RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 ZNF880Q6PDB4 577 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 HEPN1Q6WQI6 88 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 C6orf201Q7Z4U5 140 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 TRAPPC6BQ86SZ2 158 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 RTN4RL2Q86UN3 420 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 BPIFB2Q8N4F0 458 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 MAPK1IP1LQ8NDC0 245 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 OR4M1Q8NGD0 313 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 MCFD2Q8NI22 146 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 NANPQ8TBE9 248 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 PLPPR1Q8TBJ4 325 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 MRPL30Q8TCC3 161 aaKnown RBP4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 FAM216AQ8WUB2 273 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 TNFRSF14Q92956 283 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 CREB3L1Q96BA8 519 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 UPRTQ96BW1 309 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 CMSS1Q9BQ75 279 aaKnown RBP4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 FAAP24Q9BTP7 215 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 C6orf62Q9GZU0 229 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 SIRPDQ9H106 197 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 GHITMQ9H3K2 345 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 KCNK15Q9H427 330 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 AUNIPQ9H7T9 357 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 METTL8Q9H825 291 aaKnown RBP4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 SCPEP1Q9HB40 452 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 C12orf4Q9NQ89 552 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 MMP26Q9NRE1 261 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 C19orf12Q9NSK7 152 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 KIF25Q9UIL4 384 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 SESN1Q9Y6P5 492 aa4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 TEP1Q99973 2627 aaKnown RBP4.48□□□□□ -1.69
HMGB1P44-201ENST00000508597 TRAV18A0A075B6X5 111 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 A0A087X0M5 115 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 A0A1B0GX30 115 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 LINC01548A6NM66 108 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 HSPB6O14558 160 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 CTDSP2O14595 271 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 ITGB1BP1O14713 200 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 RRHO14718 337 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 CTDSPLO15194 276 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 HPGDSO60760 199 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 RGS11O94810 467 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 LY6G6DO95868 133 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 TFF1P04155 84 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 CTXN2P0C2S0 81 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 IGHV1-8P0DP01 117 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 LYL1P12980 280 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 MMP9P14780 707 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 GNB3P16520 340 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 ELK1P19419 428 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 CD34P28906 385 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 PRSS3P35030 304 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 UBE2E1P51965 193 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 DLX6P56179 175 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 TAS2R20P59543 309 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 GNG2P59768 71 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 ARF6P62330 175 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 HTD2P86397 168 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 SSBP1Q04837 148 aaKnown RBP4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 PLA2G7Q13093 441 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 ZNF273Q14593 569 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 HMGN3Q15651 99 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 BAK1Q16611 211 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 MOGAT2Q3SYC2 334 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 ANXA2RQ3ZCQ2 193 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 GPR157Q5UAW9 335 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 FAHD2BQ6P2I3 314 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 C11orf42Q8N5U0 333 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 C8orf31Q8N9H6 132 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 OR4A4PQ8NGN8 299 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 OR13D1Q8NGV5 346 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 ARL11Q969Q4 196 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 GALMQ96C23 342 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 FAHD2AQ96GK7 314 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 DIRAS2Q96HU8 199 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 DCUN1D5Q9BTE7 237 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 ABHD14AQ9BUJ0 271 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 QTRT1Q9BXR0 403 aaKnown RBP4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 TOLLIPQ9H0E2 274 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 ZNF286AQ9HBT8 521 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 LPAR2Q9HBW0 351 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 CHMP1AQ9HD42 196 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 Q9N2K0 584 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 YAE1D1Q9NRH1 226 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 CALYQ9NYX4 217 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 ONECUT1Q9UBC0 465 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 EXTL2Q9UBQ6 330 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 ZNF107Q9UII5 783 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 AK3Q9UIJ7 227 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 KCNK7Q9Y2U2 307 aa4.47□□□□□ -1.69
HMGB1P44-201ENST00000508597 SVEP1Q4LDE5 3571 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 TMEM235A6NFC5 223 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 TRDCB7Z8K6 153 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 C15orf65H3BRN8 121 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 GABARAPH6UMI1 98 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 YPEL1O60688 119 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 HLA-DQB1P01920 261 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 HBZP02008 142 aa4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 EIF4EP06730 217 aaKnown RBP4.46□□□□□ -1.7
HMGB1P44-201ENST00000508597 FCGR3AP08637 254 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms