317 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 SLIRPQ9GZT3 109 aaKnown RBP3.72□□□□□ -1.81
NIPBL-206ENST00000509429 MED28Q9H204 178 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 ISG20L2Q9H9L3 353 aaKnown RBP3.72□□□□□ -1.81
NIPBL-206ENST00000509429 ZNF586Q9NXT0 402 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 TAS2R8Q9NYW2 309 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 KLHL13Q9P2N7 655 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 GAGE2DQ9UEU5 116 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 SCML2Q9UQR0 700 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 PKIGQ9Y2B9 76 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 FLVCR1Q9Y5Y0 555 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 BTAF1O14981 1849 aa3.72□□□□□ -1.81
NIPBL-206ENST00000509429 ZNF705GA8MUZ8 300 aaPredicted RBP3.71□□□□□ -1.82
NIPBL-206ENST00000509429 EEF1E1-BLOC1S5C9J1V9 151 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 FAM157AC9JC47 383 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 G3V3Q6 166 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 K7EMT4 169 aa3.71□□□□□ -1.82
NIPBL-206ENST00000509429 K7ENP7 123 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms