RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 A0A1B0GWJ7 208 aa12.39□□□□□ -0.43
PHF3-209ENST00000509330 GPR137BO60478 399 aa12.39□□□□□ -0.43
PHF3-209ENST00000509330 NFYBP25208 207 aa12.39□□□□□ -0.43
PHF3-209ENST00000509330 RPS16P62249 146 aaKnown RBP12.39□□□□□ -0.43
PHF3-209ENST00000509330 SRSF3P84103 164 aaKnown RBP12.39□□□□□ -0.43
PHF3-209ENST00000509330 TMEM267Q0VDI3 215 aaPredicted RBP12.39□□□□□ -0.43
PHF3-209ENST00000509330 HNF4GQ14541 408 aa12.39□□□□□ -0.43
PHF3-209ENST00000509330 SPINK9Q5DT21 86 aa12.39□□□□□ -0.43
PHF3-209ENST00000509330 ZNF645Q8N7E2 425 aa12.39□□□□□ -0.43
PHF3-209ENST00000509330 PLEKHA2Q9HB19 425 aa12.39□□□□□ -0.43
PHF3-209ENST00000509330 YLPM1P49750 1951 aaKnown RBP12.39□□□□□ -0.43
PHF3-209ENST00000509330 C17orf98A8MV24 154 aa12.39□□□□□ -0.43
PHF3-209ENST00000509330 DLL1O00548 723 aa12.39□□□□□ -0.43
PHF3-209ENST00000509330 TMPRSS2O15393 492 aa12.39□□□□□ -0.43
PHF3-209ENST00000509330 TNFSF4P23510 183 aa12.39□□□□□ -0.43
PHF3-209ENST00000509330 RNF141Q8WVD5 230 aa12.39□□□□□ -0.43
PHF3-209ENST00000509330 JKAMPQ9P055 326 aa12.39□□□□□ -0.43
PHF3-209ENST00000509330 DYSFO75923 2080 aa12.38□□□□□ -0.43
PHF3-209ENST00000509330 DOCK11Q5JSL3 2073 aa12.38□□□□□ -0.43
PHF3-209ENST00000509330 C15orf65H3BRN8 121 aa12.38□□□□□ -0.43
PHF3-209ENST00000509330 LIN7CQ9NUP9 197 aaKnown RBP12.38□□□□□ -0.43
PHF3-209ENST00000509330 IL19Q9UHD0 177 aa12.38□□□□□ -0.43
PHF3-209ENST00000509330 SVEP1Q4LDE5 3571 aa12.38□□□□□ -0.43
PHF3-209ENST00000509330 LINC00473A8K010 186 aa12.38□□□□□ -0.43
PHF3-209ENST00000509330 MGST3O14880 152 aa12.38□□□□□ -0.43
PHF3-209ENST00000509330 S1PR2O95136 353 aa12.38□□□□□ -0.43
PHF3-209ENST00000509330 LHBP01229 141 aa12.38□□□□□ -0.43
PHF3-209ENST00000509330 FAM157CP0CG43 387 aa12.38□□□□□ -0.43
PHF3-209ENST00000509330 IRF2P14316 349 aa12.38□□□□□ -0.43
PHF3-209ENST00000509330 P2RY1P47900 373 aa12.38□□□□□ -0.43
PHF3-209ENST00000509330 RPL39P5Q59GN2 51 aa12.38□□□□□ -0.43
PHF3-209ENST00000509330 SPAG16Q8N0X2 631 aa12.38□□□□□ -0.43
PHF3-209ENST00000509330 SNX22Q96L94 193 aa12.38□□□□□ -0.43
PHF3-209ENST00000509330 VKORC1Q9BQB6 163 aa12.38□□□□□ -0.43
PHF3-209ENST00000509330 PKD1L2Q7Z442 2459 aa12.37□□□□□ -0.43
PHF3-209ENST00000509330 K7N7A8 449 aa12.37□□□□□ -0.43
PHF3-209ENST00000509330 SLC31A2O15432 143 aa12.37□□□□□ -0.43
PHF3-209ENST00000509330 APOC3P02656 99 aa12.37□□□□□ -0.43
PHF3-209ENST00000509330 FGF2P09038 288 aa12.37□□□□□ -0.43
PHF3-209ENST00000509330 NDUFB7P17568 137 aa12.37□□□□□ -0.43
PHF3-209ENST00000509330 PVALBP20472 110 aaPredicted RBP12.37□□□□□ -0.43
PHF3-209ENST00000509330 UCNP55089 124 aa12.37□□□□□ -0.43
PHF3-209ENST00000509330 CASP6P55212 293 aa12.37□□□□□ -0.43
PHF3-209ENST00000509330 SSX9Q7RTT3 188 aa12.37□□□□□ -0.43
PHF3-209ENST00000509330 OR5C1Q8NGR4 320 aa12.37□□□□□ -0.43
PHF3-209ENST00000509330 OR10Z1Q8NGY1 313 aa12.37□□□□□ -0.43
PHF3-209ENST00000509330 AKR1E2Q96JD6 320 aa12.37□□□□□ -0.43
PHF3-209ENST00000509330 SAP30LQ9HAJ7 183 aa12.37□□□□□ -0.43
PHF3-209ENST00000509330 ZNRD1Q9P1U0 126 aa12.37□□□□□ -0.43
PHF3-209ENST00000509330 RBMXL2O75526 392 aaKnown RBP12.37□□□□□ -0.43
PHF3-209ENST00000509330 TAGLNQ01995 201 aaKnown RBP12.37□□□□□ -0.43
PHF3-209ENST00000509330 PXDC1Q5TGL8 231 aa12.37□□□□□ -0.43
PHF3-209ENST00000509330 TMEM252Q8N6L7 170 aa12.37□□□□□ -0.43
PHF3-209ENST00000509330 NUP37Q8NFH4 326 aa12.37□□□□□ -0.43
PHF3-209ENST00000509330 DYNLRB1Q9NP97 96 aa12.37□□□□□ -0.43
PHF3-209ENST00000509330 FAM96BQ9Y3D0 163 aa12.37□□□□□ -0.43
PHF3-209ENST00000509330 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.36□□□□□ -0.43
PHF3-209ENST00000509330 C17orf100A8MU93 164 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 TAAR5O14804 337 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 JTBO76095 146 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 CLDN14O95500 239 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 CLDN1O95832 211 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 GNG10P50151 68 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 ZNF134P52741 427 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 KLRB1Q12918 225 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 C3orf36Q3SXR2 165 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 AKAP6Q13023 2319 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 DYNLT3P51808 116 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 ZNF616Q08AN1 781 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 BPIFCQ8NFQ6 507 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 PPP1R35Q8TAP8 253 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 RAI1Q7Z5J4 1906 aaPredicted RBP12.36□□□□□ -0.43
PHF3-209ENST00000509330 E7EQL1 145 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 TXNL1O43396 289 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 GPR12P47775 334 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 BRWD1-AS2P59051 145 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 RUNX1Q01196 453 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 ID3Q02535 119 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 Q6ZRG5 221 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 ODF3L1Q8IXM7 274 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 VKORC1L1Q8N0U8 176 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 LURAP1Q96LR2 239 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 CALYQ9NYX4 217 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 LPAR3Q9UBY5 353 aa12.36□□□□□ -0.43
PHF3-209ENST00000509330 A8MXK9 166 aa12.35□□□□□ -0.43
PHF3-209ENST00000509330 TMEM182Q6ZP80 229 aaPredicted RBP12.35□□□□□ -0.43
PHF3-209ENST00000509330 GAFA1Q96PS6 74 aa12.35□□□□□ -0.43
PHF3-209ENST00000509330 LYNX1G3V0Z9 82 aa12.35□□□□□ -0.43
PHF3-209ENST00000509330 NUPL2O15504 423 aaKnown RBP12.35□□□□□ -0.43
PHF3-209ENST00000509330 MMP23AO75900 390 aa12.35□□□□□ -0.43
PHF3-209ENST00000509330 LYNX1P0DP58 116 aa12.35□□□□□ -0.43
PHF3-209ENST00000509330 AGMATQ9BSE5 352 aa12.35□□□□□ -0.43
PHF3-209ENST00000509330 KCNJ16Q9NPI9 418 aa12.35□□□□□ -0.43
PHF3-209ENST00000509330 LYRM2Q9NU23 88 aaPredicted RBP12.35□□□□□ -0.43
PHF3-209ENST00000509330 ZFP57Q9NU63 452 aa12.35□□□□□ -0.43
PHF3-209ENST00000509330 SHISA9B4DS77 424 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 M0R1X1 148 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 FGF16O43320 207 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 PRH1P02810 166 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 METTL15P1P0C7V9 234 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms