RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ECSCRQ19T08 205 aa11.98□□□□□ -0.49
TPM3-219ENST00000509409 RNLSQ5VYX0 342 aa11.98□□□□□ -0.49
TPM3-219ENST00000509409 FAM131AQ6UXB0 335 aa11.98□□□□□ -0.49
TPM3-219ENST00000509409 ASCL2Q99929 193 aa11.98□□□□□ -0.49
TPM3-219ENST00000509409 TM2D1Q9BX74 207 aa11.98□□□□□ -0.49
TPM3-219ENST00000509409 SLC23A1Q9UHI7 598 aa11.98□□□□□ -0.49
TPM3-219ENST00000509409 A3GALT2U3KPV4 340 aa11.98□□□□□ -0.49
TPM3-219ENST00000509409 H7C2Y5 167 aa11.97□□□□□ -0.49
TPM3-219ENST00000509409 I3L521 148 aa11.97□□□□□ -0.49
TPM3-219ENST00000509409 CASQ2O14958 399 aaPredicted RBP11.97□□□□□ -0.49
TPM3-219ENST00000509409 HSPA12AO43301 675 aa11.97□□□□□ -0.49
TPM3-219ENST00000509409 BPNT1O95861 308 aa11.97□□□□□ -0.49
TPM3-219ENST00000509409 CEACAM6P40199 344 aa11.97□□□□□ -0.49
TPM3-219ENST00000509409 GNB1P62873 340 aa11.97□□□□□ -0.49
TPM3-219ENST00000509409 UNC119Q13432 240 aa11.97□□□□□ -0.49
TPM3-219ENST00000509409 FHL3Q13643 280 aa11.97□□□□□ -0.49
TPM3-219ENST00000509409 P2RY14Q15391 338 aa11.97□□□□□ -0.49
TPM3-219ENST00000509409 RPL39P5Q59GN2 51 aa11.97□□□□□ -0.49
TPM3-219ENST00000509409 LIPKQ5VXJ0 399 aa11.97□□□□□ -0.49
TPM3-219ENST00000509409 FAM71F2Q6NXP2 309 aa11.97□□□□□ -0.49
TPM3-219ENST00000509409 GLDNQ6ZMI3 551 aaPredicted RBP11.97□□□□□ -0.49
TPM3-219ENST00000509409 SVOPQ8N4V2 548 aa11.97□□□□□ -0.49
TPM3-219ENST00000509409 UFD1Q92890 307 aa11.97□□□□□ -0.49
TPM3-219ENST00000509409 TMEM203Q969S6 136 aa11.97□□□□□ -0.49
TPM3-219ENST00000509409 URM1Q9BTM9 101 aaKnown RBP11.97□□□□□ -0.49
TPM3-219ENST00000509409 IFI27L2Q9H2X8 130 aa11.97□□□□□ -0.49
TPM3-219ENST00000509409 RIMS4Q9H426 269 aaPredicted RBP11.97□□□□□ -0.49
TPM3-219ENST00000509409 FBXL15Q9H469 300 aa11.97□□□□□ -0.49
TPM3-219ENST00000509409 PLGRKTQ9HBL7 147 aa11.97□□□□□ -0.49
TPM3-219ENST00000509409 ZNF256Q9Y2P7 627 aaPredicted RBP11.97□□□□□ -0.49
TPM3-219ENST00000509409 LSM4Q9Y4Z0 139 aaKnown RBP11.97□□□□□ -0.49
TPM3-219ENST00000509409 COL7A1Q02388 2944 aa11.97□□□□□ -0.49
TPM3-219ENST00000509409 A0A1W2PN81 502 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 TMEM14DPA8MWL7 114 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 SLC22A1O15245 554 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 SOCS1O15524 211 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 NDUFA3O95167 84 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 IGLV1-40P01703 118 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 UCHL1P09936 223 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 HSMCR30P0CW71 290 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 CT45A6P0DMU7 189 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 CT45A5P0DMU8 189 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 CT45A7P0DMV0 189 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 ARSBP15848 533 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 MC5RP33032 325 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 CHRNA7P36544 502 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 INSL3P51460 131 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 RUNX1Q01196 453 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 TMEM267Q0VDI3 215 aaPredicted RBP11.96□□□□□ -0.49
TPM3-219ENST00000509409 ZNF660Q6AZW8 331 aaPredicted RBP11.96□□□□□ -0.49
TPM3-219ENST00000509409 ZNF880Q6PDB4 577 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 MOB1BQ7L9L4 216 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 MINDY2Q8NBR6 621 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 OR6M1Q8NGM8 313 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 MYOZ3Q8TDC0 251 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 DCUN1D4Q92564 292 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 ABHD14BQ96IU4 210 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 CLCC1Q96S66 551 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 AK3Q9UIJ7 227 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 RNF150Q9ULK6 438 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 U3KQK5 164 aa11.96□□□□□ -0.49
TPM3-219ENST00000509409 A0A0A6YYD4 124 aa11.95□□□□□ -0.5
TPM3-219ENST00000509409 FCN1O00602 326 aa11.95□□□□□ -0.5
TPM3-219ENST00000509409 RRHO14718 337 aa11.95□□□□□ -0.5
TPM3-219ENST00000509409 NAPSAO96009 420 aa11.95□□□□□ -0.5
TPM3-219ENST00000509409 ZBTB25P24278 435 aa11.95□□□□□ -0.5
TPM3-219ENST00000509409 CX3CL1P78423 397 aa11.95□□□□□ -0.5
TPM3-219ENST00000509409 QRFPP83859 136 aa11.95□□□□□ -0.5
TPM3-219ENST00000509409 EDARADDQ8WWZ3 215 aa11.95□□□□□ -0.5
TPM3-219ENST00000509409 HDHD3Q9BSH5 251 aaPredicted RBP11.95□□□□□ -0.5
TPM3-219ENST00000509409 ALX4Q9H161 411 aaPredicted RBP11.95□□□□□ -0.5
TPM3-219ENST00000509409 GHITMQ9H3K2 345 aa11.95□□□□□ -0.5
TPM3-219ENST00000509409 MGAT4AQ9UM21 535 aa11.95□□□□□ -0.5
TPM3-219ENST00000509409 LSM2Q9Y333 95 aaKnown RBP11.95□□□□□ -0.5
TPM3-219ENST00000509409 TPRKBQ9Y3C4 175 aa11.95□□□□□ -0.5
TPM3-219ENST00000509409 AK6Q9Y3D8 172 aaKnown RBP11.95□□□□□ -0.5
TPM3-219ENST00000509409 OR5H14A6NHG9 310 aa11.94□□□□□ -0.5
TPM3-219ENST00000509409 ANKRD65E5RJM6 399 aa11.94□□□□□ -0.5
TPM3-219ENST00000509409 LINC01619G3V211 115 aa11.94□□□□□ -0.5
TPM3-219ENST00000509409 H0YJW9 148 aa11.94□□□□□ -0.5
TPM3-219ENST00000509409 OVOL1O14753 267 aa11.94□□□□□ -0.5
TPM3-219ENST00000509409 VEGFCP49767 419 aa11.94□□□□□ -0.5
TPM3-219ENST00000509409 RAB11BQ15907 218 aa11.94□□□□□ -0.5
TPM3-219ENST00000509409 ASPHD1Q5U4P2 390 aa11.94□□□□□ -0.5
TPM3-219ENST00000509409 ZNF429Q86V71 674 aa11.94□□□□□ -0.5
TPM3-219ENST00000509409 PPP1R27Q86WC6 154 aa11.94□□□□□ -0.5
TPM3-219ENST00000509409 CASTOR1Q8WTX7 329 aa11.94□□□□□ -0.5
TPM3-219ENST00000509409 PARP12Q9H0J9 701 aaKnown RBP11.94□□□□□ -0.5
TPM3-219ENST00000509409 C11orf54Q9H0W9 315 aaPredicted RBP11.94□□□□□ -0.5
TPM3-219ENST00000509409 LPAR5Q9H1C0 372 aa11.94□□□□□ -0.5
TPM3-219ENST00000509409 OR1A1Q9P1Q5 309 aa11.94□□□□□ -0.5
TPM3-219ENST00000509409 ZNF221Q9UK13 617 aa11.94□□□□□ -0.5
TPM3-219ENST00000509409 FOXA2Q9Y261 457 aaPredicted RBP11.94□□□□□ -0.5
TPM3-219ENST00000509409 WASHC3Q9Y3C0 194 aa11.94□□□□□ -0.5
TPM3-219ENST00000509409 TRBV6-6A0A0A6YYG2 114 aa11.93□□□□□ -0.5
TPM3-219ENST00000509409 SLC17A2O00624 439 aa11.93□□□□□ -0.5
TPM3-219ENST00000509409 ITGB1BP1O14713 200 aa11.93□□□□□ -0.5
TPM3-219ENST00000509409 SAP30O75446 220 aa11.93□□□□□ -0.5
TPM3-219ENST00000509409 RBBP9O75884 186 aa11.93□□□□□ -0.5
TPM3-219ENST00000509409 SCTP09683 121 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms