RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 PPCDCQ96CD2 204 aa1.7□□□□□ -2.14
HMGB1P28-201ENST00000507778 TBX5Q99593 518 aa1.7□□□□□ -2.14
HMGB1P28-201ENST00000507778 ZNF426Q9BUY5 554 aa1.7□□□□□ -2.14
HMGB1P28-201ENST00000507778 GNB1LQ9BYB4 327 aa1.7□□□□□ -2.14
HMGB1P28-201ENST00000507778 PARVAQ9NVD7 372 aa1.7□□□□□ -2.14
HMGB1P28-201ENST00000507778 EURLQ9NYK6 297 aa1.7□□□□□ -2.14
HMGB1P28-201ENST00000507778 SNX12Q9UMY4 172 aa1.7□□□□□ -2.14
HMGB1P28-201ENST00000507778 CCL26Q9Y258 94 aa1.7□□□□□ -2.14
HMGB1P28-201ENST00000507778 RAD50Q92878 1312 aa1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 RIMS2Q9UQ26 1411 aa1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 VPS37CA5D8V6 355 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 FABP12A6NFH5 140 aa1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 HPGDSO60760 199 aa1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 YEATS4O95619 227 aa1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 CD7P09564 240 aa1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 GABRA4P48169 554 aa1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 CLDN12P56749 244 aa1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 KRTAP12-4P60329 112 aa1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 ATP5L2Q7Z4Y8 100 aa1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 MBOAT7Q96N66 472 aa1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 CDCA4Q9BXL8 241 aa1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 MROQ9BYG7 248 aa1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 UPF3BQ9BZI7 483 aaKnown RBP1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 C11orf1Q9H5F2 150 aa1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 TMEM106BQ9NUM4 274 aa1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 TXNL4BQ9NX01 149 aaKnown RBP1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 PSORS1C2Q9UIG4 136 aa1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 HHLA2Q9UM44 414 aa1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 TP53TG1Q9Y2A0 90 aa1.69□□□□□ -2.14
HMGB1P28-201ENST00000507778 IGHV3-73A0A0B4J1V6 119 aa1.68□□□□□ -2.14
HMGB1P28-201ENST00000507778 UBFD1O14562 309 aaKnown RBP1.68□□□□□ -2.14
HMGB1P28-201ENST00000507778 ZNF189O75820 626 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P28-201ENST00000507778 HIST1H1CP16403 213 aaKnown RBP1.68□□□□□ -2.14
HMGB1P28-201ENST00000507778 NPPCP23582 126 aa1.68□□□□□ -2.14
HMGB1P28-201ENST00000507778 CD200P41217 278 aa1.68□□□□□ -2.14
HMGB1P28-201ENST00000507778 PSMD8P48556 350 aa1.68□□□□□ -2.14
HMGB1P28-201ENST00000507778 TSPEAR-AS2P59090 65 aa1.68□□□□□ -2.14
HMGB1P28-201ENST00000507778 LCN8Q6JVE9 175 aa1.68□□□□□ -2.14
HMGB1P28-201ENST00000507778 DNM1P34Q6PK57 102 aa1.68□□□□□ -2.14
HMGB1P28-201ENST00000507778 DRAM2Q6UX65 266 aa1.68□□□□□ -2.14
HMGB1P28-201ENST00000507778 CD302Q8IX05 232 aa1.68□□□□□ -2.14
HMGB1P28-201ENST00000507778 RIBC1Q8N443 379 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P28-201ENST00000507778 FNDC9Q8TBE3 224 aa1.68□□□□□ -2.14
HMGB1P28-201ENST00000507778 C16orf78Q8WTQ4 265 aa1.68□□□□□ -2.14
HMGB1P28-201ENST00000507778 C16orf95Q9H693 158 aa1.68□□□□□ -2.14
HMGB1P28-201ENST00000507778 SPANXB1Q9NS25 103 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P28-201ENST00000507778 SAMHD1Q9Y3Z3 626 aaKnown RBP1.68□□□□□ -2.14
HMGB1P28-201ENST00000507778 MINOS1-NBL1R4GNA1 71 aa1.68□□□□□ -2.14
HMGB1P28-201ENST00000507778 NLRC5Q86WI3 1866 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 GRIFINA4D1Z8 144 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 C19orf71A6NCJ1 209 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 KNCNA6PVL3 124 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 MRASO14807 208 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 AZIN1O14977 448 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 ATP8B1O43520 1251 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 PSMG1O95456 288 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 ATP5G1P05496 136 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 P0DMU3 169 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 FAM231AP0DMU4 169 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 FAM231CP0DMU5 169 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 CRHBPP24387 322 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 CD40LGP29965 261 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 MIPP30301 263 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 DAPP51397 102 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 TAS2R45P59539 299 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 HERVK_113P63121 156 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 TMEM267Q0VDI3 215 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 FAM9CQ8IZT9 166 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 Q8NDZ9 215 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 SLC37A2Q8TED4 501 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 DNAJB3Q8WWF6 145 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 DNAJC30Q96LL9 226 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 TIPINQ9BVW5 301 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 SLC22A4Q9H015 551 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 IMP3Q9NV31 184 aaKnown RBP1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 FAM206AQ9NX38 181 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 PSMD13Q9UNM6 376 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 HDGFL3Q9Y3E1 203 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 ADAMTSL1Q8N6G6 1762 aa1.67□□□□□ -2.14
HMGB1P28-201ENST00000507778 SHANK3Q9BYB0 1731 aa1.66□□□□□ -2.14
HMGB1P28-201ENST00000507778 TRAV8-1A0A0A6YYK1 113 aa1.66□□□□□ -2.14
HMGB1P28-201ENST00000507778 LY6LH3BQJ8 138 aa1.66□□□□□ -2.14
HMGB1P28-201ENST00000507778 CETN3O15182 167 aa1.66□□□□□ -2.14
HMGB1P28-201ENST00000507778 GSTZ1O43708 216 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P28-201ENST00000507778 OR10J1P30954 320 aa1.66□□□□□ -2.14
HMGB1P28-201ENST00000507778 CD79BP40259 229 aa1.66□□□□□ -2.14
HMGB1P28-201ENST00000507778 CA7P43166 264 aa1.66□□□□□ -2.14
HMGB1P28-201ENST00000507778 MAP3K7CLP57077 242 aa1.66□□□□□ -2.14
HMGB1P28-201ENST00000507778 HPCAP84074 193 aa1.66□□□□□ -2.14
HMGB1P28-201ENST00000507778 FAM19A5Q7Z5A7 132 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P28-201ENST00000507778 OR10D3Q8NH80 312 aa1.66□□□□□ -2.14
HMGB1P28-201ENST00000507778 Q8WTZ3 238 aa1.66□□□□□ -2.14
HMGB1P28-201ENST00000507778 DHRS9Q9BPW9 319 aa1.66□□□□□ -2.14
HMGB1P28-201ENST00000507778 NSRP1Q9H0G5 558 aaKnown RBP1.66□□□□□ -2.14
HMGB1P28-201ENST00000507778 MS4A6AQ9H2W1 248 aa1.66□□□□□ -2.14
HMGB1P28-201ENST00000507778 OR51B6Q9H340 312 aa1.66□□□□□ -2.14
HMGB1P28-201ENST00000507778 SLIT2O94813 1529 aa1.66□□□□□ -2.14
HMGB1P28-201ENST00000507778 A0A1W2PP64 1363 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 C1orf232A0A0U1RR37 186 aa1.65□□□□□ -2.15
HMGB1P28-201ENST00000507778 A0A1W2PQL4 384 aaPredicted RBP1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms